Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609226

Identifier: 86609226

GI number: 86609226

Start: 1852691

End: 1853497

Strand: Direct

Name: 86609226

Synonym: CYB_1768

Alternate gene names: NA

Gene position: 1852691-1853497 (Clockwise)

Preceding gene: 86609225

Following gene: 86609228

Centisome position: 60.81

GC content: 61.34

Gene sequence:

>807_bases
GTGAATAGTCAGAGCCAAGACCGCTTAGACCGGGTGGAACAACTGCTGGCTTGGACGGCTGAACAGACTGCTGCCAACAG
CCGAGAAATCCGGGAGCTCTGCCAATCCATCCAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGG
AGAACGCCGCCCGTCTGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGGAGAAC
GCCGCCCGTCTGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGGAGAACGCCGC
CCGTCTGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGGAGAACGCCGCCCGTC
TGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCACCCAGTCTGCCGAGGAGAACGCCGCCCGTCTGCGG
GAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCGAATTTGCCGAACAAGCTGCTGCCCAAGCTCAAGGCCT
GCGAGAGCTACAGCAAGTTGTCAGCGAGACCCGCTCTGACTTAGCTCACCTTGCCGAGTGGGCAGAGGAAGTGACTCAAG
CTCTGGTTACCCTCACCGCTCTACAACGAGAGCACGAACGCGCCATCCAGGCCATCAACCAACGGCAGGCGGAAACGGAT
CAGAGGTTCAACGTTCTCCTTGAAGAAGTGCGCTACCTGATTCGCCGGCAAGGCTCTGACGGAAATCCTCCCCCCTCGTT
GCCCTGA

Upstream 100 bases:

>100_bases
GCTCTGGGAATGACCATTCCCCCTATCCTGTTTGGCAGAGCTCTACTTCGTTTATGATCGGTTGCAGTTTGTCAAGAGAC
TCACAAGGCGAGGCATCGGA

Downstream 100 bases:

>100_bases
GCACTGGGATCCCTTTAAGAACTGCAAGGACAGCCCTAATCTTCATCCACTTCCCACTCCAACAGGTGTGCATAGGGAGC
CACTAAGTGGGGAGCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEEN
AARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLR
EIEELRQSIQESRAEFAEQAAAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD
QRFNVLLEEVRYLIRRQGSDGNPPPSLP

Sequences:

>Translated_268_residues
MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEEN
AARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLR
EIEELRQSIQESRAEFAEQAAAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD
QRFNVLLEEVRYLIRRQGSDGNPPPSLP
>Mature_268_residues
MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEEN
AARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLR
EIEELRQSIQESRAEFAEQAAAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD
QRFNVLLEEVRYLIRRQGSDGNPPPSLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30844; Mature: 30844

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLR
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLREIEELRQSIQESRAEFAEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFNVLLEEVRYLIRRQGSDGNPPPSLP
HHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLR
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLREIEELRQSIQESRAEFAEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFNVLLEEVRYLIRRQGSDGNPPPSLP
HHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA