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The map label for this gene is 86609451

Identifier: 86609451

GI number: 86609451

Start: 2107664

End: 2108410

Strand: Direct

Name: 86609451

Synonym: CYB_2002

Alternate gene names: NA

Gene position: 2107664-2108410 (Clockwise)

Preceding gene: 86609449

Following gene: 86609452

Centisome position: 69.18

GC content: 52.88

Gene sequence:

>747_bases
GTGGTACCCCTGCAAGATCGCAACCCAACCACCCGCACAGCCTATGTCACTTATGCCTTGGTGATCGTTAATATTCTAGT
CTTTCTGTACCAGCTAACCCTGTCGCCACAAGAGCTGGCAGCTTTTTTCCGAGAGTGGGCAGTGGTACCGATAGAGTTGA
CGGCCAGTTTTCGAGGGGAGCTCACCTCTTCGTCGCGTCCGGAATGGATAACCCTATTCACCTCACAATTTCTGCATGGG
GGCTTTCTCCACATTGGCGGGAACATGCTCTTTTTGTGGGTTTTCGGCAACAACGTTGAGGATCGCTTGGGCCATTTGCG
CTACCTCATCTTTTACCTGGCTTGCGGAGCTTTGGCTGCATTAACGCAGTGGTTTTTCGATATGGGATCCCCCATTCCTT
CACTGGGGGCAAGCGGCGCTATTGCTGGCGTATTGGGAGCCTATATTTTGCGTTTTCCACGGGCCGAGATTCTGACCCTG
GTGCCCTTGGGTATTTTCATCACAACCCTCTACGTTCCGGCTTGGGTGTTCCTAGGCTTTTGGTTCATCCAGCAAGCTTT
CTACGGCATTGCCAGCCTACAGACGCCTACCAATATCGGTATGCAGGGTGGGGGAATTGCTTACTGGGCCCATGCGGGCG
GTTTTGTGTTTGGGGCCATTTTGGGGCCGCTGATGGGGTTGTTTTCCGGCAAAAGCCCTTATGACCGCCAAATGACTTGG
CAACAACGTGACAGGGATCTGTTTTGA

Upstream 100 bases:

>100_bases
GGTTACCCTAGTGTAGCCTCAGGTAGGGGCTTAGAGGTGAGCCGGGGGGGGTGGGAAAGGACAGGTTAGGCTAGAGGGTG
ACGTCAACCGGATCTTAACT

Downstream 100 bases:

>100_bases
TTTGATCAGCTTTGATACTTTCTCAGTCTATTGTTAATCGGATAGCAGCGTGATGGGAGAAAGCCATGGTCAGTCTATCT
GCCAAGCCTCTAACTCTGGA

Product: S54 family peptidase

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Serine Protease; Cytoplasmic Membrane Protein; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MVPLQDRNPTTRTAYVTYALVIVNILVFLYQLTLSPQELAAFFREWAVVPIELTASFRGELTSSSRPEWITLFTSQFLHG
GFLHIGGNMLFLWVFGNNVEDRLGHLRYLIFYLACGALAALTQWFFDMGSPIPSLGASGAIAGVLGAYILRFPRAEILTL
VPLGIFITTLYVPAWVFLGFWFIQQAFYGIASLQTPTNIGMQGGGIAYWAHAGGFVFGAILGPLMGLFSGKSPYDRQMTW
QQRDRDLF

Sequences:

>Translated_248_residues
MVPLQDRNPTTRTAYVTYALVIVNILVFLYQLTLSPQELAAFFREWAVVPIELTASFRGELTSSSRPEWITLFTSQFLHG
GFLHIGGNMLFLWVFGNNVEDRLGHLRYLIFYLACGALAALTQWFFDMGSPIPSLGASGAIAGVLGAYILRFPRAEILTL
VPLGIFITTLYVPAWVFLGFWFIQQAFYGIASLQTPTNIGMQGGGIAYWAHAGGFVFGAILGPLMGLFSGKSPYDRQMTW
QQRDRDLF
>Mature_248_residues
MVPLQDRNPTTRTAYVTYALVIVNILVFLYQLTLSPQELAAFFREWAVVPIELTASFRGELTSSSRPEWITLFTSQFLHG
GFLHIGGNMLFLWVFGNNVEDRLGHLRYLIFYLACGALAALTQWFFDMGSPIPSLGASGAIAGVLGAYILRFPRAEILTL
VPLGIFITTLYVPAWVFLGFWFIQQAFYGIASLQTPTNIGMQGGGIAYWAHAGGFVFGAILGPLMGLFSGKSPYDRQMTW
QQRDRDLF

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=221, Percent_Identity=28.5067873303167, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27654; Mature: 27654

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPLQDRNPTTRTAYVTYALVIVNILVFLYQLTLSPQELAAFFREWAVVPIELTASFRGE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEECCCCCC
LTSSSRPEWITLFTSQFLHGGFLHIGGNMLFLWVFGNNVEDRLGHLRYLIFYLACGALAA
CCCCCCCCEEHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LTQWFFDMGSPIPSLGASGAIAGVLGAYILRFPRAEILTLVPLGIFITTLYVPAWVFLGF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFIQQAFYGIASLQTPTNIGMQGGGIAYWAHAGGFVFGAILGPLMGLFSGKSPYDRQMTW
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
QQRDRDLF
HHHCCCCC
>Mature Secondary Structure
MVPLQDRNPTTRTAYVTYALVIVNILVFLYQLTLSPQELAAFFREWAVVPIELTASFRGE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEECCCCCC
LTSSSRPEWITLFTSQFLHGGFLHIGGNMLFLWVFGNNVEDRLGHLRYLIFYLACGALAA
CCCCCCCCEEHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LTQWFFDMGSPIPSLGASGAIAGVLGAYILRFPRAEILTLVPLGIFITTLYVPAWVFLGF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFIQQAFYGIASLQTPTNIGMQGGGIAYWAHAGGFVFGAILGPLMGLFSGKSPYDRQMTW
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
QQRDRDLF
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA