| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ahcY [H]
Identifier: 86609209
GI number: 86609209
Start: 1833865
End: 1835145
Strand: Direct
Name: ahcY [H]
Synonym: CYB_1751
Alternate gene names: 86609209
Gene position: 1833865-1835145 (Clockwise)
Preceding gene: 86609206
Following gene: 86609211
Centisome position: 60.19
GC content: 63.08
Gene sequence:
>1281_bases ATGACCAGCGCTACCCTGTCTCTCCCGAAGCATGAAGTGAAAGATCTGAACCTCGCCCCCCTGGGCAAGCAACGGATCCA GTGGGCGGCGCGGGAGATGCCGGTGCTGGCCCAGATCCGGGAGCGCTTTGCTCAAGAAAAGCCCTTTGCCGGGCTGCGCT TGGTGGCCTGCTGCCACATTACGACCGAAACGGCCAACCTGGCCCTGGCTCTACAAGCAGGGGGGGCGGATAGCGTTCTC ATTGCCAGCAATCCCCTTTCCACCCAAGACGATGTGGCCGCCAGCCTGGTGGCGGACCATGGCATTTCGGTGTTTGCCCT CAAAGGAGAAGATGTGGCCACCTACCGCCGCCATGTCCAGATTGCCCTAGATCACCGCCCCAACCTGATTATCGACGATG GCGGAGATGTGACGGCGGAGCTGGTGCAGCACCGTCAGGAGCAACTGTCGGAGCTCATCGGCACCACGGAAGAGACCACC ACTGGCCTGGTGCGCCTTAGGGCCATGCTCAAGGCGGGGGTGCTCAGCTTCCCGGTGATGACCGTCAACGACGCCGAGAC CAAACACCTGTTCGACAACCGCTACGGCACCGGCCAATCCACCCTGGACGGGATCCTGCGCTGTACCAACATCCTTCTGG CCGGGAAGACGGTGGTGGTGGCTGGCTACGGCTGGTGCGCCAAGGGAGTGGCCATGCGGGCCCGCGGCATGGGATCCCAG GTGATTGTCACGGAAGTCAACCCGGTGCGGGCTCTGGAGGCGGTGATGGACGGCTTCCGGGTGATGCCGATGGAAGAAGC CGCTGCTCTGGGGGACATCTTCATCACCGTCACCGGCAACAAGCACGTGATTCGCGGCGAGCACTTCGACCGCATGAAGG ATGGGGCGATGGTCTGCAACGCCGGCCACTTTGACATTGAAATCGACCTGGTGGCGCTGCAGGAGCGGGCCGTCTCCCGA CAGACGGTGCGCCCCTTTGTGGAAGAATACCGTCTGCAGTCGGGCAAGTCAGTGGTGGTGCTGGGGGAAGGCCGCCTGAT TAACTTGGCTGCTGCCGAAGGGCACCCCGCCAGCGTCATGGACATGAGCTTTGCCAACCAGGCCCTGGCCTGCGAATACC TGGTGAAAAACCGGGGCCGCTTGGCCCCAGGGCTTCACCCCATTCCTCTCGAGGTGGACGAGGCCATCGCCCGCCTCAAG CTCAAGGCCATGGGGATCCAAATCGACAGCCTCACCCCCGAGCAGATCGAGTACGGCAACACCTGGACTGCCGGGACTTG A
Upstream 100 bases:
>100_bases CGACATCCTTGCTGATCTTTATGGCTGCCTGGCCCCCTTTGGGGCTTGCAGTTTCCGTTCCCCTATCCTCTCTCGATGAC CCTGTTTGGAGCAACACTCG
Downstream 100 bases:
>100_bases GGGTGGGTGCTGGCGCTACGAACCTGAGATACATCCTAAAACCTGTCGCACCTGGGCCAACTCGTCAGCAGGGAGGCGAG CTTTCAACTCCTTCTCCCAG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTSATLSLPKHEVKDLNLAPLGKQRIQWAAREMPVLAQIRERFAQEKPFAGLRLVACCHITTETANLALALQAGGADSVL IASNPLSTQDDVAASLVADHGISVFALKGEDVATYRRHVQIALDHRPNLIIDDGGDVTAELVQHRQEQLSELIGTTEETT TGLVRLRAMLKAGVLSFPVMTVNDAETKHLFDNRYGTGQSTLDGILRCTNILLAGKTVVVAGYGWCAKGVAMRARGMGSQ VIVTEVNPVRALEAVMDGFRVMPMEEAAALGDIFITVTGNKHVIRGEHFDRMKDGAMVCNAGHFDIEIDLVALQERAVSR QTVRPFVEEYRLQSGKSVVVLGEGRLINLAAAEGHPASVMDMSFANQALACEYLVKNRGRLAPGLHPIPLEVDEAIARLK LKAMGIQIDSLTPEQIEYGNTWTAGT
Sequences:
>Translated_426_residues MTSATLSLPKHEVKDLNLAPLGKQRIQWAAREMPVLAQIRERFAQEKPFAGLRLVACCHITTETANLALALQAGGADSVL IASNPLSTQDDVAASLVADHGISVFALKGEDVATYRRHVQIALDHRPNLIIDDGGDVTAELVQHRQEQLSELIGTTEETT TGLVRLRAMLKAGVLSFPVMTVNDAETKHLFDNRYGTGQSTLDGILRCTNILLAGKTVVVAGYGWCAKGVAMRARGMGSQ VIVTEVNPVRALEAVMDGFRVMPMEEAAALGDIFITVTGNKHVIRGEHFDRMKDGAMVCNAGHFDIEIDLVALQERAVSR QTVRPFVEEYRLQSGKSVVVLGEGRLINLAAAEGHPASVMDMSFANQALACEYLVKNRGRLAPGLHPIPLEVDEAIARLK LKAMGIQIDSLTPEQIEYGNTWTAGT >Mature_425_residues TSATLSLPKHEVKDLNLAPLGKQRIQWAAREMPVLAQIRERFAQEKPFAGLRLVACCHITTETANLALALQAGGADSVLI ASNPLSTQDDVAASLVADHGISVFALKGEDVATYRRHVQIALDHRPNLIIDDGGDVTAELVQHRQEQLSELIGTTEETTT GLVRLRAMLKAGVLSFPVMTVNDAETKHLFDNRYGTGQSTLDGILRCTNILLAGKTVVVAGYGWCAKGVAMRARGMGSQV IVTEVNPVRALEAVMDGFRVMPMEEAAALGDIFITVTGNKHVIRGEHFDRMKDGAMVCNAGHFDIEIDLVALQERAVSRQ TVRPFVEEYRLQSGKSVVVLGEGRLINLAAAEGHPASVMDMSFANQALACEYLVKNRGRLAPGLHPIPLEVDEAIARLKL KAMGIQIDSLTPEQIEYGNTWTAGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=415, Percent_Identity=42.6506024096386, Blast_Score=332, Evalue=3e-91, Organism=Homo sapiens, GI239937451, Length=389, Percent_Identity=43.1876606683805, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI298286489, Length=410, Percent_Identity=40.4878048780488, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI195539349, Length=410, Percent_Identity=40.4878048780488, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI195539337, Length=410, Percent_Identity=40.4878048780488, Blast_Score=292, Evalue=5e-79, Organism=Homo sapiens, GI24308043, Length=410, Percent_Identity=40.4878048780488, Blast_Score=291, Evalue=5e-79, Organism=Homo sapiens, GI21361647, Length=410, Percent_Identity=39.0243902439024, Blast_Score=268, Evalue=9e-72, Organism=Caenorhabditis elegans, GI17506425, Length=419, Percent_Identity=41.7661097852029, Blast_Score=323, Evalue=9e-89, Organism=Saccharomyces cerevisiae, GI6320882, Length=427, Percent_Identity=41.6861826697892, Blast_Score=324, Evalue=1e-89, Organism=Drosophila melanogaster, GI24642172, Length=417, Percent_Identity=42.6858513189448, Blast_Score=325, Evalue=3e-89, Organism=Drosophila melanogaster, GI24656245, Length=402, Percent_Identity=38.3084577114428, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI45553385, Length=409, Percent_Identity=37.1638141809291, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI45553387, Length=409, Percent_Identity=37.1638141809291, Blast_Score=253, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 46147; Mature: 46016
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00738 ADOHCYASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSATLSLPKHEVKDLNLAPLGKQRIQWAAREMPVLAQIRERFAQEKPFAGLRLVACCHI CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEE TTETANLALALQAGGADSVLIASNPLSTQDDVAASLVADHGISVFALKGEDVATYRRHVQ EECCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHEEEEE IALDHRPNLIIDDGGDVTAELVQHRQEQLSELIGTTEETTTGLVRLRAMLKAGVLSFPVM EEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHCCEE TVNDAETKHLFDNRYGTGQSTLDGILRCTNILLAGKTVVVAGYGWCAKGVAMRARGMGSQ EECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCEEEEEECCHHHHHHHHHHCCCCCE VIVTEVNPVRALEAVMDGFRVMPMEEAAALGDIFITVTGNKHVIRGEHFDRMKDGAMVCN EEEEECCHHHHHHHHHCCCEECCHHHHHCCCEEEEEEECCEEEECCCHHHHCCCCCEEEE AGHFDIEIDLVALQERAVSRQTVRPFVEEYRLQSGKSVVVLGEGRLINLAAAEGHPASVM CCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCEE DMSFANQALACEYLVKNRGRLAPGLHPIPLEVDEAIARLKLKAMGIQIDSLTPEQIEYGN EHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCHHHHHCCC TWTAGT EECCCC >Mature Secondary Structure TSATLSLPKHEVKDLNLAPLGKQRIQWAAREMPVLAQIRERFAQEKPFAGLRLVACCHI CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEE TTETANLALALQAGGADSVLIASNPLSTQDDVAASLVADHGISVFALKGEDVATYRRHVQ EECCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHEEEEE IALDHRPNLIIDDGGDVTAELVQHRQEQLSELIGTTEETTTGLVRLRAMLKAGVLSFPVM EEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHCCEE TVNDAETKHLFDNRYGTGQSTLDGILRCTNILLAGKTVVVAGYGWCAKGVAMRARGMGSQ EECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCEEEEEECCHHHHHHHHHHCCCCCE VIVTEVNPVRALEAVMDGFRVMPMEEAAALGDIFITVTGNKHVIRGEHFDRMKDGAMVCN EEEEECCHHHHHHHHHCCCEECCHHHHHCCCEEEEEEECCEEEECCCHHHHCCCCCEEEE AGHFDIEIDLVALQERAVSRQTVRPFVEEYRLQSGKSVVVLGEGRLINLAAAEGHPASVM CCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCEE DMSFANQALACEYLVKNRGRLAPGLHPIPLEVDEAIARLKLKAMGIQIDSLTPEQIEYGN EHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCHHHHHCCC TWTAGT EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]