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The map label for this gene is pdtaR [H]

Identifier: 86609114

GI number: 86609114

Start: 1733374

End: 1734384

Strand: Direct

Name: pdtaR [H]

Synonym: CYB_1654

Alternate gene names: 86609114

Gene position: 1733374-1734384 (Clockwise)

Preceding gene: 86609113

Following gene: 86609116

Centisome position: 56.89

GC content: 57.67

Gene sequence:

>1011_bases
TTGAAGAGAGTTCCACCCCTTGTCAAAGGCAGTATCCTGGTCGTCGAAGACGAGAAGATCATCGCCAAGGACATTGCCAA
CGTTCTGAAAAAATTCGGCTACGCTGTGCCCGCCATTGCTTCTTCCGGGGAAGAAGCGATCCGAAGGCTGGAAGAGATGC
CGGTGGACTTGGTCTTGATGGATATCGTCCTAAAAGGCGATATCGATGGCATAGAAGCCGCCAAGCGGATCACCGAGCGC
TTCAACATTCCGGTGGTGCATCTGACGGCCTACGCCGATGAGGACACGCTCTCCCGCGTCAAGGAGACCCGGCCCTTCGG
CTACATCATCAAGCCTTTCAAAGAGCGGGAACTCTACACCACCATTGAAATTGCCCTGCACAACCACCGCCAGAGCCTTG
AGAACCGCAAGCTGGAAGAGAAAAGAATCGAGGAGCTGCGGCAAAAACTGCAGCAGTTGCAGCAGTTCACGGACGTGAAG
GGCACTCTGTTCAAGAAATTCTTGCAGGATCTGAGCGAGCCCCTCTCGAACCTCAGCTTTGCCTTGGGTCTGCTCAAGGA
TGCCGAGTCGGAGCAGAAGCGGGAGCACTATCTGCAGGTGCTGGAGGATGAGTTTCGCCGTGAGCTGGAGCTGATCCACC
AAACCTCTAACCTGGAAAATCTTTTAAACCTGGAAAATGTTGGCCTGTTGAGCCAGTTCAGCCTGCTGCGTCCCCAGGAG
CCCAGCCGTAGTCACCGGTTGGAGCAGGAAGCACCCACCCCTGCAACCACGCCCTCCCAGGAGTCGGCAGGCTCTGCCCC
CGCACCCAGCCCCACTGCCGCCACAGCGCCACGGGCACCGCTGCGCCCCCTCAACCAGACTCAGTTGGCGGAACGGTTGG
GGGTGGTGGTTTCCGCCATTACCTATTGGAAATTCAAAACCGGGTTTCCGGAGTGGAGCCGCAGCCGGGATCCCGAGGGC
ATTTCTTGGCGCTATTCCCCCGATTCCAAGCGCTTTTCACCCGTGCCCTAG

Upstream 100 bases:

>100_bases
TACAACTGGTTGCAACCCTCACCGATCAGCTACAGGGCAAGATACAATTGAGAAGCAAACCGGGTACCACCTTCATCATT
ACCTTTCCGAGGAGCGAGCC

Downstream 100 bases:

>100_bases
CTAGCGTTGCACCACTTCCACCCGCACAGGCGCCAGCCCTGAGCGCACCATCCCCAACACCTCTGCCGCTCGCAGGGAGA
GGTCGATGATCCGACCGGGG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKRVPPLVKGSILVVEDEKIIAKDIANVLKKFGYAVPAIASSGEEAIRRLEEMPVDLVLMDIVLKGDIDGIEAAKRITER
FNIPVVHLTAYADEDTLSRVKETRPFGYIIKPFKERELYTTIEIALHNHRQSLENRKLEEKRIEELRQKLQQLQQFTDVK
GTLFKKFLQDLSEPLSNLSFALGLLKDAESEQKREHYLQVLEDEFRRELELIHQTSNLENLLNLENVGLLSQFSLLRPQE
PSRSHRLEQEAPTPATTPSQESAGSAPAPSPTAATAPRAPLRPLNQTQLAERLGVVVSAITYWKFKTGFPEWSRSRDPEG
ISWRYSPDSKRFSPVP

Sequences:

>Translated_336_residues
MKRVPPLVKGSILVVEDEKIIAKDIANVLKKFGYAVPAIASSGEEAIRRLEEMPVDLVLMDIVLKGDIDGIEAAKRITER
FNIPVVHLTAYADEDTLSRVKETRPFGYIIKPFKERELYTTIEIALHNHRQSLENRKLEEKRIEELRQKLQQLQQFTDVK
GTLFKKFLQDLSEPLSNLSFALGLLKDAESEQKREHYLQVLEDEFRRELELIHQTSNLENLLNLENVGLLSQFSLLRPQE
PSRSHRLEQEAPTPATTPSQESAGSAPAPSPTAATAPRAPLRPLNQTQLAERLGVVVSAITYWKFKTGFPEWSRSRDPEG
ISWRYSPDSKRFSPVP
>Mature_336_residues
MKRVPPLVKGSILVVEDEKIIAKDIANVLKKFGYAVPAIASSGEEAIRRLEEMPVDLVLMDIVLKGDIDGIEAAKRITER
FNIPVVHLTAYADEDTLSRVKETRPFGYIIKPFKERELYTTIEIALHNHRQSLENRKLEEKRIEELRQKLQQLQQFTDVK
GTLFKKFLQDLSEPLSNLSFALGLLKDAESEQKREHYLQVLEDEFRRELELIHQTSNLENLLNLENVGLLSQFSLLRPQE
PSRSHRLEQEAPTPATTPSQESAGSAPAPSPTAATAPRAPLRPLNQTQLAERLGVVVSAITYWKFKTGFPEWSRSRDPEG
ISWRYSPDSKRFSPVP

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=121, Percent_Identity=37.1900826446281, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 38242; Mature: 38242

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVPPLVKGSILVVEDEKIIAKDIANVLKKFGYAVPAIASSGEEAIRRLEEMPVDLVLM
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHH
DIVLKGDIDGIEAAKRITERFNIPVVHLTAYADEDTLSRVKETRPFGYIIKPFKERELYT
HHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCEECCHHHHHHHH
TIEIALHNHRQSLENRKLEEKRIEELRQKLQQLQQFTDVKGTLFKKFLQDLSEPLSNLSF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGLLKDAESEQKREHYLQVLEDEFRRELELIHQTSNLENLLNLENVGLLSQFSLLRPQE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PSRSHRLEQEAPTPATTPSQESAGSAPAPSPTAATAPRAPLRPLNQTQLAERLGVVVSAI
CCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TYWKFKTGFPEWSRSRDPEGISWRYSPDSKRFSPVP
HHHHHCCCCCCHHCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MKRVPPLVKGSILVVEDEKIIAKDIANVLKKFGYAVPAIASSGEEAIRRLEEMPVDLVLM
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHH
DIVLKGDIDGIEAAKRITERFNIPVVHLTAYADEDTLSRVKETRPFGYIIKPFKERELYT
HHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCEECCHHHHHHHH
TIEIALHNHRQSLENRKLEEKRIEELRQKLQQLQQFTDVKGTLFKKFLQDLSEPLSNLSF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGLLKDAESEQKREHYLQVLEDEFRRELELIHQTSNLENLLNLENVGLLSQFSLLRPQE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PSRSHRLEQEAPTPATTPSQESAGSAPAPSPTAATAPRAPLRPLNQTQLAERLGVVVSAI
CCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TYWKFKTGFPEWSRSRDPEGISWRYSPDSKRFSPVP
HHHHHCCCCCCHHCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]