Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is treY [H]

Identifier: 86609605

GI number: 86609605

Start: 2257472

End: 2260273

Strand: Reverse

Name: treY [H]

Synonym: CYB_2158

Alternate gene names: 86609605

Gene position: 2260273-2257472 (Counterclockwise)

Preceding gene: 86609609

Following gene: 86609603

Centisome position: 74.19

GC content: 50.68

Gene sequence:

>2802_bases
ATGCGGATCCCGACTTCCACCTATCGCATTCAGTTTCATGCTGGGTTTGACTTCGACGCAGCACGACAGATTGTTCCCTA
CCTGAAGTTGCTGGGCATCAGTGACTTGTATGCCTCTCCCATCTTCCAAGCCCGCAAAGGCAGCACCCACGGCTACGACG
TGGTGGATCCCAGGCAGATTAACCAGGAACTGGGGGGAAGCGAAAAGTTTGAGCTCTTGTGGGAAGCCCTCAATCAGCAG
GGAATAGGCTGGATCCAGGACATTGTGCCCAATCACATGGCCTACGATGGCCAGAACCAGATGCTCATGGATGTTCTGGA
GAGTGGCCCCAACTCAGATTTTGTTGACTACTTTGATGTGAATTGGAATCACTCTTACCTGGGGATCAAAGGCAGAATCT
TAGCCCCTTTCTTGGGAGATTTCTACGACAAATGTTTGGAGTCGGGTCAAATCCAGCTTCGTTATGATGCCGATGGCCTA
AGTATTAACTACTACAACTTGAGGTTCCCCCTCAATATTGACACCTATGCGGATGTTTTTACCTACAACCTGAGCAAACT
GCGGCGAAAATTGGGACGCAGCCATCCCGACTACGTCAAGTTACTCGGGATCCTCTTCAGCCTGAAATTCATTCCCAGCA
AGGAAGATCTCCTAGAGCGCACCGATCAAATTAGCTTTGCCAAGCATTCGTTGTGGGAACTCTACACTTCTAGCCAACCT
ATCCAGAGCTTTTTTGACGAGAACATTGCCATTTTTAACGGCAAGCCAGGGGATCCGTCAAGCTTTGACCTGCTGGATAG
TCTTCTGGCGCGGCAACATTTCCGCCTTTCCTTCTGGAAGGTGGGTGCTGAGGAGATCAATTATCGTCGTTTCTTTACCA
TTAACGAGCTGATCTCGCTGCGGGTAGAAGATCGCGAAGTGTTTCGCAAAACCCATCAGCTTATCTTTAAGCTTGCAGAA
CAGGGACGATTTAATGGTTTGCGCATCGATCATATCGATGGGTTGTTCAATCCCGAAGAGTATCTCCATCGCCTGCGGGA
ACGCTGCCCAAATCTTTACATCGTGGTGGAGAAAATACTAGAGGCCAATGAAAGTCTGCCCCAAAGCTGGCCGGTTCAGG
GCACAACGGGTTACGATTTTTTGGCTAAGCTCAACGGCATCTTTTGTCAAGAAGAAAATGCGGAGGCTTTTGACTCTCTC
TATCAAAATTTCACAAATCTACGGCATTCCCCAGAGCAGGTTATCGAAGATAAAAAACGCCTGATCATCGAGCGCAACCT
GTCAGGAGATATGGATAACCTTGCTTTTTTGCTCAAACAGATCACCAGCCACCATCGCTATGCCAATGACTTTACCCTCT
ACAGTTTACGTCGAGCTTTGGTAGAAGTTTTGGTGTGCTTTCCGGTCTACCGCGTCTATATCCACGAAGGGATCCTCAGT
CCAGAAGGTCAACAGGTGGTTCGTCAAGCTGTGGAGAAGGCCAAGGAGAACCTGCCCGTTTTGGTGAATGAGCTGAATTT
TATTCAGCGCTTTCTCTGCCTGGAGTCTCTGGAAAATTTATCAGACCAGGAGAAAAATGAGCAGATCCATTTTGCCATGC
GCTTGCAGCAGTTGGCCGGCCCTCTCATGGCCAAAGGGGTAGAAGATACTGCTTTTTATGTGTACAACCGCCTTTTATCT
CTCAATGAAGTCGGCGGGGATCCCTGTCGCTTTGGCCTTTCGGTGCAAGAGTTTCACCGCTTTAATCAAGAGCGGTCAGC
TCGGTGGCCTCTGTCCATGAATGCTTCTGCCACCCACGACACCAAGCGTGGCGAAGATGTGCGGGCCCGGCTGAATGTGC
TTTCTGAAATCCCCGCCGAGTGGGAAAAGCACATCAATCTTTGGCATGAGCTGAACCTCGGCTACAAAGTCCGCAGCAAA
CAAGCTAAGCGCTCGGAACTGCCGGATCGCAATGACGAGTATTTGCTCTACCAGACATTGCTCGGCTCTTATCCCTTCCA
ACCGGAAGAGGTGCCCCAGTTTGTACAGCGGGTCAAAGATTATGCCATCAAAGCAGTGCGGGAAGCTAAGGTCCACACCG
CTTGGCTTCGCCCCGATACCGAGTACGAAGAAGCCACTACCGCTTTTATCGAACGGATCCTTCAAGGTCCTAACCCCTTT
TTGGAGTCCTTTTTGCCTTTCCAACGGAAAGTTGCTCACTTTGGCATTTTTAATTCTCTCTCACAGACGCTGATCAAACT
GACCAGCCCTGGGATCCCGGATATTTACCAAGGCACGGAACTGTGGGATTTGAGCATGGTGGATCCCGACAATCGTCGGC
CTGTGGATTTTTCCCGTCGCCTCGCCTATTTGGAAGAAATTCAGCGGCGGGTTAAACAGGATCCTCTCCAACTCATTGCG
GATTTGCTCCTGCACCGCAGCGACGGACGCATTAAGCTGTTTCTGATTTACCACGTGCTCAAGGCCCGCCAGGAACAGCC
CCAATTGTTTCTCGAGGGCAGCTACATTCCTCTGCAAATCAGCGGATCCCATGCTGACCATGTTGTGGCTTTTGCCCGTC
AGCACAGTAAGCAGGTATTGCTCACGGTAGTGCCGCGTTTTTTAACAAAGTTGATCGACGAAACCCAAGATCCTCTGGGA
GAATCCGTTTGGGCAGATACCGAAATTCATCTGCCGCGTTGGAAGCGGCTGGACTGGGTGAATGGGCTAACCCAGGAAAG
GATCCCTGCCGGCGAAACCTTGCCGGTGGGCGTTGTCTTGAAATCCTTCCCGGTGGCCCTGCTGTGGGGACAATCCCGCT
AG

Upstream 100 bases:

>100_bases
GCAGGACTCCTTGATCTTAGCCGCTACCCTAGATACATCTGTTCTCTTGACCCTATGCCGTTGACAAGCTCGGCTTCTTT
GTCATTGTTCTAAGGTCATC

Downstream 100 bases:

>100_bases
CGGCCTAGGCGGGAGCTAGGGCCTGAAAGTTGACGATGCGGGCAAACTCTTGGGGGTCTAGGCTGGCCCCTCCCACCAAC
ACGCCGTCGATCTCAGGCTG

Product: malto-oligosyltrehalose synthase

Products: NA

Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]

Number of amino acids: Translated: 933; Mature: 933

Protein sequence:

>933_residues
MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINQELGGSEKFELLWEALNQQ
GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDVNWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGL
SINYYNLRFPLNIDTYADVFTYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP
IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISLRVEDREVFRKTHQLIFKLAE
QGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKILEANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSL
YQNFTNLRHSPEQVIEDKKRLIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS
PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS
LNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHDTKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSK
QAKRSELPDRNDEYLLYQTLLGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF
LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRVKQDPLQLIA
DLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQISGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLG
ESVWADTEIHLPRWKRLDWVNGLTQERIPAGETLPVGVVLKSFPVALLWGQSR

Sequences:

>Translated_933_residues
MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINQELGGSEKFELLWEALNQQ
GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDVNWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGL
SINYYNLRFPLNIDTYADVFTYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP
IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISLRVEDREVFRKTHQLIFKLAE
QGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKILEANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSL
YQNFTNLRHSPEQVIEDKKRLIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS
PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS
LNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHDTKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSK
QAKRSELPDRNDEYLLYQTLLGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF
LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRVKQDPLQLIA
DLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQISGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLG
ESVWADTEIHLPRWKRLDWVNGLTQERIPAGETLPVGVVLKSFPVALLWGQSR
>Mature_933_residues
MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINQELGGSEKFELLWEALNQQ
GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDVNWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGL
SINYYNLRFPLNIDTYADVFTYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP
IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISLRVEDREVFRKTHQLIFKLAE
QGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKILEANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSL
YQNFTNLRHSPEQVIEDKKRLIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS
PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS
LNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHDTKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSK
QAKRSELPDRNDEYLLYQTLLGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF
LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRVKQDPLQLIA
DLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQISGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLG
ESVWADTEIHLPRWKRLDWVNGLTQERIPAGETLPVGVVLKSFPVALLWGQSR

Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]

COG id: COG3280

COG function: function code G; Maltooligosyl trehalose synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013797
- InterPro:   IPR012767 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =5.4.99.15 [H]

Molecular weight: Translated: 108323; Mature: 108323

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQI
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCHHHH
NQELGGSEKFELLWEALNQQGIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDV
HHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCHHEECCCHHHHHHHHHCCCCCCCCEEEEC
NWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGLSINYYNLRFPLNIDTYADVF
CCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHH
TYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISL
HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEHHHHHHH
RVEDREVFRKTHQLIFKLAEQGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKIL
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
EANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSLYQNFTNLRHSPEQVIEDKKR
HHCCCCCCCCCCCCCCCHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAG
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
PLMAKGVEDTAFYVYNRLLSLNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHD
HHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCHHCCCCCCEECCCCCCCC
TKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSKQAKRSELPDRNDEYLLYQTL
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCEEHHHHH
LGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHH
LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH
LAYLEEIQRRVKQDPLQLIADLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQI
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEE
SGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLGESVWADTEIHLPRWKRLDWV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCCCHHHHHHH
NGLTQERIPAGETLPVGVVLKSFPVALLWGQSR
CCCCHHCCCCCCCCHHHHHHHHCCEEEEECCCC
>Mature Secondary Structure
MRIPTSTYRIQFHAGFDFDAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQI
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCHHHH
NQELGGSEKFELLWEALNQQGIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFVDYFDV
HHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCHHEECCCHHHHHHHHHCCCCCCCCEEEEC
NWNHSYLGIKGRILAPFLGDFYDKCLESGQIQLRYDADGLSINYYNLRFPLNIDTYADVF
CCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHH
TYNLSKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSQP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQHFRLSFWKVGAEEINYRRFFTINELISL
HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEHHHHHHH
RVEDREVFRKTHQLIFKLAEQGRFNGLRIDHIDGLFNPEEYLHRLRERCPNLYIVVEKIL
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
EANESLPQSWPVQGTTGYDFLAKLNGIFCQEENAEAFDSLYQNFTNLRHSPEQVIEDKKR
HHCCCCCCCCCCCCCCCHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIIERNLSGDMDNLAFLLKQITSHHRYANDFTLYSLRRALVEVLVCFPVYRVYIHEGILS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEGQQVVRQAVEKAKENLPVLVNELNFIQRFLCLESLENLSDQEKNEQIHFAMRLQQLAG
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
PLMAKGVEDTAFYVYNRLLSLNEVGGDPCRFGLSVQEFHRFNQERSARWPLSMNASATHD
HHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCHHCCCCCCEECCCCCCCC
TKRGEDVRARLNVLSEIPAEWEKHINLWHELNLGYKVRSKQAKRSELPDRNDEYLLYQTL
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCEEHHHHH
LGSYPFQPEEVPQFVQRVKDYAIKAVREAKVHTAWLRPDTEYEEATTAFIERILQGPNPF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHH
LESFLPFQRKVAHFGIFNSLSQTLIKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH
LAYLEEIQRRVKQDPLQLIADLLLHRSDGRIKLFLIYHVLKARQEQPQLFLEGSYIPLQI
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEE
SGSHADHVVAFARQHSKQVLLTVVPRFLTKLIDETQDPLGESVWADTEIHLPRWKRLDWV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCCCHHHHHHH
NGLTQERIPAGETLPVGVVLKSFPVALLWGQSR
CCCCHHCCCCCCCCHHHHHHHHCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8605217; 8611744 [H]