| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609529
Identifier: 86609529
GI number: 86609529
Start: 2176931
End: 2177467
Strand: Direct
Name: 86609529
Synonym: CYB_2081
Alternate gene names: NA
Gene position: 2176931-2177467 (Clockwise)
Preceding gene: 86609528
Following gene: 86609533
Centisome position: 71.45
GC content: 58.29
Gene sequence:
>537_bases TTGCGTCACGACAGCGTAACTCCGCGCTGGTCTCAAGTGGCGTGGACCGTTTTGCGGGTGGTGGCAGGGCTATTCATGAT TCACAACGGCCTTGACAAACTGGCAGATATCGAAGGATTTGCGACGGCTTATGTAGAAGTGATCGGGTTGCCCTTCCCGA TCTTCTTCGCTTATGTGGCTGCCTATACCGAGCTGATCGCAGCTCCGATGGTGGCGTTGGGTTTGTTGACCCGAGGGGCA GCACTGGGCTTGTTCGCCACGATGGCGGTGGCCATGTTCCATCACATTAAGGTGGCCGGCTTCAGCGTTCCCTACTTGGA GCTATCCGCCATCTACGCAGCGATCTTCCTGGCCTTTGCGGTGAATGGGGGGGGCTGGTTCTCTGTGGATCAGCTCTTGG TGAATGCAATCGAGTCGTGGCTGAACCGCGCCAGCCGGGAAAAGTTGGAGAGCTTGCAGTCTTCGTTGCAGGCCACGGAA CGGGTAATTGCGCTGGGCGAGGAAGAGGCCGAGGCCGCCAAGACCACCGGATCCTGA
Upstream 100 bases:
>100_bases TAGAATCGTTACAATGAGTTAGAATCTTTGCTCATCTTTGCATCGCAGGTTTTATCCTATGGCACCCTCTCAGCAGTTTC CCGTGCTACTCGCCTCAGCT
Downstream 100 bases:
>100_bases GCTTTGGTGGCCATTCCCGATAGCGGCGAGGCTGCTCCTCTCTCCCTCTGAGAGAGAGGTTAGCAGTGAGAGTCATCCTG CTAAATGCGGCTGGCGGCCC
Product: DoxX family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRHDSVTPRWSQVAWTVLRVVAGLFMIHNGLDKLADIEGFATAYVEVIGLPFPIFFAYVAAYTELIAAPMVALGLLTRGA ALGLFATMAVAMFHHIKVAGFSVPYLELSAIYAAIFLAFAVNGGGWFSVDQLLVNAIESWLNRASREKLESLQSSLQATE RVIALGEEEAEAAKTTGS
Sequences:
>Translated_178_residues MRHDSVTPRWSQVAWTVLRVVAGLFMIHNGLDKLADIEGFATAYVEVIGLPFPIFFAYVAAYTELIAAPMVALGLLTRGA ALGLFATMAVAMFHHIKVAGFSVPYLELSAIYAAIFLAFAVNGGGWFSVDQLLVNAIESWLNRASREKLESLQSSLQATE RVIALGEEEAEAAKTTGS >Mature_178_residues MRHDSVTPRWSQVAWTVLRVVAGLFMIHNGLDKLADIEGFATAYVEVIGLPFPIFFAYVAAYTELIAAPMVALGLLTRGA ALGLFATMAVAMFHHIKVAGFSVPYLELSAIYAAIFLAFAVNGGGWFSVDQLLVNAIESWLNRASREKLESLQSSLQATE RVIALGEEEAEAAKTTGS
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19237; Mature: 19237
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHDSVTPRWSQVAWTVLRVVAGLFMIHNGLDKLADIEGFATAYVEVIGLPFPIFFAYVA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AYTELIAAPMVALGLLTRGAALGLFATMAVAMFHHIKVAGFSVPYLELSAIYAAIFLAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VNGGGWFSVDQLLVNAIESWLNRASREKLESLQSSLQATERVIALGEEEAEAAKTTGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC >Mature Secondary Structure MRHDSVTPRWSQVAWTVLRVVAGLFMIHNGLDKLADIEGFATAYVEVIGLPFPIFFAYVA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AYTELIAAPMVALGLLTRGAALGLFATMAVAMFHHIKVAGFSVPYLELSAIYAAIFLAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VNGGGWFSVDQLLVNAIESWLNRASREKLESLQSSLQATERVIALGEEEAEAAKTTGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA