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The map label for this gene is secF [H]

Identifier: 86609215

GI number: 86609215

Start: 1839900

End: 1840901

Strand: Reverse

Name: secF [H]

Synonym: CYB_1757

Alternate gene names: 86609215

Gene position: 1840901-1839900 (Counterclockwise)

Preceding gene: 86609216

Following gene: 86609214

Centisome position: 60.42

GC content: 60.58

Gene sequence:

>1002_bases
ATGACGGCTCAAGAGCTATCCCCCGTAGATCCCGCCTCTCGGTTGCTCGACTATCGCTTCGACATTGTTGGACGGAGCAA
GCTGTGGTTCAGCTTGTCCTTGGCGGTGCTGCTGGTGGGGCTGGTCAGCATGGCCTTTTCCCTAGCTTCTCTGGGAACCC
CCCTGCGGCTGGGGTTGGATTTTTCCGGCGGCACTTTGCTGGATCTGAGCTTTGAGCGGCCTGTCACCACCGAGGAGCTG
CGGCGGGCGCTGCAGGAACACAACCTGGGGAGCAGCATCATTCAACTGGACACCCAGACGGGCCAGGAAGCCCTGATCCG
CATGCCCCCTTTGTCGGAGACGGAGCGCTTGGCCGTGGAAGCCACCCTGCGGCAGGAGGTTGCCCCCTTCCAGCGCAACC
TGGTGGAGACAGTGGGCCCGACGGTGGGTCGTCTGCTCCTGCGTTCCGGCATCGTGGCCGTGCTCATCTCTTTCGGGCTC
ATCGTGCTGTACCTGGCCCTGCGCTTCCAGTGGGATTACGCGGTGTTTGCCATTGTGGCGCTGCTGCACGATGTAGTGTT
GACGATAGGGCTATTTGCCCTTTTGGGCCTGACGGTGGGTATGGAGGCGGACAGCCTGTTTGTGGTGGCGCTGCTGACCA
TCATCGGCTTTTCCGTCAACGACACCGTGGTCATCTACGACCGCATCCGCGAGAATCTGCGTCTGGTGAGCCGCAAGGTC
AGCCTGGCCGAGGTGGTAAACCTATCTCTGAACCAGACCTTTGCCCGCTCCCTGAACACCACTCTGACGACGATGCTGCC
CCTAGTTGCCATCGCCATTTTCGGGGGAGCTACCTTGAAGGGGTTTGCCATTGCCCTGCTCATTGGCTTTACTTTGGGGG
TGTATTCCAGCATTTTTATCGCCAGCCCCCTGTTGGTGTGGTGGCGGCAGCAGCGCTATGGCAAAAGTAGCGAAGATGCC
CGCGCAGGCAGGGATCCCGATTCACTTCCCTCTGAGGGCTAG

Upstream 100 bases:

>100_bases
CGGCCATCACCTGCACCCGTAGCCTGCTCTTGGCGGCAATGGGGATCCCCAGCTTGCGCAAACCTGAGTTTTACGGCGTT
CGGATGGAGACAGCTCAATC

Downstream 100 bases:

>100_bases
GTCGTGTTGATCTTATGTTAGGATAGAGAGAATAATTTATAGAGGAAAGAGGATGAAGTTGGTTTTTTTAGATGAAAACA
AATGGCAGAAGATATTGGCT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTAQELSPVDPASRLLDYRFDIVGRSKLWFSLSLAVLLVGLVSMAFSLASLGTPLRLGLDFSGGTLLDLSFERPVTTEEL
RRALQEHNLGSSIIQLDTQTGQEALIRMPPLSETERLAVEATLRQEVAPFQRNLVETVGPTVGRLLLRSGIVAVLISFGL
IVLYLALRFQWDYAVFAIVALLHDVVLTIGLFALLGLTVGMEADSLFVVALLTIIGFSVNDTVVIYDRIRENLRLVSRKV
SLAEVVNLSLNQTFARSLNTTLTTMLPLVAIAIFGGATLKGFAIALLIGFTLGVYSSIFIASPLLVWWRQQRYGKSSEDA
RAGRDPDSLPSEG

Sequences:

>Translated_333_residues
MTAQELSPVDPASRLLDYRFDIVGRSKLWFSLSLAVLLVGLVSMAFSLASLGTPLRLGLDFSGGTLLDLSFERPVTTEEL
RRALQEHNLGSSIIQLDTQTGQEALIRMPPLSETERLAVEATLRQEVAPFQRNLVETVGPTVGRLLLRSGIVAVLISFGL
IVLYLALRFQWDYAVFAIVALLHDVVLTIGLFALLGLTVGMEADSLFVVALLTIIGFSVNDTVVIYDRIRENLRLVSRKV
SLAEVVNLSLNQTFARSLNTTLTTMLPLVAIAIFGGATLKGFAIALLIGFTLGVYSSIFIASPLLVWWRQQRYGKSSEDA
RAGRDPDSLPSEG
>Mature_332_residues
TAQELSPVDPASRLLDYRFDIVGRSKLWFSLSLAVLLVGLVSMAFSLASLGTPLRLGLDFSGGTLLDLSFERPVTTEELR
RALQEHNLGSSIIQLDTQTGQEALIRMPPLSETERLAVEATLRQEVAPFQRNLVETVGPTVGRLLLRSGIVAVLISFGLI
VLYLALRFQWDYAVFAIVALLHDVVLTIGLFALLGLTVGMEADSLFVVALLTIIGFSVNDTVVIYDRIRENLRLVSRKVS
LAEVVNLSLNQTFARSLNTTLTTMLPLVAIAIFGGATLKGFAIALLIGFTLGVYSSIFIASPLLVWWRQQRYGKSSEDAR
AGRDPDSLPSEG

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=257, Percent_Identity=35.408560311284, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786609, Length=173, Percent_Identity=24.8554913294798, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 36365; Mature: 36234

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQELSPVDPASRLLDYRFDIVGRSKLWFSLSLAVLLVGLVSMAFSLASLGTPLRLGLD
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
FSGGTLLDLSFERPVTTEELRRALQEHNLGSSIIQLDTQTGQEALIRMPPLSETERLAVE
CCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHEEEECCCCCHHEEECCCCCCHHHHHHH
ATLRQEVAPFQRNLVETVGPTVGRLLLRSGIVAVLISFGLIVLYLALRFQWDYAVFAIVA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LLHDVVLTIGLFALLGLTVGMEADSLFVVALLTIIGFSVNDTVVIYDRIRENLRLVSRKV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
SLAEVVNLSLNQTFARSLNTTLTTMLPLVAIAIFGGATLKGFAIALLIGFTLGVYSSIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ASPLLVWWRQQRYGKSSEDARAGRDPDSLPSEG
HHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TAQELSPVDPASRLLDYRFDIVGRSKLWFSLSLAVLLVGLVSMAFSLASLGTPLRLGLD
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
FSGGTLLDLSFERPVTTEELRRALQEHNLGSSIIQLDTQTGQEALIRMPPLSETERLAVE
CCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHEEEECCCCCHHEEECCCCCCHHHHHHH
ATLRQEVAPFQRNLVETVGPTVGRLLLRSGIVAVLISFGLIVLYLALRFQWDYAVFAIVA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LLHDVVLTIGLFALLGLTVGMEADSLFVVALLTIIGFSVNDTVVIYDRIRENLRLVSRKV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
SLAEVVNLSLNQTFARSLNTTLTTMLPLVAIAIFGGATLKGFAIALLIGFTLGVYSSIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ASPLLVWWRQQRYGKSSEDARAGRDPDSLPSEG
HHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]