Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609375

Identifier: 86609375

GI number: 86609375

Start: 2004170

End: 2004751

Strand: Direct

Name: 86609375

Synonym: CYB_1919

Alternate gene names: NA

Gene position: 2004170-2004751 (Clockwise)

Preceding gene: 86609372

Following gene: 86609376

Centisome position: 65.78

GC content: 51.37

Gene sequence:

>582_bases
ATGACCGTCGGAGCTGTGCCAACTCAGGGAAAAAGAGCTTGGACAGCCGAAGAATTCATGGCGTTGTCCAGGGAGGGACA
TCGCTACGAGATTGTTGATGGGAAGCCAATTGATATGGGAAGCGCGGGGGCACTCCATGGTTATGTCTGCAGCCTCCTAT
TGGCAGCTTTGACCCCCTACGTTTTGTCCAACAAGCTGGGGATCGTTTTAGATTCCAGCACTGCTTTTAAGATGAAGAGT
GGAAATTGGCGCTCCCCTGACATCTCTTTTTTTGCTAAAGAACGCTTGCAGGGCATGGCTGAACTGCCCACAGGATTTTT
GGAAGGCGCTCCAGATCTGGCTGTTGAAGTGCTTTCCCCCCGCAATACGGTTGAAGAAATTCATGACAAGCTGGTGGAGT
ACTTTGAAAATGGCAGCCGCCTGGTTTGGCTGGTTCACCCCAGCGAGCACTACGTCCTGGTGTATCGCAGCTCTCAAGAG
CCTGACCGCCTCCTGAAATCGGTTGATCTTCTAGAAGGTGAAGAGGTTATTCCAGGATTTGCCCTGCCGGTGGCTCATCT
ATTCCAGAAGCTTTCCTTGTAA

Upstream 100 bases:

>100_bases
AGGCTATTTTAGCCTTTGGCGTCCCCCCTCGAGGAAAAGCCGCTGGGGGATCCCTGCGGGCTTGGCTTGCGGTGTCGAAG
GAGCAGCAAGGAGTTTGCAG

Downstream 100 bases:

>100_bases
CATCCCCCCGCCCTCACTCTAGCCAATAGAGCTTGGGCCTCCCAACCTTGCCATTGGGCATTCCTGCCCCGCGTCACAGA
ACGACTTGGCAGAGGAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTVGAVPTQGKRAWTAEEFMALSREGHRYEIVDGKPIDMGSAGALHGYVCSLLLAALTPYVLSNKLGIVLDSSTAFKMKS
GNWRSPDISFFAKERLQGMAELPTGFLEGAPDLAVEVLSPRNTVEEIHDKLVEYFENGSRLVWLVHPSEHYVLVYRSSQE
PDRLLKSVDLLEGEEVIPGFALPVAHLFQKLSL

Sequences:

>Translated_193_residues
MTVGAVPTQGKRAWTAEEFMALSREGHRYEIVDGKPIDMGSAGALHGYVCSLLLAALTPYVLSNKLGIVLDSSTAFKMKS
GNWRSPDISFFAKERLQGMAELPTGFLEGAPDLAVEVLSPRNTVEEIHDKLVEYFENGSRLVWLVHPSEHYVLVYRSSQE
PDRLLKSVDLLEGEEVIPGFALPVAHLFQKLSL
>Mature_192_residues
TVGAVPTQGKRAWTAEEFMALSREGHRYEIVDGKPIDMGSAGALHGYVCSLLLAALTPYVLSNKLGIVLDSSTAFKMKSG
NWRSPDISFFAKERLQGMAELPTGFLEGAPDLAVEVLSPRNTVEEIHDKLVEYFENGSRLVWLVHPSEHYVLVYRSSQEP
DRLLKSVDLLEGEEVIPGFALPVAHLFQKLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21357; Mature: 21226

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGAVPTQGKRAWTAEEFMALSREGHRYEIVDGKPIDMGSAGALHGYVCSLLLAALTPY
CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
VLSNKLGIVLDSSTAFKMKSGNWRSPDISFFAKERLQGMAELPTGFLEGAPDLAVEVLSP
HHCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHEEEECCC
RNTVEEIHDKLVEYFENGSRLVWLVHPSEHYVLVYRSSQEPDRLLKSVDLLEGEEVIPGF
CHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCH
ALPVAHLFQKLSL
HHHHHHHHHHHCC
>Mature Secondary Structure 
TVGAVPTQGKRAWTAEEFMALSREGHRYEIVDGKPIDMGSAGALHGYVCSLLLAALTPY
CCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
VLSNKLGIVLDSSTAFKMKSGNWRSPDISFFAKERLQGMAELPTGFLEGAPDLAVEVLSP
HHCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHEEEECCC
RNTVEEIHDKLVEYFENGSRLVWLVHPSEHYVLVYRSSQEPDRLLKSVDLLEGEEVIPGF
CHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCH
ALPVAHLFQKLSL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA