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The map label for this gene is hflB [C]

Identifier: 86609003

GI number: 86609003

Start: 1613937

End: 1615136

Strand: Direct

Name: hflB [C]

Synonym: CYB_1538

Alternate gene names: 86609003

Gene position: 1613937-1615136 (Clockwise)

Preceding gene: 86609002

Following gene: 86609006

Centisome position: 52.97

GC content: 54.5

Gene sequence:

>1200_bases
ATGGATAACGGTTACGACGACTATTACCCCAGCTACCGGCAGACCAACAGCTACAATCTCCTGCAATCCGGGTGGAGACC
TCTGCTCCGCCATTTCGATGTCGAGTATTTCTGGCAACTGGCCATGCAGGATCCCTGGGAATTGGCCGAGAAAATTCTGG
ATGTGTGCAGCGATATCGCCAACGCAGTGGGACGCAACGAATATAGCCCGCTGGCCAATTTGCTTAACCTGTTTTCAGAG
AACACCCGTTACGAGATCGAGGAATTCTGGAACAGCATTACCCCACCCCCACCCGGCCCCGACTGCACCTTTCGAAGCTA
TCTTTCGACGGAAACTCCGCTGCGGCAGCAGGTGAGCCGCGACCAGATTCCCATTCATTACATCTTGAATTGTCTGCAAG
AAGTTATCGTTCTCAAAATCTTGGCGCATCTGGGGCGACCGGCACAGATCGTGCAAGTGTACATGGATCGCTACTTCTAC
TACCCGGTTGAGCATTTCAACGGCTGGGATCAAATCAGTAGTCCGGGCACCGTCTATGCCTTTTGGCCGGAGCATCAGAT
TTGGCTGCAAATCCAGACCACCTATCAAACCCGCCGTCGCTACACCCTGATTGGGGTAGATCTCAAGCCCTTGATCCGCA
AGGTTACCTACAACCTGGCGGTGATGGTGAGCGGCTACCAAAGCCGAATTGGGCAAATCCAGAGCCCACATCCAATCAGT
TCTTTTCCCGCCGAGATTCAAGCCTTCACCGATCAGGTTCAACAGCGAATTCTGCAGCAGGAGCGATTGGCGGTCTTGGT
ACACGGGATCCCAGGTACCGGTAAAACTGCCTGGACGCAAGCGGTGGCCCACGAGCTGCTGGTACCACTGGGCTATGTGG
TGTTCATCTTGGATCATGAAGCCGTGCAAGAGTTTATTGCGCCTTCCTATCTGGAGCGGGTGTGCCTGATCATCAATGAG
GCAGATAACCTCGCCCAAGACCGCGCCAGCGAGGTGGCCCAACGGAGCACCAAAACTGAGCGCATCCTCAGCCTGCTGGA
TGGCACCCTCCACCAAAGCGTGCTCGACGCAGAATACGCCGACTGTGAACAAAGGCTGGTGGTGCTGATGACTTGCAACA
CGACTGAACGTTTGGATCCGGCAGTTTTGCGCAAAGGGCGTGTGGACTTGGTGCAGGAGTTTACCTACCGCTTTGTTTGA

Upstream 100 bases:

>100_bases
AGACCCCAGTGCCGGGCCGCCATAGTTTCGCTCTCGTGGGAGAGGCATCCACGCCCCAGCAAGCCCACCGATTCCCCCTT
TTCCTAGCCCCTAACCCTGC

Downstream 100 bases:

>100_bases
GCTGGATCGGCATCCACCTGCTCTCTGAACATGGGACAAGAGCCACCGAGGCTGTTCTTCAATTAGTTCCCTAGGACTAG
GTAGCCCGTAGCTGCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MDNGYDDYYPSYRQTNSYNLLQSGWRPLLRHFDVEYFWQLAMQDPWELAEKILDVCSDIANAVGRNEYSPLANLLNLFSE
NTRYEIEEFWNSITPPPPGPDCTFRSYLSTETPLRQQVSRDQIPIHYILNCLQEVIVLKILAHLGRPAQIVQVYMDRYFY
YPVEHFNGWDQISSPGTVYAFWPEHQIWLQIQTTYQTRRRYTLIGVDLKPLIRKVTYNLAVMVSGYQSRIGQIQSPHPIS
SFPAEIQAFTDQVQQRILQQERLAVLVHGIPGTGKTAWTQAVAHELLVPLGYVVFILDHEAVQEFIAPSYLERVCLIINE
ADNLAQDRASEVAQRSTKTERILSLLDGTLHQSVLDAEYADCEQRLVVLMTCNTTERLDPAVLRKGRVDLVQEFTYRFV

Sequences:

>Translated_399_residues
MDNGYDDYYPSYRQTNSYNLLQSGWRPLLRHFDVEYFWQLAMQDPWELAEKILDVCSDIANAVGRNEYSPLANLLNLFSE
NTRYEIEEFWNSITPPPPGPDCTFRSYLSTETPLRQQVSRDQIPIHYILNCLQEVIVLKILAHLGRPAQIVQVYMDRYFY
YPVEHFNGWDQISSPGTVYAFWPEHQIWLQIQTTYQTRRRYTLIGVDLKPLIRKVTYNLAVMVSGYQSRIGQIQSPHPIS
SFPAEIQAFTDQVQQRILQQERLAVLVHGIPGTGKTAWTQAVAHELLVPLGYVVFILDHEAVQEFIAPSYLERVCLIINE
ADNLAQDRASEVAQRSTKTERILSLLDGTLHQSVLDAEYADCEQRLVVLMTCNTTERLDPAVLRKGRVDLVQEFTYRFV
>Mature_399_residues
MDNGYDDYYPSYRQTNSYNLLQSGWRPLLRHFDVEYFWQLAMQDPWELAEKILDVCSDIANAVGRNEYSPLANLLNLFSE
NTRYEIEEFWNSITPPPPGPDCTFRSYLSTETPLRQQVSRDQIPIHYILNCLQEVIVLKILAHLGRPAQIVQVYMDRYFY
YPVEHFNGWDQISSPGTVYAFWPEHQIWLQIQTTYQTRRRYTLIGVDLKPLIRKVTYNLAVMVSGYQSRIGQIQSPHPIS
SFPAEIQAFTDQVQQRILQQERLAVLVHGIPGTGKTAWTQAVAHELLVPLGYVVFILDHEAVQEFIAPSYLERVCLIINE
ADNLAQDRASEVAQRSTKTERILSLLDGTLHQSVLDAEYADCEQRLVVLMTCNTTERLDPAVLRKGRVDLVQEFTYRFV

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0465

COG function: function code O; ATP-dependent Zn proteases

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46229; Mature: 46229

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGYDDYYPSYRQTNSYNLLQSGWRPLLRHFDVEYFWQLAMQDPWELAEKILDVCSDIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
NAVGRNEYSPLANLLNLFSENTRYEIEEFWNSITPPPPGPDCTFRSYLSTETPLRQQVSR
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHCC
DQIPIHYILNCLQEVIVLKILAHLGRPAQIVQVYMDRYFYYPVEHFNGWDQISSPGTVYA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCEEEE
FWPEHQIWLQIQTTYQTRRRYTLIGVDLKPLIRKVTYNLAVMVSGYQSRIGQIQSPHPIS
ECCCCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHHHHHHHEEECHHHHHCCCCCCCCCC
SFPAEIQAFTDQVQQRILQQERLAVLVHGIPGTGKTAWTQAVAHELLVPLGYVVFILDHE
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHH
AVQEFIAPSYLERVCLIINEADNLAQDRASEVAQRSTKTERILSLLDGTLHQSVLDAEYA
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DCEQRLVVLMTCNTTERLDPAVLRKGRVDLVQEFTYRFV
CHHCCEEEEEECCCHHHCCHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDNGYDDYYPSYRQTNSYNLLQSGWRPLLRHFDVEYFWQLAMQDPWELAEKILDVCSDIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
NAVGRNEYSPLANLLNLFSENTRYEIEEFWNSITPPPPGPDCTFRSYLSTETPLRQQVSR
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHCC
DQIPIHYILNCLQEVIVLKILAHLGRPAQIVQVYMDRYFYYPVEHFNGWDQISSPGTVYA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCEEEE
FWPEHQIWLQIQTTYQTRRRYTLIGVDLKPLIRKVTYNLAVMVSGYQSRIGQIQSPHPIS
ECCCCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHHHHHHHEEECHHHHHCCCCCCCCCC
SFPAEIQAFTDQVQQRILQQERLAVLVHGIPGTGKTAWTQAVAHELLVPLGYVVFILDHE
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHH
AVQEFIAPSYLERVCLIINEADNLAQDRASEVAQRSTKTERILSLLDGTLHQSVLDAEYA
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DCEQRLVVLMTCNTTERLDPAVLRKGRVDLVQEFTYRFV
CHHCCEEEEEECCCHHHCCHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA