| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609402
Identifier: 86609402
GI number: 86609402
Start: 2038635
End: 2040356
Strand: Reverse
Name: 86609402
Synonym: CYB_1946
Alternate gene names: NA
Gene position: 2040356-2038635 (Counterclockwise)
Preceding gene: 86609404
Following gene: 86609401
Centisome position: 66.97
GC content: 61.27
Gene sequence:
>1722_bases GTGCTGAGACTGCCGAAAAACCAAGGGATCCGCTGGCTTGCGGGTGTGCTGGGCGCGCTGATGTTGCTGGGATCCGGAAT CACGGCCCAGGCTCAGTTCTTGTGGCCCGGCCATTCCCTTTTCCCCAGCTCTGGTTCCGTAGACAGTACGGAACAGAGGG GATCCCACTTGGCTGCTCGGCTCGACGCCTACTGCCGACAGCCGCCCGAGGAGGTAGCGCGCAAGGCTCAACTGCGCCAG CAGGCTGCCCAGTCGAATGCTGCTTGGGCCGAGTACACCCAAGTTTTGGCCGAACATGGCGCTGCCTTGATCGCCTGCCG CAGCCAACGCTGGCCCCAGATCCAGGCCATTTGGGTACGTCTGCACCCTTGTGATGCCAATCCGGGCGTGTTGGATCAGG TATTCGACCAAGTGGTAAACCTGGGCTACAACCGCGTCTTTATCGAGACCTTTTACGATGGTCGCTCCATTTTGCCGGAT GGCGCAGGAGGGATCTGGCCCAGCTTACAGCCCAACGCCGACTTGTTGGATCTGGCTCTGAAGGCGGCGCGACGCCGCGG TTTGTCTGCTTATGCTTGGGTGTTTTCCCTCAATTTCGGTTACAGCTACGGACAACGGCCCGATCGACAGGTGGCCCTGG CCCGCAACGGTCGTGGCATAACCACTGTTCTGGATCCGGCAACAGCCCTTGGGGAAGATTTGGGCAGCCCGGATGAGGTG TTTGTGGATCCCTTTCATCCCTTGGCACGGCGGGATTTTGCCGAGTTGGTCCGCCGCATCCTACAGCGACAGCCGGATGG GATCCTTTTCGACTACATTCGCTATCCGCGTGGCTCAGGGGGATCCAGCGTGGCAGCCACCGTCCGAGACTTGTGGATTC ATGGAGAGGCCGCCCGGAAAGCCTACCTCAATTTGGCAGAAAACCCGGCGGGTCGGGCATTGCTGGAGCGCTACCTAAGC CAGGGCTACATTGCAGTGGCAGATGTTCTCCATCTGGATGCCACCTATGCCGAAGAGCCCAGGTGGCGGCAGCCAGGGGA TCCCTGGCCCAGCCCGACCGAGAAATGGGCGCTTTCCCCAGAGTTACTGGACTGGGCTGCCCAAGACATGGCCAGCAGGA ATTGGCAGGGGGATCAGCTTTCCTCTGCAAAAGATTTACCAGAGAGTCTGGAGAAACCGGCGGATTCCAGTTCTGAGGCA GCAGCACCAACTCCTGCCCCTTCCCCCACCCCCAGCGCCGCCGTTCGCCAAGAACGTTGGCAGCAGCAGCTTTGGCAGCT GAGCGTCGAGTTTGCCCGCTACGGCGTTCTCGATTATCTACAGCAGGCCGCCCAACCCGCCCAGAGGCTGGGGATCCCGG TGGGGGCTGTCTTCTTCCCAGAAGGCAACCAAGCAGTAGGAGAAGGGTTTGACGCTCGTCTGCAACCCTGGGACCGCTTT GATCCGGGTATGGAATGGCACCCAATGGCCTATGCCAAGTGCGAGGATAGCTCCTGTGTGGCGCAGCAGGTGGAGCAGGT CCTGGCTGTGGCCTCTCCCCAAACCTTTGTCTGCCCGGCCATTGCCGGTCTATGGGGACAAGCCCAGCGGCAACGCCCCA GCCTGGAAACCCAAACAGCAGAGCTGGCCCGCCGCTTCCCGCAGTTGCCCTGTGTGAGTCACTTCGCCCTCTCCTGGATC GAGCCGGAGCTGGAGCGCAGCCGTCGCACCTGTCAACTCTAA
Upstream 100 bases:
>100_bases GGATTGCGCCGGTGTGGGCACGGGCGGCTGTTTTTTTTCAATAGCCGCTCTCTGGGCAGGAGAAGAGTACGATCGGGGCC ATTCTCGGTGGAGGTTGAGG
Downstream 100 bases:
>100_bases CGCCCATCCCAATCTGAAAGTTAGGAATTCTGAACTTATGAGCCCTGAGCAATTTGATCTGATTAACCGCCTGTTTCAAC TGACCTTTCAGATCGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MLRLPKNQGIRWLAGVLGALMLLGSGITAQAQFLWPGHSLFPSSGSVDSTEQRGSHLAARLDAYCRQPPEEVARKAQLRQ QAAQSNAAWAEYTQVLAEHGAALIACRSQRWPQIQAIWVRLHPCDANPGVLDQVFDQVVNLGYNRVFIETFYDGRSILPD GAGGIWPSLQPNADLLDLALKAARRRGLSAYAWVFSLNFGYSYGQRPDRQVALARNGRGITTVLDPATALGEDLGSPDEV FVDPFHPLARRDFAELVRRILQRQPDGILFDYIRYPRGSGGSSVAATVRDLWIHGEAARKAYLNLAENPAGRALLERYLS QGYIAVADVLHLDATYAEEPRWRQPGDPWPSPTEKWALSPELLDWAAQDMASRNWQGDQLSSAKDLPESLEKPADSSSEA AAPTPAPSPTPSAAVRQERWQQQLWQLSVEFARYGVLDYLQQAAQPAQRLGIPVGAVFFPEGNQAVGEGFDARLQPWDRF DPGMEWHPMAYAKCEDSSCVAQQVEQVLAVASPQTFVCPAIAGLWGQAQRQRPSLETQTAELARRFPQLPCVSHFALSWI EPELERSRRTCQL
Sequences:
>Translated_573_residues MLRLPKNQGIRWLAGVLGALMLLGSGITAQAQFLWPGHSLFPSSGSVDSTEQRGSHLAARLDAYCRQPPEEVARKAQLRQ QAAQSNAAWAEYTQVLAEHGAALIACRSQRWPQIQAIWVRLHPCDANPGVLDQVFDQVVNLGYNRVFIETFYDGRSILPD GAGGIWPSLQPNADLLDLALKAARRRGLSAYAWVFSLNFGYSYGQRPDRQVALARNGRGITTVLDPATALGEDLGSPDEV FVDPFHPLARRDFAELVRRILQRQPDGILFDYIRYPRGSGGSSVAATVRDLWIHGEAARKAYLNLAENPAGRALLERYLS QGYIAVADVLHLDATYAEEPRWRQPGDPWPSPTEKWALSPELLDWAAQDMASRNWQGDQLSSAKDLPESLEKPADSSSEA AAPTPAPSPTPSAAVRQERWQQQLWQLSVEFARYGVLDYLQQAAQPAQRLGIPVGAVFFPEGNQAVGEGFDARLQPWDRF DPGMEWHPMAYAKCEDSSCVAQQVEQVLAVASPQTFVCPAIAGLWGQAQRQRPSLETQTAELARRFPQLPCVSHFALSWI EPELERSRRTCQL >Mature_573_residues MLRLPKNQGIRWLAGVLGALMLLGSGITAQAQFLWPGHSLFPSSGSVDSTEQRGSHLAARLDAYCRQPPEEVARKAQLRQ QAAQSNAAWAEYTQVLAEHGAALIACRSQRWPQIQAIWVRLHPCDANPGVLDQVFDQVVNLGYNRVFIETFYDGRSILPD GAGGIWPSLQPNADLLDLALKAARRRGLSAYAWVFSLNFGYSYGQRPDRQVALARNGRGITTVLDPATALGEDLGSPDEV FVDPFHPLARRDFAELVRRILQRQPDGILFDYIRYPRGSGGSSVAATVRDLWIHGEAARKAYLNLAENPAGRALLERYLS QGYIAVADVLHLDATYAEEPRWRQPGDPWPSPTEKWALSPELLDWAAQDMASRNWQGDQLSSAKDLPESLEKPADSSSEA AAPTPAPSPTPSAAVRQERWQQQLWQLSVEFARYGVLDYLQQAAQPAQRLGIPVGAVFFPEGNQAVGEGFDARLQPWDRF DPGMEWHPMAYAKCEDSSCVAQQVEQVLAVASPQTFVCPAIAGLWGQAQRQRPSLETQTAELARRFPQLPCVSHFALSWI EPELERSRRTCQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63534; Mature: 63534
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLPKNQGIRWLAGVLGALMLLGSGITAQAQFLWPGHSLFPSSGSVDSTEQRGSHLAAR CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH LDAYCRQPPEEVARKAQLRQQAAQSNAAWAEYTQVLAEHGAALIACRSQRWPQIQAIWVR HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEE LHPCDANPGVLDQVFDQVVNLGYNRVFIETFYDGRSILPDGAGGIWPSLQPNADLLDLAL EEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH KAARRRGLSAYAWVFSLNFGYSYGQRPDRQVALARNGRGITTVLDPATALGEDLGSPDEV HHHHHCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHCCCCCCE FVDPFHPLARRDFAELVRRILQRQPDGILFDYIRYPRGSGGSSVAATVRDLWIHGEAARK EECCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH AYLNLAENPAGRALLERYLSQGYIAVADVLHLDATYAEEPRWRQPGDPWPSPTEKWALSP HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHCCCH ELLDWAAQDMASRNWQGDQLSSAKDLPESLEKPADSSSEAAAPTPAPSPTPSAAVRQERW HHHHHHHHHHHHCCCCCCHHCCHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QQQLWQLSVEFARYGVLDYLQQAAQPAQRLGIPVGAVFFPEGNQAVGEGFDARLQPWDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHCCCCCCCCCCCCCC DPGMEWHPMAYAKCEDSSCVAQQVEQVLAVASPQTFVCPAIAGLWGQAQRQRPSLETQTA CCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH ELARRFPQLPCVSHFALSWIEPELERSRRTCQL HHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MLRLPKNQGIRWLAGVLGALMLLGSGITAQAQFLWPGHSLFPSSGSVDSTEQRGSHLAAR CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH LDAYCRQPPEEVARKAQLRQQAAQSNAAWAEYTQVLAEHGAALIACRSQRWPQIQAIWVR HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEE LHPCDANPGVLDQVFDQVVNLGYNRVFIETFYDGRSILPDGAGGIWPSLQPNADLLDLAL EEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH KAARRRGLSAYAWVFSLNFGYSYGQRPDRQVALARNGRGITTVLDPATALGEDLGSPDEV HHHHHCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHCCCCCCE FVDPFHPLARRDFAELVRRILQRQPDGILFDYIRYPRGSGGSSVAATVRDLWIHGEAARK EECCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH AYLNLAENPAGRALLERYLSQGYIAVADVLHLDATYAEEPRWRQPGDPWPSPTEKWALSP HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHCCCH ELLDWAAQDMASRNWQGDQLSSAKDLPESLEKPADSSSEAAAPTPAPSPTPSAAVRQERW HHHHHHHHHHHHCCCCCCHHCCHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QQQLWQLSVEFARYGVLDYLQQAAQPAQRLGIPVGAVFFPEGNQAVGEGFDARLQPWDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHCCCCCCCCCCCCCC DPGMEWHPMAYAKCEDSSCVAQQVEQVLAVASPQTFVCPAIAGLWGQAQRQRPSLETQTA CCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH ELARRFPQLPCVSHFALSWIEPELERSRRTCQL HHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA