| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609226
Identifier: 86609226
GI number: 86609226
Start: 1852691
End: 1853497
Strand: Direct
Name: 86609226
Synonym: CYB_1768
Alternate gene names: NA
Gene position: 1852691-1853497 (Clockwise)
Preceding gene: 86609225
Following gene: 86609228
Centisome position: 60.81
GC content: 61.34
Gene sequence:
>807_bases GTGAATAGTCAGAGCCAAGACCGCTTAGACCGGGTGGAACAACTGCTGGCTTGGACGGCTGAACAGACTGCTGCCAACAG CCGAGAAATCCGGGAGCTCTGCCAATCCATCCAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGG AGAACGCCGCCCGTCTGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGGAGAAC GCCGCCCGTCTGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGGAGAACGCCGC CCGTCTGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCCAGTCTGCCGAGGAGAACGCCGCCCGTC TGCGGGAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCACCCAGTCTGCCGAGGAGAACGCCGCCCGTCTGCGG GAAATCGAGGAGCTGCGTCAGTCCATCCAAGAAAGCCGCGCCGAATTTGCCGAACAAGCTGCTGCCCAAGCTCAAGGCCT GCGAGAGCTACAGCAAGTTGTCAGCGAGACCCGCTCTGACTTAGCTCACCTTGCCGAGTGGGCAGAGGAAGTGACTCAAG CTCTGGTTACCCTCACCGCTCTACAACGAGAGCACGAACGCGCCATCCAGGCCATCAACCAACGGCAGGCGGAAACGGAT CAGAGGTTCAACGTTCTCCTTGAAGAAGTGCGCTACCTGATTCGCCGGCAAGGCTCTGACGGAAATCCTCCCCCCTCGTT GCCCTGA
Upstream 100 bases:
>100_bases GCTCTGGGAATGACCATTCCCCCTATCCTGTTTGGCAGAGCTCTACTTCGTTTATGATCGGTTGCAGTTTGTCAAGAGAC TCACAAGGCGAGGCATCGGA
Downstream 100 bases:
>100_bases GCACTGGGATCCCTTTAAGAACTGCAAGGACAGCCCTAATCTTCATCCACTTCCCACTCCAACAGGTGTGCATAGGGAGC CACTAAGTGGGGAGCATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEEN AARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLR EIEELRQSIQESRAEFAEQAAAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD QRFNVLLEEVRYLIRRQGSDGNPPPSLP
Sequences:
>Translated_268_residues MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEEN AARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLR EIEELRQSIQESRAEFAEQAAAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD QRFNVLLEEVRYLIRRQGSDGNPPPSLP >Mature_268_residues MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEEN AARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLR EIEELRQSIQESRAEFAEQAAAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD QRFNVLLEEVRYLIRRQGSDGNPPPSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30844; Mature: 30844
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLR CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLREIEELRQSIQESRAEFAEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRFNVLLEEVRYLIRRQGSDGNPPPSLP HHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNSQSQDRLDRVEQLLAWTAEQTAANSREIRELCQSIQELRQSIQESRAQSAEENAARLR CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIEELRQSIQESRAQSAEENAARLREIEELRQSIQESRAQSAEENAARLREIEELRQSIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESRAQSAEENAARLREIEELRQSIQESRTQSAEENAARLREIEELRQSIQESRAEFAEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQAQGLRELQQVVSETRSDLAHLAEWAEEVTQALVTLTALQREHERAIQAINQRQAETD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRFNVLLEEVRYLIRRQGSDGNPPPSLP HHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA