Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is kch [C]

Identifier: 86609264

GI number: 86609264

Start: 1890422

End: 1891471

Strand: Direct

Name: kch [C]

Synonym: CYB_1806

Alternate gene names: 86609264

Gene position: 1890422-1891471 (Clockwise)

Preceding gene: 86609262

Following gene: 86609271

Centisome position: 62.05

GC content: 59.71

Gene sequence:

>1050_bases
ATGGCTTCTGCTCGTCCCCCCTTCCAGGCTGCCAAAAGGGATCCCGGGATCCGGCGAGACCTCGGCTTGGGTGTGGGGGC
ATTGGTGTGTGTGGTGCTGATCGGCACCCTCTGGTACCACGGGGTGGAGCAGTGGCCTTGGGTGGAAGCTTTTTACATGA
CCGTTATCACCCTAACCACCGTGGGCTTCATGGAGGTGGGGCCGCTGGGGGAGCGGGGGCGTTTATTTACGGTGGCCTTG
ATCCTGATGGGGGTCTTGAGCATTGGGTTCATGGTGAATCGCTTTACAGAGGCCCTCATCCAGGGACATTTTCAGGAAGG
GATCCGGCAACGGAAATGGAAGAAACAGATGGAAGCGCTGAACAACCACTACATCATTTGCGGTTTCGGGCGCATTGGGC
GGCAGGTGGCTCAAGAGTTTCGAGCAGAAGGGGTGCCATTTTTGGTGATCGATCAGTCTGCTGAGGCGATTCAGGTGGCT
CAAGAGCTGGGATATGTGGCTCTCCAGGGGGATAGTACTCTGGATGCCACTTTGCTCGAAGCGCGGGTGCAACAGGCGGA
GGGGCTGATTGCCGCCCTGTCTTCCGATGCCGAGAACCTCTACGTGGTCTTGTCGGCCCGCACCTTGAACCCCCGCATTC
GCACCATTGCCCGCGCCAATACGGAGGAGGCTTTGCAAAAACTGCAGCGGGCGGGCGTTGCCCATGCCATTTCTCCTTAC
ATCACGGGCGGAAAACGCATGGCGGCGGCTGCCCTGCGTCCTCGGGTTGTGGACTTTGTGGATGGCATCCTTGCCGGTCG
GGATCGCACTTTCTACCTGGAGGAGTACGAGCTGGCAGCCCAAGAATGTCCTTATGTCGGGCAAACCCTACGGAAAGCCG
ATTTGCGCAACCGATCCGGAGCTTTAGTGGTGGCAATCCGGCGGGCCGATGGCCAGTTGATCGGTGGCCCCAGCGGAGAA
ACCCTGTTGCAGCCGGGGGATCTGCTGCTGTGTATGGGCACTGCAGAGCAGTTGCGCCGGCTTGGTCAGCTGCTCTATCC
ACGCCCGTAG

Upstream 100 bases:

>100_bases
GTATTCAGGCATCCGCACTCCACTTGTTACCGAACAACAACGGGTTCTTCCCCATTCTAGTTCTTGCTTCCTTTTCCTGG
GCTAGATCTGGCTGGGCTCT

Downstream 100 bases:

>100_bases
CAGCCCGTTCTCCACCTGGGTAGCCTGGCTCAAATCCGCCTCAGAATACTGGGGCCATGAGAGTCGGTGCCACAGGTTTT
CAAAAGTCCGTAGGTCTCGG

Product: VIC family potassium channel protein

Products: K (I) [Cytoplasm] [C]

Alternate protein names: MjK1 [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MASARPPFQAAKRDPGIRRDLGLGVGALVCVVLIGTLWYHGVEQWPWVEAFYMTVITLTTVGFMEVGPLGERGRLFTVAL
ILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEALNNHYIICGFGRIGRQVAQEFRAEGVPFLVIDQSAEAIQVA
QELGYVALQGDSTLDATLLEARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPY
ITGGKRMAAAALRPRVVDFVDGILAGRDRTFYLEEYELAAQECPYVGQTLRKADLRNRSGALVVAIRRADGQLIGGPSGE
TLLQPGDLLLCMGTAEQLRRLGQLLYPRP

Sequences:

>Translated_349_residues
MASARPPFQAAKRDPGIRRDLGLGVGALVCVVLIGTLWYHGVEQWPWVEAFYMTVITLTTVGFMEVGPLGERGRLFTVAL
ILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEALNNHYIICGFGRIGRQVAQEFRAEGVPFLVIDQSAEAIQVA
QELGYVALQGDSTLDATLLEARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPY
ITGGKRMAAAALRPRVVDFVDGILAGRDRTFYLEEYELAAQECPYVGQTLRKADLRNRSGALVVAIRRADGQLIGGPSGE
TLLQPGDLLLCMGTAEQLRRLGQLLYPRP
>Mature_348_residues
ASARPPFQAAKRDPGIRRDLGLGVGALVCVVLIGTLWYHGVEQWPWVEAFYMTVITLTTVGFMEVGPLGERGRLFTVALI
LMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEALNNHYIICGFGRIGRQVAQEFRAEGVPFLVIDQSAEAIQVAQ
ELGYVALQGDSTLDATLLEARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPYI
TGGKRMAAAALRPRVVDFVDGILAGRDRTFYLEEYELAAQECPYVGQTLRKADLRNRSGALVVAIRRADGQLIGGPSGET
LLQPGDLLLCMGTAEQLRRLGQLLYPRP

Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787503, Length=205, Percent_Identity=25.8536585365854, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR003280
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 38345; Mature: 38214

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASARPPFQAAKRDPGIRRDLGLGVGALVCVVLIGTLWYHGVEQWPWVEAFYMTVITLTT
CCCCCCCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGFMEVGPLGERGRLFTVALILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEAL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNHYIICGFGRIGRQVAQEFRAEGVPFLVIDQSAEAIQVAQELGYVALQGDSTLDATLLE
CCCEEEEECHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCEEEEECCCCHHHHHHH
ARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPY
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHCHH
ITGGKRMAAAALRPRVVDFVDGILAGRDRTFYLEEYELAAQECPYVGQTLRKADLRNRSG
HCCCHHHHHHHHCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCC
ALVVAIRRADGQLIGGPSGETLLQPGDLLLCMGTAEQLRRLGQLLYPRP
CEEEEEEECCCCEECCCCCCCEECCCCEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASARPPFQAAKRDPGIRRDLGLGVGALVCVVLIGTLWYHGVEQWPWVEAFYMTVITLTT
CCCCCCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGFMEVGPLGERGRLFTVALILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEAL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNHYIICGFGRIGRQVAQEFRAEGVPFLVIDQSAEAIQVAQELGYVALQGDSTLDATLLE
CCCEEEEECHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCEEEEECCCCHHHHHHH
ARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPY
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHCHH
ITGGKRMAAAALRPRVVDFVDGILAGRDRTFYLEEYELAAQECPYVGQTLRKADLRNRSG
HCCCHHHHHHHHCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCC
ALVVAIRRADGQLIGGPSGETLLQPGDLLLCMGTAEQLRRLGQLLYPRP
CEEEEEEECCCCEECCCCCCCEECCCCEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]