| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609624
Identifier: 86609624
GI number: 86609624
Start: 2284389
End: 2285123
Strand: Reverse
Name: 86609624
Synonym: CYB_2178
Alternate gene names: NA
Gene position: 2285123-2284389 (Counterclockwise)
Preceding gene: 86609625
Following gene: 86609623
Centisome position: 75.0
GC content: 51.7
Gene sequence:
>735_bases ATGCGGCAACAAAACGCTATTCCGCTTGGAGGCGACTGTTTGGAACTGGGCGAGGCCAACTGGTACGGCGACGTGGCTGT CGAGCAGCTTGGCCAAGACATTTATCGCTTTGCCAAAGAGGAAGAACGTACTGCCCTCTTCCGTCAACTTGATGAAATTA CTCAGGCTAAGCGCCCTGGAATGCTGTTCGAGATCGCCAAGGTCTTTTGGCGCACCTTCTGGCAGCCACGTTCGATGACA GCGGTGGATCTTCATGGCACGGAGGCAGCTCTCAAGCTGGATCTCAATTTCCCTATCGAGTTGCCTCAGCGTTACCATGC TGTTTTTAACCTTGGCACAGCCGAGCACATCTTCAATATTGCCCAGGTGATGAAAACCATACACGACTACACGCTGCCTG GTGGCCTAATGATCCACGGTCTGCCATTTACCGGCTGGCTCGATCACGGTTTTTACAACGTGCAGCCGACCTTTTTCTGG GATCTAGCCCAGGCAAACAGCTACACGATAATGGCCTATCTCTACGTCGAGTATAATCCACTGAAGTTCGTACAGCTATG GAAACGCGAGGATATCCTCGAACTGGTCACTAAAAACCAGATTGGCCAAAACGCCTTGCTTTACTGTGTTCTGCGCAAGC CTGCTGAAGATCAACCGTTTTGCTTTCCGATTCAGGGCTACTATGCCGGCACTCTCTCCCAGGAGGCAGCAGAGGCTTGG AAGACTTTACGATAA
Upstream 100 bases:
>100_bases ACAACCGTCTGCAGGTAGAGCCATGCCGCCGCTGCAACTTCCTTTAAACAAGGAGAGATCCATGGCTATCACTGCCATCG AATACGTTCTATTTAGCCAA
Downstream 100 bases:
>100_bases GCGAGGGTGAAAATGAAGCGACTCAAGGAGCAATTTGCAGACAAAGCTAGCGCTGGAGTTGCTTGTGCCACGCATGCCAA AGGGAGCTGTGATCTTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MRQQNAIPLGGDCLELGEANWYGDVAVEQLGQDIYRFAKEEERTALFRQLDEITQAKRPGMLFEIAKVFWRTFWQPRSMT AVDLHGTEAALKLDLNFPIELPQRYHAVFNLGTAEHIFNIAQVMKTIHDYTLPGGLMIHGLPFTGWLDHGFYNVQPTFFW DLAQANSYTIMAYLYVEYNPLKFVQLWKREDILELVTKNQIGQNALLYCVLRKPAEDQPFCFPIQGYYAGTLSQEAAEAW KTLR
Sequences:
>Translated_244_residues MRQQNAIPLGGDCLELGEANWYGDVAVEQLGQDIYRFAKEEERTALFRQLDEITQAKRPGMLFEIAKVFWRTFWQPRSMT AVDLHGTEAALKLDLNFPIELPQRYHAVFNLGTAEHIFNIAQVMKTIHDYTLPGGLMIHGLPFTGWLDHGFYNVQPTFFW DLAQANSYTIMAYLYVEYNPLKFVQLWKREDILELVTKNQIGQNALLYCVLRKPAEDQPFCFPIQGYYAGTLSQEAAEAW KTLR >Mature_244_residues MRQQNAIPLGGDCLELGEANWYGDVAVEQLGQDIYRFAKEEERTALFRQLDEITQAKRPGMLFEIAKVFWRTFWQPRSMT AVDLHGTEAALKLDLNFPIELPQRYHAVFNLGTAEHIFNIAQVMKTIHDYTLPGGLMIHGLPFTGWLDHGFYNVQPTFFW DLAQANSYTIMAYLYVEYNPLKFVQLWKREDILELVTKNQIGQNALLYCVLRKPAEDQPFCFPIQGYYAGTLSQEAAEAW KTLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28236; Mature: 28236
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQQNAIPLGGDCLELGEANWYGDVAVEQLGQDIYRFAKEEERTALFRQLDEITQAKRPG CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MLFEIAKVFWRTFWQPRSMTAVDLHGTEAALKLDLNFPIELPQRYHAVFNLGTAEHIFNI HHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHH AQVMKTIHDYTLPGGLMIHGLPFTGWLDHGFYNVQPTFFWDLAQANSYTIMAYLYVEYNP HHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEEEEEEEEECC LKFVQLWKREDILELVTKNQIGQNALLYCVLRKPAEDQPFCFPIQGYYAGTLSQEAAEAW HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHH KTLR HCCC >Mature Secondary Structure MRQQNAIPLGGDCLELGEANWYGDVAVEQLGQDIYRFAKEEERTALFRQLDEITQAKRPG CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MLFEIAKVFWRTFWQPRSMTAVDLHGTEAALKLDLNFPIELPQRYHAVFNLGTAEHIFNI HHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHH AQVMKTIHDYTLPGGLMIHGLPFTGWLDHGFYNVQPTFFWDLAQANSYTIMAYLYVEYNP HHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEEEEEEEEECC LKFVQLWKREDILELVTKNQIGQNALLYCVLRKPAEDQPFCFPIQGYYAGTLSQEAAEAW HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHH KTLR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA