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The map label for this gene is ydgJ [C]

Identifier: 86608899

GI number: 86608899

Start: 1501791

End: 1502765

Strand: Reverse

Name: ydgJ [C]

Synonym: CYB_1431

Alternate gene names: 86608899

Gene position: 1502765-1501791 (Counterclockwise)

Preceding gene: 86608900

Following gene: 86608898

Centisome position: 49.32

GC content: 62.46

Gene sequence:

>975_bases
TTGCGGGTGGGGATCATCGGCACCGGCTACGCAGCTCGCTCACGGGCCGAGGCCTTGCGCAAAGATGGGCAAGTGCAGAT
TGTCGCTGTTGCCGGTCGAGCTCCCGACCGGAGCGATGCTTTTGCCGCCGAGTTGGGGGCCGTCGCCTATTCGGACTGGT
CTTCTCTGTTGGGCGAGCAGCGGCTGGATCTGGTTTTTGTCAGCACCATCAATCGGGATCATGCCGCCATTGCCCGTGCT
GCTCTGGAGGCAGGGATCCACACCGTCGTGGAATATCCCCTCGCCCTCAGCGCTGCCGAAGCGCGTTCCTTGGTGCAATT
GGCAGCCGAGCGGCAAGTGCTGCTGCACGTCGAACACATCGAGCTAATTAGCGGCGTTCACCGGTTGCTGAAACAAGAGC
TGGAAGGGTTGGGCAAGCTGTTTGCCGTTCGCTACATCACTCTCACCGCCACCCACCCCGCCCCCGATCGCTGGACCTAT
CGGCCTGAGTTGTTTGGCTTCCCCCTCATGGGGGCCGTTTCTCGCATCCACCGCTTGGTGGACTTGTTGGGCAGGGTAGA
ACGGGTGAGCTGCCAACTGCGCTACGACGGGCCGGATCTGCCCCACCGCTACAGCAGTTGCTACTGCACAGCCCAGCTGA
GTTTTGCCAGTGGGTTGCTGGCGGTGTTGACCTATGGCAAGGGGGATTCCCTGTGGTGCTCGCAGCGGCTACTGGAGTTC
CACGGTCAACGGGGGGGCCTATTGATCAACGGCGAAGAGGCAACGTTGCTGCGGCCCGGCAGCGCCCACCCTCTAGAGAC
GGGATCCCGCCACGGCCTGTTCGAGCAAGACACCCGCATGGTGCTGGATCACCTGCGCCACGGCAGACCCCTCTATATCC
ATACTGAAAACATGCTCCACGCCCTGGCGGTGGCCGAGGCAGCCGAGCGATCTGCCCAAACCCAGCAGGTGGTTTGCGTT
CAGGATTGGCCCTAA

Upstream 100 bases:

>100_bases
GGCAAACCTAGGCGGAGCGAGATCCGGATTGCCGGGTGGTACAAAGGATCCCTCCTGTGTGATGCTACAGACAGAGGCAG
GCTAGGGGAGGGAACAAACC

Downstream 100 bases:

>100_bases
GGGAAGTCCCTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCGATAGCATTCTGTTTGTTTC
CATTCGCGTTAGCGGGACGG

Product: oxidoreductase, NAD-binding

Products: biliverdin; NADH; NADPH; H+

Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase Domain Protein; Oxidoreductase Biliverdin Reductase; Homoserine Dehydrogenase; Oxidoreductase-Like

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRVGIIGTGYAARSRAEALRKDGQVQIVAVAGRAPDRSDAFAAELGAVAYSDWSSLLGEQRLDLVFVSTINRDHAAIARA
ALEAGIHTVVEYPLALSAAEARSLVQLAAERQVLLHVEHIELISGVHRLLKQELEGLGKLFAVRYITLTATHPAPDRWTY
RPELFGFPLMGAVSRIHRLVDLLGRVERVSCQLRYDGPDLPHRYSSCYCTAQLSFASGLLAVLTYGKGDSLWCSQRLLEF
HGQRGGLLINGEEATLLRPGSAHPLETGSRHGLFEQDTRMVLDHLRHGRPLYIHTENMLHALAVAEAAERSAQTQQVVCV
QDWP

Sequences:

>Translated_324_residues
MRVGIIGTGYAARSRAEALRKDGQVQIVAVAGRAPDRSDAFAAELGAVAYSDWSSLLGEQRLDLVFVSTINRDHAAIARA
ALEAGIHTVVEYPLALSAAEARSLVQLAAERQVLLHVEHIELISGVHRLLKQELEGLGKLFAVRYITLTATHPAPDRWTY
RPELFGFPLMGAVSRIHRLVDLLGRVERVSCQLRYDGPDLPHRYSSCYCTAQLSFASGLLAVLTYGKGDSLWCSQRLLEF
HGQRGGLLINGEEATLLRPGSAHPLETGSRHGLFEQDTRMVLDHLRHGRPLYIHTENMLHALAVAEAAERSAQTQQVVCV
QDWP
>Mature_324_residues
MRVGIIGTGYAARSRAEALRKDGQVQIVAVAGRAPDRSDAFAAELGAVAYSDWSSLLGEQRLDLVFVSTINRDHAAIARA
ALEAGIHTVVEYPLALSAAEARSLVQLAAERQVLLHVEHIELISGVHRLLKQELEGLGKLFAVRYITLTATHPAPDRWTY
RPELFGFPLMGAVSRIHRLVDLLGRVERVSCQLRYDGPDLPHRYSSCYCTAQLSFASGLLAVLTYGKGDSLWCSQRLLEF
HGQRGGLLINGEEATLLRPGSAHPLETGSRHGLFEQDTRMVLDHLRHGRPLYIHTENMLHALAVAEAAERSAQTQQVVCV
QDWP

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33589854, Length=292, Percent_Identity=26.7123287671233, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.1.24

Molecular weight: Translated: 35706; Mature: 35706

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGIIGTGYAARSRAEALRKDGQVQIVAVAGRAPDRSDAFAAELGAVAYSDWSSLLGEQ
CEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
RLDLVFVSTINRDHAAIARAALEAGIHTVVEYPLALSAAEARSLVQLAAERQVLLHVEHI
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
ELISGVHRLLKQELEGLGKLFAVRYITLTATHPAPDRWTYRPELFGFPLMGAVSRIHRLV
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHH
DLLGRVERVSCQLRYDGPDLPHRYSSCYCTAQLSFASGLLAVLTYGKGDSLWCSQRLLEF
HHHCCHHEEEEEEEECCCCCCCHHCCEEEEEEHHHHHCHHHEEEECCCCCHHHHHHHHHH
HGQRGGLLINGEEATLLRPGSAHPLETGSRHGLFEQDTRMVLDHLRHGRPLYIHTENMLH
CCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHH
ALAVAEAAERSAQTQQVVCVQDWP
HHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MRVGIIGTGYAARSRAEALRKDGQVQIVAVAGRAPDRSDAFAAELGAVAYSDWSSLLGEQ
CEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
RLDLVFVSTINRDHAAIARAALEAGIHTVVEYPLALSAAEARSLVQLAAERQVLLHVEHI
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
ELISGVHRLLKQELEGLGKLFAVRYITLTATHPAPDRWTYRPELFGFPLMGAVSRIHRLV
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHH
DLLGRVERVSCQLRYDGPDLPHRYSSCYCTAQLSFASGLLAVLTYGKGDSLWCSQRLLEF
HHHCCHHEEEEEEEECCCCCCCHHCCEEEEEEHHHHHCHHHEEEECCCCCHHHHHHHHHH
HGQRGGLLINGEEATLLRPGSAHPLETGSRHGLFEQDTRMVLDHLRHGRPLYIHTENMLH
CCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHH
ALAVAEAAERSAQTQQVVCVQDWP
HHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: bilirubin; NAD+; NADP+

Specific reaction: bilirubin + NAD(P)+ = biliverdin + NAD(P)H + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA