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The map label for this gene is yraN [C]

Identifier: 86609566

GI number: 86609566

Start: 2213302

End: 2213703

Strand: Direct

Name: yraN [C]

Synonym: CYB_2119

Alternate gene names: 86609566

Gene position: 2213302-2213703 (Clockwise)

Preceding gene: 86609563

Following gene: 86609567

Centisome position: 72.65

GC content: 59.45

Gene sequence:

>402_bases
ATGGATCCCTTGCCCAGAAGGGCTTCCCTCCAGAATACAGGCAACGTCGGCGAGGGCTGGGTGCGGCAATATCTCTGTCA
GCAGGGCTGGCAGATCCTGGCCCAGCGGTGGCGCTGCCCTTGGGGCGAGCTGGATCTGGTTGCCCACAAAGCTGATGTGC
TGATTTTCGTAGAGGTGAAAACCCGTAGCCCCGGTAGCTGGGATCGAGGCGGGCTTTTGGCGGTTGGGATCCCCAAGCAG
CGACGCTTGATCCGGGCTGCCCAAGCCTTCTTGAGCCAGCATCCCCACCTCTCCGAGTTGTCCTGCCGTTTTGATGTTGC
GCTGATAGAACGTCGGGCCTCCAGGGAAGGGGTAAGCTACGCTTTGGTTGACTACCTGCCAGCAGCTTTTGAGATTTGTT
GA

Upstream 100 bases:

>100_bases
TGGCAAGTTTCTACTTCGGCACCCGCAACGGCTTTTACGACACCGACAAGTATCACGGCAATGGCTCTGCTCATTAGAGC
CGGGCGCTGGTGATTTTTTT

Downstream 100 bases:

>100_bases
GGCAAGCTTATCCGAGATGCTGTGGGAGCTTATGGCCGTTTCAGGTTAGGTGAGATGCCTGGGCTGCTGAGACAAGCCCT
CTAGCCCCGCGCATTATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDPLPRRASLQNTGNVGEGWVRQYLCQQGWQILAQRWRCPWGELDLVAHKADVLIFVEVKTRSPGSWDRGGLLAVGIPKQ
RRLIRAAQAFLSQHPHLSELSCRFDVALIERRASREGVSYALVDYLPAAFEIC

Sequences:

>Translated_133_residues
MDPLPRRASLQNTGNVGEGWVRQYLCQQGWQILAQRWRCPWGELDLVAHKADVLIFVEVKTRSPGSWDRGGLLAVGIPKQ
RRLIRAAQAFLSQHPHLSELSCRFDVALIERRASREGVSYALVDYLPAAFEIC
>Mature_133_residues
MDPLPRRASLQNTGNVGEGWVRQYLCQQGWQILAQRWRCPWGELDLVAHKADVLIFVEVKTRSPGSWDRGGLLAVGIPKQ
RRLIRAAQAFLSQHPHLSELSCRFDVALIERRASREGVSYALVDYLPAAFEIC

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2119_SYNJB (Q2JJU2)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_478328.1
- ProteinModelPortal:   Q2JJU2
- STRING:   Q2JJU2
- GeneID:   3902840
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_2119
- TIGR:   CYB_2119
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QRYDIVA
- PhylomeDB:   Q2JJU2
- ProtClustDB:   PRK12497
- BioCyc:   SSP321332:CYB_2119-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 15084; Mature: 15084

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLPRRASLQNTGNVGEGWVRQYLCQQGWQILAQRWRCPWGELDLVAHKADVLIFVEVK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEEEEEEE
TRSPGSWDRGGLLAVGIPKQRRLIRAAQAFLSQHPHLSELSCRFDVALIERRASREGVSY
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
ALVDYLPAAFEIC
HHHHHHHHHHHCC
>Mature Secondary Structure
MDPLPRRASLQNTGNVGEGWVRQYLCQQGWQILAQRWRCPWGELDLVAHKADVLIFVEVK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEEEEEEE
TRSPGSWDRGGLLAVGIPKQRRLIRAAQAFLSQHPHLSELSCRFDVALIERRASREGVSY
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
ALVDYLPAAFEIC
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA