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The map label for this gene is psbJ

Identifier: 86608965

GI number: 86608965

Start: 1573359

End: 1573478

Strand: Direct

Name: psbJ

Synonym: CYB_1498

Alternate gene names: 86608965

Gene position: 1573359-1573478 (Clockwise)

Preceding gene: 86608964

Following gene: 86608966

Centisome position: 51.64

GC content: 52.5

Gene sequence:

>120_bases
ATGACCAGTCAAGCAAGGATCCCTTTGTGGATAGTGGCTGTGGTTGCCGGTTTGGGTGTGATCACGGTAGTTGGGCTTTT
CTTCTATGGCTCCTATGTGGGCTTGGGCTCGAGCCTGTAA

Upstream 100 bases:

>100_bases
AGGGGGCAATGCTGGCTTTTGGCTAGCCCTTGCTCCCCTTTGCTAAGTTTACTGAGGATGTAATTGCTGCTAGTTCTGTC
TTTTTTGGAGACCAGTTGCT

Downstream 100 bases:

>100_bases
GTTTGAGGTTTTTAGTCTGTTAGTCTGGTAGTAGCCCGCAATAGGTAGGGGTACAAAGCCGCATGGTTTTTATGGCCTAG
CTGAATTCAGTTAGGCCTTT

Product: photosystem II reaction center protein J

Products: NA

Alternate protein names: PSII-J

Number of amino acids: Translated: 39; Mature: 38

Protein sequence:

>39_residues
MTSQARIPLWIVAVVAGLGVITVVGLFFYGSYVGLGSSL

Sequences:

>Translated_39_residues
MTSQARIPLWIVAVVAGLGVITVVGLFFYGSYVGLGSSL
>Mature_38_residues
TSQARIPLWIVAVVAGLGVITVVGLFFYGSYVGLGSSL

Specific function: This protein is a component of the reaction center of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBJ_SYNJB (Q2JLE7)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_477727.1
- ProteinModelPortal:   Q2JLE7
- SMR:   Q2JLE7
- STRING:   Q2JLE7
- GeneID:   3901497
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_1498
- TIGR:   CYB_1498
- eggNOG:   NOG39942
- HOGENOM:   HBG747967
- ProtClustDB:   PRK02565
- BioCyc:   SSP321332:CYB_1498-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_01305
- InterPro:   IPR002682

Pfam domain/function: PF01788 PsbJ

EC number: NA

Molecular weight: Translated: 4043; Mature: 3912

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x140f1cc8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQARIPLWIVAVVAGLGVITVVGLFFYGSYVGLGSSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure 
TSQARIPLWIVAVVAGLGVITVVGLFFYGSYVGLGSSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA