| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is lnt [H]
Identifier: 86608882
GI number: 86608882
Start: 1482257
End: 1483867
Strand: Reverse
Name: lnt [H]
Synonym: CYB_1414
Alternate gene names: 86608882
Gene position: 1483867-1482257 (Counterclockwise)
Preceding gene: 86608884
Following gene: 86608880
Centisome position: 48.7
GC content: 61.02
Gene sequence:
>1611_bases ATGAAGCCGGAACTGAAATCTTCAACTCAACAGCAGGATCTGCCCCAAAAGAGAAATCCAGGCGAGGGATCCCGCTGGCT GATGGGTCTAGCCATCCTGCTGCTCTGTCTGGGATCCCCCAACCGCTGGCTGCACTGGTTTCCGGGAGCGCTGCTGGGCC TAGCCCTGCTGTTTGGCCTGTGCGAGCAACGGCAAGGGTGGGCGCGGTGGCGTTTGGCCTATGGCCTCTGGTTTTGGGTT TGCCTGTATGCCTTCTGGGTGGATCCCTTCTCGGTTGAGGTGTTGAGCGCCTGGGAGATCCTAGGGGGCGTGGTGGTGGC TCCCCTGATCCCCCTCTTTTTCACCACCGCTACGCTCCTCAGTTTGGAGCTGAGCCGCCCCCTGCCGGCTTGGGCACGTC CGCTGGGCTTGGCCACGGTCTGGACAGGCTTGGATGGGCTGTTGGGCTTGCTCTGGTGGCCCATCCCTTTCCACTGGGGA TCCCTGTTGTTCGACTGGCCCCTCGGGATCCAAGTAGCCGATGTTACGGGGATCTGGGGGGTTACCTTTTTTGCCGTGTT CGTCAATGGGGTTCTTTGGCAGATGGCCAGGCAGATTTCTAGCCGGTGGCAGGCGGCTGGGGGATCCCTGAGAAACGTTT TGGGTGAGATGCTCAGGAACAGGGATTTCTGGGGTACGCTCGCCTGCGGCCTGGGGTTGACGGGGCTGGTCTTGGCCTAT GGAAGCGCACGCCTGGCCTACTTCGATGCCTTGGCCGTCGAAAACAGGGATCCTGACTTTCGGGTGGCGGCGGTGCAGCA GGTGGCTTGGCTGGAAGCCGATCGCAGTTGGAACTACCGCCTGGAGCGCTACCGGGAGCTGCATCAGCTTTCTGCCCAGG GGGTGGCTGCTGGGGCACAGTTGGTGGTTTGGCCGGAGGGGGCGCTGCGGGCACGGCTGCTGAATACTGGCCTGGAACCC TACGTGATCGAGCCAATGCAAGCGATTCTGCCGCCGGAAGGCGCTTTGATTACGGGGGCAACAGAGCCGGATCCCCGCAC AGCCCATTTGCCGGAGCCAGAGCAGCGATTTTTTAACACGGCCCTGTTGTTTGACGCCCGGGGCAACTTGCTGGATGGGT TTGGCAAGCAGTGGATCTTTCCCTATTTCGAGTCGGGGCGCTACGTGCCTTCACCCGATGGCTATCGGCCTCTGGACGGA GGGGAGCTTTTCGGGCCTTTGGGGGTGATGATCTGCTTGGAGAGCGTCTTGCCTGCGCCCAGCCGAACTTTAACCCGTCG CGGCGCCGAGTCTTTGATCGTGATTTCGGATGATAGCTGGTTTGGTAATAGCCACTGGCCGATGTTGCATGGCCAGCTCT CGGTTTTCCGGGCTGTGGAAAATCGGCGGGGCGTGGTGTTTGTCAATAACACAGGCGGCAATCTGGTGGTGGATCCCTCA GGTCGGCTCCAGCAGGTTGGCCCCATCTTTCAGCGGGGGGTGATTACGGGAGAAGTGAAGCGGCGTTCTGAGACAACTTT CTACAATCGCGCGGGGGATTGGCTGGCGTGGCTGACGTTGGGGCTATCTTTGGGGCTATGGCGCTGGGGATCCCGAGCAA GGCAAGGATGA
Upstream 100 bases:
>100_bases GCTGCAAAACGCTACTCTGGAGAAGAGCTGTTGGCAAGGGCGTGTTCAATCCTAGGGCATTACGTGGGGTTTCCCGAATA GGCTGAACTTTATTGAGGTG
Downstream 100 bases:
>100_bases GTTAGAATCGATAGGCCCACCGGTGGGTCTGCGGATTCTCCTATCCAGTCCTCACTTCAAAGCCCTGCTGATGTAGCTCA GTTGGTAGAGCAGCTCACTC
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGLCEQRQGWARWRLAYGLWFWV CLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLLSLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWG SLLFDWPLGIQVADVTGIWGVTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQLVVWPEGALRARLLNTGLEP YVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNTALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDG GELFGPLGVMICLESVLPAPSRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG
Sequences:
>Translated_536_residues MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGLCEQRQGWARWRLAYGLWFWV CLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLLSLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWG SLLFDWPLGIQVADVTGIWGVTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQLVVWPEGALRARLLNTGLEP YVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNTALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDG GELFGPLGVMICLESVLPAPSRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG >Mature_536_residues MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGLCEQRQGWARWRLAYGLWFWV CLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLLSLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWG SLLFDWPLGIQVADVTGIWGVTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQLVVWPEGALRARLLNTGLEP YVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNTALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDG GELFGPLGVMICLESVLPAPSRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=285, Percent_Identity=24.9122807017544, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 59892; Mature: 59892
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGL CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHH CEQRQGWARWRLAYGLWFWVCLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWGSLLFDWPLGIQVADVTGIWG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEEEECCCHHHH VTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQ CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCE LVVWPEGALRARLLNTGLEPYVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNT EEEECCHHHHHHHHHCCCCCEEECCHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHH ALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDGGELFGPLGVMICLESVLPAP HEEEECCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS CHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCC GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG CCHHHHHHHHHCCCEEHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGL CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHH CEQRQGWARWRLAYGLWFWVCLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWGSLLFDWPLGIQVADVTGIWG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEEEECCCHHHH VTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQ CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCE LVVWPEGALRARLLNTGLEPYVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNT EEEECCHHHHHHHHHCCCCCEEECCHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHH ALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDGGELFGPLGVMICLESVLPAP HEEEECCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS CHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCC GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG CCHHHHHHHHHCCCEEHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA