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The map label for this gene is etfB [H]

Identifier: 86609398

GI number: 86609398

Start: 2033503

End: 2034327

Strand: Reverse

Name: etfB [H]

Synonym: CYB_1942

Alternate gene names: 86609398

Gene position: 2034327-2033503 (Counterclockwise)

Preceding gene: 86609399

Following gene: 86609397

Centisome position: 66.77

GC content: 60.48

Gene sequence:

>825_bases
TTGGAAACTTTTGTTCTGATTAAGCAAGTTCCCGATCAAAACGCCAAGGCCGGCATCAACAGTGACGGCACGATCGATCG
CGCCAAGGCCAAGCGGATGTTAAACCCTTTTGATCGCTATGCACTGGAAGCAGCTCTGCAAACCAAACGGCAACACGGGG
CAAGGGTAACGGCAATTACAATGGGGCCACCCCCGGCCATTGAGGTGCTCTACGAGGCCATTGCCCACGGGGTGGATCGG
GGTATTTTGATGACCGACCGCCGCTTGGCCGCTTCCGATACCCTAGCCACTGCCTATACTCTGGCCCAGACGGTTCGCTA
TGCTGGCCGGCCCGATGTGATCTTCTGCGGGCTCCAGACCACCGACGGCGATACGGCCCAGGTGGGGCCGCAGTTGGCGG
AGCGGTTGGGGATCCCTCAGGTCACCTATTGCGAAGCCTTCGAGATTCGGGATGGGATCCTGGTGGCGCGGCGGGCCATC
GAAGGGGGATCCCAAATCGTGATGGTGCCCCTGCCGGTTTTGATTACGGTGGCCAATTCCGCTCGGCGTTTGGCCTACCC
CACTCTACGGGGTGTGCAGCGGGTGCAGCGGCTAATGCGGGATGAAATGGCACGGGCCGAGGCAATCCAGATCCTCAACT
TGGACGATGTGGGGGCAGACCCGGAGCGCTGCGGTCTCAAGGGATCCCCAACCATCGTGGCTGCCACCGAAAAAGTGGGG
GAAATTGGCGGCAACTGTCAGGTCTTTCAGGGACAATCCGTCCCCCAACTGGTCAACCAACTGACCCAGGCCGTTGACCT
CTCCCGCTACGCCGCAACCTCCTAG

Upstream 100 bases:

>100_bases
TGCCGGGGTGGCTTTTCCGATCCCGAAAAAAAGCTGAATAAGTGTGTGGCGCCCAGGGATCCCTTTTAACCTGGAGGGGA
TCACTAGGGAGTTTAGGCCC

Downstream 100 bases:

>100_bases
ATCTTTACATCTTGCGTCCCACCGGCCCCCCATCGCCCCTCAATCATCACTGTCTGATCATCGACCCCAGGCCAGCTGGC
TGGAGTGAAAAGTTGACCCA

Product: electron transfer flavoprotein, beta subunit/FixA family protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
METFVLIKQVPDQNAKAGINSDGTIDRAKAKRMLNPFDRYALEAALQTKRQHGARVTAITMGPPPAIEVLYEAIAHGVDR
GILMTDRRLAASDTLATAYTLAQTVRYAGRPDVIFCGLQTTDGDTAQVGPQLAERLGIPQVTYCEAFEIRDGILVARRAI
EGGSQIVMVPLPVLITVANSARRLAYPTLRGVQRVQRLMRDEMARAEAIQILNLDDVGADPERCGLKGSPTIVAATEKVG
EIGGNCQVFQGQSVPQLVNQLTQAVDLSRYAATS

Sequences:

>Translated_274_residues
METFVLIKQVPDQNAKAGINSDGTIDRAKAKRMLNPFDRYALEAALQTKRQHGARVTAITMGPPPAIEVLYEAIAHGVDR
GILMTDRRLAASDTLATAYTLAQTVRYAGRPDVIFCGLQTTDGDTAQVGPQLAERLGIPQVTYCEAFEIRDGILVARRAI
EGGSQIVMVPLPVLITVANSARRLAYPTLRGVQRVQRLMRDEMARAEAIQILNLDDVGADPERCGLKGSPTIVAATEKVG
EIGGNCQVFQGQSVPQLVNQLTQAVDLSRYAATS
>Mature_274_residues
METFVLIKQVPDQNAKAGINSDGTIDRAKAKRMLNPFDRYALEAALQTKRQHGARVTAITMGPPPAIEVLYEAIAHGVDR
GILMTDRRLAASDTLATAYTLAQTVRYAGRPDVIFCGLQTTDGDTAQVGPQLAERLGIPQVTYCEAFEIRDGILVARRAI
EGGSQIVMVPLPVLITVANSARRLAYPTLRGVQRVQRLMRDEMARAEAIQILNLDDVGADPERCGLKGSPTIVAATEKVG
EIGGNCQVFQGQSVPQLVNQLTQAVDLSRYAATS

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=227, Percent_Identity=26.8722466960352, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87081682, Length=196, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=203, Percent_Identity=29.064039408867, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321646, Length=202, Percent_Identity=28.2178217821782, Blast_Score=69, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24651147, Length=200, Percent_Identity=28, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24651145, Length=200, Percent_Identity=28, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29598; Mature: 29598

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFVLIKQVPDQNAKAGINSDGTIDRAKAKRMLNPFDRYALEAALQTKRQHGARVTAIT
CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEE
MGPPPAIEVLYEAIAHGVDRGILMTDRRLAASDTLATAYTLAQTVRYAGRPDVIFCGLQT
CCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
TDGDTAQVGPQLAERLGIPQVTYCEAFEIRDGILVARRAIEGGSQIVMVPLPVLITVANS
CCCCHHHCCHHHHHHCCCCCEEHHHHHHHCCHHHHHHHHHCCCCEEEEECCCEEEEECCC
ARRLAYPTLRGVQRVQRLMRDEMARAEAIQILNLDDVGADPERCGLKGSPTIVAATEKVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCCCEEEEEHHHHH
EIGGNCQVFQGQSVPQLVNQLTQAVDLSRYAATS
HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METFVLIKQVPDQNAKAGINSDGTIDRAKAKRMLNPFDRYALEAALQTKRQHGARVTAIT
CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEE
MGPPPAIEVLYEAIAHGVDRGILMTDRRLAASDTLATAYTLAQTVRYAGRPDVIFCGLQT
CCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
TDGDTAQVGPQLAERLGIPQVTYCEAFEIRDGILVARRAIEGGSQIVMVPLPVLITVANS
CCCCHHHCCHHHHHHCCCCCEEHHHHHHHCCHHHHHHHHHCCCCEEEEECCCEEEEECCC
ARRLAYPTLRGVQRVQRLMRDEMARAEAIQILNLDDVGADPERCGLKGSPTIVAATEKVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCCCEEEEEHHHHH
EIGGNCQVFQGQSVPQLVNQLTQAVDLSRYAATS
HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA