| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ftsX [H]
Identifier: 86609336
GI number: 86609336
Start: 1964805
End: 1965716
Strand: Reverse
Name: ftsX [H]
Synonym: CYB_1880
Alternate gene names: 86609336
Gene position: 1965716-1964805 (Counterclockwise)
Preceding gene: 86609337
Following gene: 86609335
Centisome position: 64.52
GC content: 59.87
Gene sequence:
>912_bases ATGCAATCTCTCTCCCGATTTCTCAATAAAATCCGCTATCTCCTACAGGAGACTTTTTTGGGGTTGCGGCGGGGGGGCTG GCTGAACTGGGCCGCTGTGAGCACCCTGCTGGTGTTGCTGTTCTTGGTGGGGATCGGCGTTGAGCTGTCCTGGGGCCTGG ATGCCACGGTGCAGTCGCTGGGAGGACAACTGGAGATCTCCGTCTACCTGGAGCCGGAACGGCAGGGGGTGGAGCTGCAA CCTCAGGTCGCCCAACTGCCTCATGTGGCCGAGGTGAAGGTCATCACCAAAGACCAAGCTTGGCGCACCCTCTTGATCGA GATGGGGATCCAAGACGAGGCGGCCATGGAAACCCAGTTGGGGGAGAACCCCTTGGTGGATGCTCTGCGGGTTAAGGCGG ATTCCACCGAAGCCTTGGGGGAAGTGGCGGAGCAGATTCGCCAACTGGAAGGGGTGGATGAGGTCTACTACGGCGACCGC ATTGTGGAGCAACTGGCCCAGCTCCAGGACATGCTACGGCTGGGATCCCTGACCATTACCGGCGTGTTGGCCCTGACAGC GGTGGCGGTCATCACCACCACCATTCGCCTCATCGTCATGGCGCGGCGGCGGGAGATCGAGGTGATGCAATTGGTGGGGG CGACGGCAGCCTGGATTTACTTGCCCTTTATTTTGCAAGGGTGCCTGTTTGGGGTGATCAGCGCAGTGGGAGCTTGGGGA TTGATCTTGGGATCCCAGCAGTTGCTGCAGGAGCTGCTGGAGCAGTTGATTGTCTTGCCCTTCCTCAAGGTGATGCAGGC AGATCGCAGCCAACTGGAGTTTTGGCTCTTGCCGTCGATGTTGTTGGGGATGGGGGTTTTTCTGGGCACCACCAGCAGCT TGATCGCGGTGCGCAAGTCGGCAGGGCGATGA
Upstream 100 bases:
>100_bases GCGCTGAGGGCTGCCGGGATCCCTATTTTGCTCTCCACAGGCTCTGTTGAGCTCCAGGGGGCAAGGGTCTGAGCCCATTG ATTGTTGGATGGAGAACAGC
Downstream 100 bases:
>100_bases GCTGGAGGCGATGCTGAGGAAAGCCCTGGATATTCCAATCTGAGGATCGCCATAGGATAAGATGATGGACTCTACTTCCC TGGCTTTCCAAGATCTGGCC
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MQSLSRFLNKIRYLLQETFLGLRRGGWLNWAAVSTLLVLLFLVGIGVELSWGLDATVQSLGGQLEISVYLEPERQGVELQ PQVAQLPHVAEVKVITKDQAWRTLLIEMGIQDEAAMETQLGENPLVDALRVKADSTEALGEVAEQIRQLEGVDEVYYGDR IVEQLAQLQDMLRLGSLTITGVLALTAVAVITTTIRLIVMARRREIEVMQLVGATAAWIYLPFILQGCLFGVISAVGAWG LILGSQQLLQELLEQLIVLPFLKVMQADRSQLEFWLLPSMLLGMGVFLGTTSSLIAVRKSAGR
Sequences:
>Translated_303_residues MQSLSRFLNKIRYLLQETFLGLRRGGWLNWAAVSTLLVLLFLVGIGVELSWGLDATVQSLGGQLEISVYLEPERQGVELQ PQVAQLPHVAEVKVITKDQAWRTLLIEMGIQDEAAMETQLGENPLVDALRVKADSTEALGEVAEQIRQLEGVDEVYYGDR IVEQLAQLQDMLRLGSLTITGVLALTAVAVITTTIRLIVMARRREIEVMQLVGATAAWIYLPFILQGCLFGVISAVGAWG LILGSQQLLQELLEQLIVLPFLKVMQADRSQLEFWLLPSMLLGMGVFLGTTSSLIAVRKSAGR >Mature_303_residues MQSLSRFLNKIRYLLQETFLGLRRGGWLNWAAVSTLLVLLFLVGIGVELSWGLDATVQSLGGQLEISVYLEPERQGVELQ PQVAQLPHVAEVKVITKDQAWRTLLIEMGIQDEAAMETQLGENPLVDALRVKADSTEALGEVAEQIRQLEGVDEVYYGDR IVEQLAQLQDMLRLGSLTITGVLALTAVAVITTTIRLIVMARRREIEVMQLVGATAAWIYLPFILQGCLFGVISAVGAWG LILGSQQLLQELLEQLIVLPFLKVMQADRSQLEFWLLPSMLLGMGVFLGTTSSLIAVRKSAGR
Specific function: Part of the ABC transporter ftsEX involved in sporulation. May act as an importer, possibly at the top of a hierarchical cascade leading to the correct temporal initiation of sporulation. Acts upstream of the histidine kinases KinA, KinB and KInC, the Rap
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable). Note=Unlike the E.coli ortholog, localization is not restricted to division septa, nor is it dependent on ftsZ [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789872, Length=237, Percent_Identity=27.8481012658228, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 33454; Mature: 33454
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLSRFLNKIRYLLQETFLGLRRGGWLNWAAVSTLLVLLFLVGIGVELSWGLDATVQSL CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHC GGQLEISVYLEPERQGVELQPQVAQLPHVAEVKVITKDQAWRTLLIEMGIQDEAAMETQL CCEEEEEEEECCCCCCCCCCCHHHHCCCHHHEEEEECCHHHHHHHHHHCCCCHHHHHHHC GENPLVDALRVKADSTEALGEVAEQIRQLEGVDEVYYGDRIVEQLAQLQDMLRLGSLTIT CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLALTAVAVITTTIRLIVMARRREIEVMQLVGATAAWIYLPFILQGCLFGVISAVGAWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGSQQLLQELLEQLIVLPFLKVMQADRSQLEFWLLPSMLLGMGVFLGTTSSLIAVRKS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AGR CCC >Mature Secondary Structure MQSLSRFLNKIRYLLQETFLGLRRGGWLNWAAVSTLLVLLFLVGIGVELSWGLDATVQSL CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHC GGQLEISVYLEPERQGVELQPQVAQLPHVAEVKVITKDQAWRTLLIEMGIQDEAAMETQL CCEEEEEEEECCCCCCCCCCCHHHHCCCHHHEEEEECCHHHHHHHHHHCCCCHHHHHHHC GENPLVDALRVKADSTEALGEVAEQIRQLEGVDEVYYGDRIVEQLAQLQDMLRLGSLTIT CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLALTAVAVITTTIRLIVMARRREIEVMQLVGATAAWIYLPFILQGCLFGVISAVGAWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGSQQLLQELLEQLIVLPFLKVMQADRSQLEFWLLPSMLLGMGVFLGTTSSLIAVRKS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AGR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]