Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608974

Identifier: 86608974

GI number: 86608974

Start: 1580056

End: 1580415

Strand: Reverse

Name: 86608974

Synonym: CYB_1507

Alternate gene names: NA

Gene position: 1580415-1580056 (Counterclockwise)

Preceding gene: 86608982

Following gene: 86608973

Centisome position: 51.87

GC content: 53.61

Gene sequence:

>360_bases
ATGGACAAGCATCTGCAAGAGTTGCTCCAGCAAGAAGATCAAAAGCGCAGAGATGAAGAGGTGCGGCGCACCTATGCCCT
TTCTCAAAAGTCCGAGGGGATGGTGATCCTTCTGTCTATTCTGCTTGCCTTCGGAGCCTACCTCTACACGCGGCGGTGGA
AAGCTTTGATGGTTTTTCTGGGCTGGTGTTTCTTCCTTGGCGTGTTGTTTAGCGACGACGAGGGAGAGGTTTCCCTACCC
GGACTGTTTCTGGCCTCCACCTGGGCAGCGGTAGACAATTGCAGCGCTATCCAGCGGGCAAGAGAAGAAATTGAACGGCT
GCGCTCCGGCCAAAACCCTGATGTTGATCGGCAAACTTAA

Upstream 100 bases:

>100_bases
CTCGCCTCTCTTCTTCTGCGGTGGGATCCCGAAAAGTTGTTTTGAACAAGGGTCTTCCCAGGATTTTTAAGATAAGGCCG
TCCGATTTTGAGGCGGCCTT

Downstream 100 bases:

>100_bases
ACTTGGTCGACAAAACAAAATAGTGGCCCAAAAATCGGTATTTTATTTCAAACTCTCGAAAAAGATGCTATACCTACTAT
TTCAAGTGGCACCCAGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDKHLQELLQQEDQKRRDEEVRRTYALSQKSEGMVILLSILLAFGAYLYTRRWKALMVFLGWCFFLGVLFSDDEGEVSLP
GLFLASTWAAVDNCSAIQRAREEIERLRSGQNPDVDRQT

Sequences:

>Translated_119_residues
MDKHLQELLQQEDQKRRDEEVRRTYALSQKSEGMVILLSILLAFGAYLYTRRWKALMVFLGWCFFLGVLFSDDEGEVSLP
GLFLASTWAAVDNCSAIQRAREEIERLRSGQNPDVDRQT
>Mature_119_residues
MDKHLQELLQQEDQKRRDEEVRRTYALSQKSEGMVILLSILLAFGAYLYTRRWKALMVFLGWCFFLGVLFSDDEGEVSLP
GLFLASTWAAVDNCSAIQRAREEIERLRSGQNPDVDRQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13787; Mature: 13787

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKHLQELLQQEDQKRRDEEVRRTYALSQKSEGMVILLSILLAFGAYLYTRRWKALMVFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWCFFLGVLFSDDEGEVSLPGLFLASTWAAVDNCSAIQRAREEIERLRSGQNPDVDRQT
HHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDKHLQELLQQEDQKRRDEEVRRTYALSQKSEGMVILLSILLAFGAYLYTRRWKALMVFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWCFFLGVLFSDDEGEVSLPGLFLASTWAAVDNCSAIQRAREEIERLRSGQNPDVDRQT
HHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA