| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609582
Identifier: 86609582
GI number: 86609582
Start: 2229594
End: 2229965
Strand: Direct
Name: 86609582
Synonym: CYB_2135
Alternate gene names: NA
Gene position: 2229594-2229965 (Clockwise)
Preceding gene: 86609581
Following gene: 86609583
Centisome position: 73.18
GC content: 60.75
Gene sequence:
>372_bases ATGAGGGGGACAAGTCTCCTGGCCCGCCATCGCCAAAACATAGCAGCCTCCCTGGCCCGTCGTTTGGAAGCAGCTAGGGC GGCCAACAACACCCGCTTGATGGAGCTGCTGAAACAAGAAGAGCGGCAGCTGGCAGCCGAGTACGGCGGCAGGGATCCCT TCTCTTCAGCGCTCTTCAGAGGACTGCGCCATCTTTGGCAGAGCTTGAAGGAAGTCTTGGCGGCCTGCGATGAACTGCGG GTGCGGCAGTGGGTAGATGGCAGCGGCATGGTCTGGTGGTCTGTCCAAGACCCAATCACGGGAGAGCGCCTGTGTACCCA TTCCGAGGGGGAGCTCATGGAGTGGATCGAGAAGCACCAGCGAGAGGATTAG
Upstream 100 bases:
>100_bases GGTTTTGCACTTTTCGTATCCTTGACTACAGATTTTTTGGTAGGATTGATCGTGTAGAGGTACTGGTATGTAGAGCAGCC TTATGAGTGCAATCGCTGAA
Downstream 100 bases:
>100_bases TCTTCGCGGCTAGGACTTGCCTGAGCACCAATAGCCAGTGTTTCCCCTGGCGCTTCGTGCGTGTCCCAGTCTTTCCAGCT TGGGAGGAAGGGAACAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRGTSLLARHRQNIAASLARRLEAARAANNTRLMELLKQEERQLAAEYGGRDPFSSALFRGLRHLWQSLKEVLAACDELR VRQWVDGSGMVWWSVQDPITGERLCTHSEGELMEWIEKHQRED
Sequences:
>Translated_123_residues MRGTSLLARHRQNIAASLARRLEAARAANNTRLMELLKQEERQLAAEYGGRDPFSSALFRGLRHLWQSLKEVLAACDELR VRQWVDGSGMVWWSVQDPITGERLCTHSEGELMEWIEKHQRED >Mature_123_residues MRGTSLLARHRQNIAASLARRLEAARAANNTRLMELLKQEERQLAAEYGGRDPFSSALFRGLRHLWQSLKEVLAACDELR VRQWVDGSGMVWWSVQDPITGERLCTHSEGELMEWIEKHQRED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14228; Mature: 14228
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGTSLLARHRQNIAASLARRLEAARAANNTRLMELLKQEERQLAAEYGGRDPFSSALFR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLRHLWQSLKEVLAACDELRVRQWVDGSGMVWWSVQDPITGERLCTHSEGELMEWIEKHQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHHC RED CCC >Mature Secondary Structure MRGTSLLARHRQNIAASLARRLEAARAANNTRLMELLKQEERQLAAEYGGRDPFSSALFR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLRHLWQSLKEVLAACDELRVRQWVDGSGMVWWSVQDPITGERLCTHSEGELMEWIEKHQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHHC RED CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA