Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609324

Identifier: 86609324

GI number: 86609324

Start: 1951691

End: 1952341

Strand: Reverse

Name: 86609324

Synonym: CYB_1868

Alternate gene names: NA

Gene position: 1952341-1951691 (Counterclockwise)

Preceding gene: 86609326

Following gene: 86609323

Centisome position: 64.08

GC content: 58.37

Gene sequence:

>651_bases
ATGGTGGTGCTCAAGGATTGGCAGCGCTCCAAGTTGGATCCCAGCGACGATGCCCTCTTTTACAGCTATCCTCGCTTCGT
GACTCATGTGGATTCTGGCTTCATCGGCCAGCTCACCGATCTATACCGCGAGCATTTGCGGCCCCAGACCCGGATTCTCG
ATCTGATGAGCAGTTGGGTCTCCCATTTGCCGCCTGAGATGGAGTTTGCCCATGTGGAGGGGCATGGGATGAACCCGGAG
GAACTGGCGGCCAACCCCCGGCTGGATCACTTCTTCATCCAGAACTTGAACCAAAACCCAAGTCTGCCCTTCCCTGATCA
ATCCTTCGACGCGGTGCTAAACACGGTCTCGGTGCAATATCTGCAGCAGCCAGAGCAGGTGTTTGCCGAGGTGTATCGCA
TTCTAAAGCCCCAGGGCCTGTTCATCGTCAGCTTCTCCAATCGCATGTTTTTCCAGAAGGCGATCCAGGCTTGGCGGGAC
AACTCTGAGGCGGGGCGGGTGGAGTTGGTCAGGCGCTATTTTGAGTCGGTGCCAGGGTTTGCGGTGGTGAAGGTGATCCA
GCGGCCTGCCCCTATGGGTTGGCTGGGCTTTTGGGCAGGCGGAGGCGGGGATCCCTTCTATGCCCTGATTGGACAGCGGA
CGGCGGGGTAG

Upstream 100 bases:

>100_bases
TCGCGAAATGGCCACTGTTGCTCTGCTAAGGTATCACGCCCACCCCTTTTCCGAAGCTTCCAAAATGTTAGCTTTGATTA
AGATTTGCAACCGTTTGGCC

Downstream 100 bases:

>100_bases
AATTCTCCAGCTTGCCTGTGGCGTGCAGGCGGGATCCTTGGAAATATCCAACAAGAACCCATCATCCATCAGCTTTTTCA
GCTTTGCTATCCTCGCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MVVLKDWQRSKLDPSDDALFYSYPRFVTHVDSGFIGQLTDLYREHLRPQTRILDLMSSWVSHLPPEMEFAHVEGHGMNPE
ELAANPRLDHFFIQNLNQNPSLPFPDQSFDAVLNTVSVQYLQQPEQVFAEVYRILKPQGLFIVSFSNRMFFQKAIQAWRD
NSEAGRVELVRRYFESVPGFAVVKVIQRPAPMGWLGFWAGGGGDPFYALIGQRTAG

Sequences:

>Translated_216_residues
MVVLKDWQRSKLDPSDDALFYSYPRFVTHVDSGFIGQLTDLYREHLRPQTRILDLMSSWVSHLPPEMEFAHVEGHGMNPE
ELAANPRLDHFFIQNLNQNPSLPFPDQSFDAVLNTVSVQYLQQPEQVFAEVYRILKPQGLFIVSFSNRMFFQKAIQAWRD
NSEAGRVELVRRYFESVPGFAVVKVIQRPAPMGWLGFWAGGGGDPFYALIGQRTAG
>Mature_216_residues
MVVLKDWQRSKLDPSDDALFYSYPRFVTHVDSGFIGQLTDLYREHLRPQTRILDLMSSWVSHLPPEMEFAHVEGHGMNPE
ELAANPRLDHFFIQNLNQNPSLPFPDQSFDAVLNTVSVQYLQQPEQVFAEVYRILKPQGLFIVSFSNRMFFQKAIQAWRD
NSEAGRVELVRRYFESVPGFAVVKVIQRPAPMGWLGFWAGGGGDPFYALIGQRTAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24749; Mature: 24749

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVLKDWQRSKLDPSDDALFYSYPRFVTHVDSGFIGQLTDLYREHLRPQTRILDLMSSWV
CEEECCCCCCCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
SHLPPEMEFAHVEGHGMNPEELAANPRLDHFFIQNLNQNPSLPFPDQSFDAVLNTVSVQY
HHCCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
LQQPEQVFAEVYRILKPQGLFIVSFSNRMFFQKAIQAWRDNSEAGRVELVRRYFESVPGF
HHCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH
AVVKVIQRPAPMGWLGFWAGGGGDPFYALIGQRTAG
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MVVLKDWQRSKLDPSDDALFYSYPRFVTHVDSGFIGQLTDLYREHLRPQTRILDLMSSWV
CEEECCCCCCCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
SHLPPEMEFAHVEGHGMNPEELAANPRLDHFFIQNLNQNPSLPFPDQSFDAVLNTVSVQY
HHCCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
LQQPEQVFAEVYRILKPQGLFIVSFSNRMFFQKAIQAWRDNSEAGRVELVRRYFESVPGF
HHCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH
AVVKVIQRPAPMGWLGFWAGGGGDPFYALIGQRTAG
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA