| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is treY [H]
Identifier: 86609605
GI number: 86609605
Start: 2257472
End: 2260273
Strand: Reverse
Name: treY [H]
Synonym: CYB_2158
Alternate gene names: 86609605
Gene position: 2260273-2257472 (Counterclockwise)
Preceding gene: 86609609
Following gene: 86609603
Centisome position: 74.19
GC content: 50.68
Gene sequence:
>2802_bases ATGCGGATCCCGACTTCCACCTATCGCATTCAGTTTCATGCTGGGTTTGACTTCGACGCAGCACGACAGATTGTTCCCTA CCTGAAGTTGCTGGGCATCAGTGACTTGTATGCCTCTCCCATCTTCCAAGCCCGCAAAGGCAGCACCCACGGCTACGACG TGGTGGATCCCAGGCAGATTAACCAGGAACTGGGGGGAAGCGAAAAGTTTGAGCTCTTGTGGGAAGCCCTCAATCAGCAG GGAATAGGCTGGATCCAGGACATTGTGCCCAATCACATGGCCTACGATGGCCAGAACCAGATGCTCATGGATGTTCTGGA GAGTGGCCCCAACTCAGATTTTGTTGACTACTTTGATGTGAATTGGAATCACTCTTACCTGGGGATCAAAGGCAGAATCT TAGCCCCTTTCTTGGGAGATTTCTACGACAAATGTTTGGAGTCGGGTCAAATCCAGCTTCGTTATGATGCCGATGGCCTA AGTATTAACTACTACAACTTGAGGTTCCCCCTCAATATTGACACCTATGCGGATGTTTTTACCTACAACCTGAGCAAACT GCGGCGAAAATTGGGACGCAGCCATCCCGACTACGTCAAGTTACTCGGGATCCTCTTCAGCCTGAAATTCATTCCCAGCA AGGAAGATCTCCTAGAGCGCACCGATCAAATTAGCTTTGCCAAGCATTCGTTGTGGGAACTCTACACTTCTAGCCAACCT ATCCAGAGCTTTTTTGACGAGAACATTGCCATTTTTAACGGCAAGCCAGGGGATCCGTCAAGCTTTGACCTGCTGGATAG TCTTCTGGCGCGGCAACATTTCCGCCTTTCCTTCTGGAAGGTGGGTGCTGAGGAGATCAATTATCGTCGTTTCTTTACCA TTAACGAGCTGATCTCGCTGCGGGTAGAAGATCGCGAAGTGTTTCGCAAAACCCATCAGCTTATCTTTAAGCTTGCAGAA CAGGGACGATTTAATGGTTTGCGCATCGATCATATCGATGGGTTGTTCAATCCCGAAGAGTATCTCCATCGCCTGCGGGA ACGCTGCCCAAATCTTTACATCGTGGTGGAGAAAATACTAGAGGCCAATGAAAGTCTGCCCCAAAGCTGGCCGGTTCAGG GCACAACGGGTTACGATTTTTTGGCTAAGCTCAACGGCATCTTTTGTCAAGAAGAAAATGCGGAGGCTTTTGACTCTCTC TATCAAAATTTCACAAATCTACGGCATTCCCCAGAGCAGGTTATCGAAGATAAAAAACGCCTGATCATCGAGCGCAACCT GTCAGGAGATATGGATAACCTTGCTTTTTTGCTCAAACAGATCACCAGCCACCATCGCTATGCCAATGACTTTACCCTCT ACAGTTTACGTCGAGCTTTGGTAGAAGTTTTGGTGTGCTTTCCGGTCTACCGCGTCTATATCCACGAAGGGATCCTCAGT CCAGAAGGTCAACAGGTGGTTCGTCAAGCTGTGGAGAAGGCCAAGGAGAACCTGCCCGTTTTGGTGAATGAGCTGAATTT TATTCAGCGCTTTCTCTGCCTGGAGTCTCTGGAAAATTTATCAGACCAGGAGAAAAATGAGCAGATCCATTTTGCCATGC GCTTGCAGCAGTTGGCCGGCCCTCTCATGGCCAAAGGGGTAGAAGATACTGCTTTTTATGTGTACAACCGCCTTTTATCT CTCAATGAAGTCGGCGGGGATCCCTGTCGCTTTGGCCTTTCGGTGCAAGAGTTTCACCGCTTTAATCAAGAGCGGTCAGC TCGGTGGCCTCTGTCCATGAATGCTTCTGCCACCCACGACACCAAGCGTGGCGAAGATGTGCGGGCCCGGCTGAATGTGC TTTCTGAAATCCCCGCCGAGTGGGAAAAGCACATCAATCTTTGGCATGAGCTGAACCTCGGCTACAAAGTCCGCAGCAAA CAAGCTAAGCGCTCGGAACTGCCGGATCGCAATGACGAGTATTTGCTCTACCAGACATTGCTCGGCTCTTATCCCTTCCA ACCGGAAGAGGTGCCCCAGTTTGTACAGCGGGTCAAAGATTATGCCATCAAAGCAGTGCGGGAAGCTAAGGTCCACACCG CTTGGCTTCGCCCCGATACCGAGTACGAAGAAGCCACTACCGCTTTTATCGAACGGATCCTTCAAGGTCCTAACCCCTTT TTGGAGTCCTTTTTGCCTTTCCAACGGAAAGTTGCTCACTTTGGCATTTTTAATTCTCTCTCACAGACGCTGATCAAACT GACCAGCCCTGGGATCCCGGATATTTACCAAGGCACGGAACTGTGGGATTTGAGCATGGTGGATCCCGACAATCGTCGGC CTGTGGATTTTTCCCGTCGCCTCGCCTATTTGGAAGAAATTCAGCGGCGGGTTAAACAGGATCCTCTCCAACTCATTGCG GATTTGCTCCTGCACCGCAGCGACGGACGCATTAAGCTGTTTCTGATTTACCACGTGCTCAAGGCCCGCCAGGAACAGCC CCAATTGTTTCTCGAGGGCAGCTACATTCCTCTGCAAATCAGCGGATCCCATGCTGACCATGTTGTGGCTTTTGCCCGTC AGCACAGTAAGCAGGTATTGCTCACGGTAGTGCCGCGTTTTTTAACAAAGTTGATCGACGAAACCCAAGATCCTCTGGGA GAATCCGTTTGGGCAGATACCGAAATTCATCTGCCGCGTTGGAAGCGGCTGGACTGGGTGAATGGGCTAACCCAGGAAAG GATCCCTGCCGGCGAAACCTTGCCGGTGGGCGTTGTCTTGAAATCCTTCCCGGTGGCCCTGCTGTGGGGACAATCCCGCT AG
Upstream 100 bases:
>100_bases GCAGGACTCCTTGATCTTAGCCGCTACCCTAGATACATCTGTTCTCTTGACCCTATGCCGTTGACAAGCTCGGCTTCTTT GTCATTGTTCTAAGGTCATC
Downstream 100 bases:
>100_bases CGGCCTAGGCGGGAGCTAGGGCCTGAAAGTTGACGATGCGGGCAAACTCTTGGGGGTCTAGGCTGGCCCCTCCCACCAAC ACGCCGTCGATCTCAGGCTG
Product: malto-oligosyltrehalose synthase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 933; Mature: 933
Protein sequence:
>933_residues MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINQELGGSEKFELLWEALNQQ GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDVNWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGL SINYYNLRFPLNIDTYADVFTYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISLRVEDREVFRKTHQLIFKLAE QGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKILEANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSL YQNFTNLRHSPEQVIEDKKRLIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS LNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHDTKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSK QAKRSELPDRNDEYLLYQTLLGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRVKQDPLQLIA DLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQISGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLG ESVWADTEIHLPRWKRLDWVNGLTQERIPAGETLPVGVVLKSFPVALLWGQSR
Sequences:
>Translated_933_residues MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINQELGGSEKFELLWEALNQQ GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDVNWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGL SINYYNLRFPLNIDTYADVFTYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISLRVEDREVFRKTHQLIFKLAE QGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKILEANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSL YQNFTNLRHSPEQVIEDKKRLIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS LNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHDTKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSK QAKRSELPDRNDEYLLYQTLLGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRVKQDPLQLIA DLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQISGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLG ESVWADTEIHLPRWKRLDWVNGLTQERIPAGETLPVGVVLKSFPVALLWGQSR >Mature_933_residues MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINQELGGSEKFELLWEALNQQ GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDVNWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGL SINYYNLRFPLNIDTYADVFTYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISLRVEDREVFRKTHQLIFKLAE QGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKILEANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSL YQNFTNLRHSPEQVIEDKKRLIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS LNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHDTKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSK QAKRSELPDRNDEYLLYQTLLGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRVKQDPLQLIA DLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQISGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLG ESVWADTEIHLPRWKRLDWVNGLTQERIPAGETLPVGVVLKSFPVALLWGQSR
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 108323; Mature: 108323
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQI CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCHHHH NQELGGSEKFELLWEALNQQGIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDV HHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCHHEECCCHHHHHHHHHCCCCCCCCEEEEC NWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGLSINYYNLRFPLNIDTYADVF CCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHH TYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISL HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEHHHHHHH RVEDREVFRKTHQLIFKLAEQGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKIL CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH EANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSLYQNFTNLRHSPEQVIEDKKR HHCCCCCCCCCCCCCCCHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAG CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH PLMAKGVEDTAFYVYNRLLSLNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHD HHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCHHCCCCCCEECCCCCCCC TKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSKQAKRSELPDRNDEYLLYQTL CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCEEHHHHH LGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHH LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH LAYLEEIQRRVKQDPLQLIADLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQI HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEE SGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLGESVWADTEIHLPRWKRLDWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCCCHHHHHHH NGLTQERIPAGETLPVGVVLKSFPVALLWGQSR CCCCHHCCCCCCCCHHHHHHHHCCEEEEECCCC >Mature Secondary Structure MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQI CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCHHHH NQELGGSEKFELLWEALNQQGIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDV HHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCHHEECCCHHHHHHHHHCCCCCCCCEEEEC NWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGLSINYYNLRFPLNIDTYADVF CCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHH TYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISL HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEHHHHHHH RVEDREVFRKTHQLIFKLAEQGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKIL CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH EANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSLYQNFTNLRHSPEQVIEDKKR HHCCCCCCCCCCCCCCCHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAG CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH PLMAKGVEDTAFYVYNRLLSLNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHD HHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCHHCCCCCCEECCCCCCCC TKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSKQAKRSELPDRNDEYLLYQTL CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCEEHHHHH LGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHH LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH LAYLEEIQRRVKQDPLQLIADLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQI HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEE SGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLGESVWADTEIHLPRWKRLDWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCCCHHHHHHH NGLTQERIPAGETLPVGVVLKSFPVALLWGQSR CCCCHHCCCCCCCCHHHHHHHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]