| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is tarA [H]
Identifier: 86609344
GI number: 86609344
Start: 1975134
End: 1975883
Strand: Reverse
Name: tarA [H]
Synonym: CYB_1888
Alternate gene names: 86609344
Gene position: 1975883-1975134 (Counterclockwise)
Preceding gene: 86609348
Following gene: 86609343
Centisome position: 64.85
GC content: 62.53
Gene sequence:
>750_bases GTGTCGTTATCCATCCATGCGATTCTGGGCGTGAACCTGCACCTTGCTCTGCCGGAGGCCAGCCTACAGAGCTACGCCAC CTGGATTGAGGCGCGTATTCGGGAGGGTCAGGGCGCTCAGGTGGTTACCTGCAACCCGGAAATGATCATGCAGGCGCAGC GGGATCTGGCCTTTGCCCAGGTGCTGCAGGCAGCAGAGCTGGTGATCCCCGACGGCATCGGGGTGGTGTGGGCTTTGCGA CGGCAGGGGATCCGCGTCCAGCGGGTGCCGGGGATCGAGCTGGCAGAAACCCTGATCCCGTTGGCGGCAGAACGGGGGTG GCGCTTGGCCCTGGTGGGGGGAAGGCCGGAAGTCAACCGGGCAGCAATTCGATATTGGCAAGCCCAGTGTCCTGCTTTGG CCCTCTGGGGCTACCACGGCTACTTCTCTAGCGAGGAAGAAAAAGAGCTTCTGCAAGCTCTCCAGGAATTTCGACCGCAA CTGGTGTGGGTGGGGCTGGGATCCCCGCGGCAGGAGCTGTGGATCCAAAAGTGGCGTCCCCTTTTGCCCCAAGCCATCTG GATGGGGGTGGGGGGCAGCTTGGACATTTGGGCCGGCCAAAAACGGCGAGCGCCCCGTTGGTGGCGTGACCATCACCTGG AATGGTTGTATCGTCTCTATCAGGAACCCTGGCGCTGGCGACGCATGTTAGCTCTGCCCAGCTTTGTCTGGCGAGTGCTG TGGGATCCCTCTTCTCGTTTGCGCCCCTAG
Upstream 100 bases:
>100_bases TGAAATGCCTCCTCGAACTCCCCTCTCCCTCTGGGAGAAGGTCCGGGCTATCTTAAAAGCGTGTCCAACGGCTCCAGTGG GGGCCAGCATTCGGTCGGTA
Downstream 100 bases:
>100_bases TCTGCCGGCGCTCTCTCCCTCCTCTGTCTAGGCGCTTACTATGGTGATCGGTCAGCACATCGGCTATCCTCCTCGCTTAC ACCGTTGGGCGGGTACGGCT
Product: WecB/TagA/CpsF family glycosyl transferase
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSLSIHAILGVNLHLALPEASLQSYATWIEARIREGQGAQVVTCNPEMIMQAQRDLAFAQVLQAAELVIPDGIGVVWALR RQGIRVQRVPGIELAETLIPLAAERGWRLALVGGRPEVNRAAIRYWQAQCPALALWGYHGYFSSEEEKELLQALQEFRPQ LVWVGLGSPRQELWIQKWRPLLPQAIWMGVGGSLDIWAGQKRRAPRWWRDHHLEWLYRLYQEPWRWRRMLALPSFVWRVL WDPSSRLRP
Sequences:
>Translated_249_residues MSLSIHAILGVNLHLALPEASLQSYATWIEARIREGQGAQVVTCNPEMIMQAQRDLAFAQVLQAAELVIPDGIGVVWALR RQGIRVQRVPGIELAETLIPLAAERGWRLALVGGRPEVNRAAIRYWQAQCPALALWGYHGYFSSEEEKELLQALQEFRPQ LVWVGLGSPRQELWIQKWRPLLPQAIWMGVGGSLDIWAGQKRRAPRWWRDHHLEWLYRLYQEPWRWRRMLALPSFVWRVL WDPSSRLRP >Mature_248_residues SLSIHAILGVNLHLALPEASLQSYATWIEARIREGQGAQVVTCNPEMIMQAQRDLAFAQVLQAAELVIPDGIGVVWALRR QGIRVQRVPGIELAETLIPLAAERGWRLALVGGRPEVNRAAIRYWQAQCPALALWGYHGYFSSEEEKELLQALQEFRPQL VWVGLGSPRQELWIQKWRPLLPQAIWMGVGGSLDIWAGQKRRAPRWWRDHHLEWLYRLYQEPWRWRRMLALPSFVWRVLW DPSSRLRP
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=202, Percent_Identity=32.6732673267327, Blast_Score=117, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 28887; Mature: 28756
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSIHAILGVNLHLALPEASLQSYATWIEARIREGQGAQVVTCNPEMIMQAQRDLAFAQ CCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH VLQAAELVIPDGIGVVWALRRQGIRVQRVPGIELAETLIPLAAERGWRLALVGGRPEVNR HHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH AAIRYWQAQCPALALWGYHGYFSSEEEKELLQALQEFRPQLVWVGLGSPRQELWIQKWRP HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH LLPQAIWMGVGGSLDIWAGQKRRAPRWWRDHHLEWLYRLYQEPWRWRRMLALPSFVWRVL HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH WDPSSRLRP CCCHHCCCC >Mature Secondary Structure SLSIHAILGVNLHLALPEASLQSYATWIEARIREGQGAQVVTCNPEMIMQAQRDLAFAQ CEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH VLQAAELVIPDGIGVVWALRRQGIRVQRVPGIELAETLIPLAAERGWRLALVGGRPEVNR HHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH AAIRYWQAQCPALALWGYHGYFSSEEEKELLQALQEFRPQLVWVGLGSPRQELWIQKWRP HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH LLPQAIWMGVGGSLDIWAGQKRRAPRWWRDHHLEWLYRLYQEPWRWRRMLALPSFVWRVL HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH WDPSSRLRP CCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]