Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608941

Identifier: 86608941

GI number: 86608941

Start: 1550153

End: 1550629

Strand: Reverse

Name: 86608941

Synonym: CYB_1474

Alternate gene names: NA

Gene position: 1550629-1550153 (Counterclockwise)

Preceding gene: 86608942

Following gene: 86608940

Centisome position: 50.9

GC content: 52.41

Gene sequence:

>477_bases
ATGCGGTTTCTCAAGTGGCTGTTGCACAATCCCCACGAGACAGAAGAGGAGGATCCCTTTTTGCGGGCCATCACCCGCCT
GGAAAGCCTGATCTCGAAGCTGCTTTCAATTTTGATGATCGGGCTAATCGTAGTAGCAGTGGTGGACTTGGCCCGGTTCT
TGGTGGCAGATTTGTTGATGGAGCCAACTGGGTTTTTCTCCACCACTTTGATCGAGATCTTCGGCCTCTTTTTAAATATT
CTGATTGCGCTGGAAATTCTGGAGAACATTACCGCCTACTTGCAAAAGCAGGTGGTGCAGGTGGAGCTGGTGATCGTCAC
CTCTTTGATTGCGGTGGCCCGCAAGATCATCATTTTTGATTTCGAGAAGCTGGGGGGGTTGGAGCTCATTGGCTTGGGGG
CAGCGACGTTGGCCCTCTCGGTGAGTTATTGGCTGGTGCGGCGAGCCAAGCCTCCATCCAAGTCCGGGGAAAATTAG

Upstream 100 bases:

>100_bases
CGCCCCAAGGGATCCCTGCCTGCTTCCCGGCAAGACGGTTGGGACGGATAATGTTGTCTCAGGATCAGGACATAAGGGTT
TGGATCTGTCGGGGTTGGCG

Downstream 100 bases:

>100_bases
GCTAGGACAGAATCCTGGTACGATGGGGATGGAGCTTTCCTGCAAGAATTGTGCGTGCGCGATCTAAGTTGGCCAGCCTG
GTGAAGTTAGCTGTGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRFLKWLLHNPHETEEEDPFLRAITRLESLISKLLSILMIGLIVVAVVDLARFLVADLLMEPTGFFSTTLIEIFGLFLNI
LIALEILENITAYLQKQVVQVELVIVTSLIAVARKIIIFDFEKLGGLELIGLGAATLALSVSYWLVRRAKPPSKSGEN

Sequences:

>Translated_158_residues
MRFLKWLLHNPHETEEEDPFLRAITRLESLISKLLSILMIGLIVVAVVDLARFLVADLLMEPTGFFSTTLIEIFGLFLNI
LIALEILENITAYLQKQVVQVELVIVTSLIAVARKIIIFDFEKLGGLELIGLGAATLALSVSYWLVRRAKPPSKSGEN
>Mature_158_residues
MRFLKWLLHNPHETEEEDPFLRAITRLESLISKLLSILMIGLIVVAVVDLARFLVADLLMEPTGFFSTTLIEIFGLFLNI
LIALEILENITAYLQKQVVQVELVIVTSLIAVARKIIIFDFEKLGGLELIGLGAATLALSVSYWLVRRAKPPSKSGEN

Specific function: Unknown

COG id: COG3431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17674; Mature: 17674

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLKWLLHNPHETEEEDPFLRAITRLESLISKLLSILMIGLIVVAVVDLARFLVADLLM
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPTGFFSTTLIEIFGLFLNILIALEILENITAYLQKQVVQVELVIVTSLIAVARKIIIFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEKLGGLELIGLGAATLALSVSYWLVRRAKPPSKSGEN
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRFLKWLLHNPHETEEEDPFLRAITRLESLISKLLSILMIGLIVVAVVDLARFLVADLLM
CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPTGFFSTTLIEIFGLFLNILIALEILENITAYLQKQVVQVELVIVTSLIAVARKIIIFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEKLGGLELIGLGAATLALSVSYWLVRRAKPPSKSGEN
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA