Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is lnt [H]

Identifier: 86608882

GI number: 86608882

Start: 1482257

End: 1483867

Strand: Reverse

Name: lnt [H]

Synonym: CYB_1414

Alternate gene names: 86608882

Gene position: 1483867-1482257 (Counterclockwise)

Preceding gene: 86608884

Following gene: 86608880

Centisome position: 48.7

GC content: 61.02

Gene sequence:

>1611_bases
ATGAAGCCGGAACTGAAATCTTCAACTCAACAGCAGGATCTGCCCCAAAAGAGAAATCCAGGCGAGGGATCCCGCTGGCT
GATGGGTCTAGCCATCCTGCTGCTCTGTCTGGGATCCCCCAACCGCTGGCTGCACTGGTTTCCGGGAGCGCTGCTGGGCC
TAGCCCTGCTGTTTGGCCTGTGCGAGCAACGGCAAGGGTGGGCGCGGTGGCGTTTGGCCTATGGCCTCTGGTTTTGGGTT
TGCCTGTATGCCTTCTGGGTGGATCCCTTCTCGGTTGAGGTGTTGAGCGCCTGGGAGATCCTAGGGGGCGTGGTGGTGGC
TCCCCTGATCCCCCTCTTTTTCACCACCGCTACGCTCCTCAGTTTGGAGCTGAGCCGCCCCCTGCCGGCTTGGGCACGTC
CGCTGGGCTTGGCCACGGTCTGGACAGGCTTGGATGGGCTGTTGGGCTTGCTCTGGTGGCCCATCCCTTTCCACTGGGGA
TCCCTGTTGTTCGACTGGCCCCTCGGGATCCAAGTAGCCGATGTTACGGGGATCTGGGGGGTTACCTTTTTTGCCGTGTT
CGTCAATGGGGTTCTTTGGCAGATGGCCAGGCAGATTTCTAGCCGGTGGCAGGCGGCTGGGGGATCCCTGAGAAACGTTT
TGGGTGAGATGCTCAGGAACAGGGATTTCTGGGGTACGCTCGCCTGCGGCCTGGGGTTGACGGGGCTGGTCTTGGCCTAT
GGAAGCGCACGCCTGGCCTACTTCGATGCCTTGGCCGTCGAAAACAGGGATCCTGACTTTCGGGTGGCGGCGGTGCAGCA
GGTGGCTTGGCTGGAAGCCGATCGCAGTTGGAACTACCGCCTGGAGCGCTACCGGGAGCTGCATCAGCTTTCTGCCCAGG
GGGTGGCTGCTGGGGCACAGTTGGTGGTTTGGCCGGAGGGGGCGCTGCGGGCACGGCTGCTGAATACTGGCCTGGAACCC
TACGTGATCGAGCCAATGCAAGCGATTCTGCCGCCGGAAGGCGCTTTGATTACGGGGGCAACAGAGCCGGATCCCCGCAC
AGCCCATTTGCCGGAGCCAGAGCAGCGATTTTTTAACACGGCCCTGTTGTTTGACGCCCGGGGCAACTTGCTGGATGGGT
TTGGCAAGCAGTGGATCTTTCCCTATTTCGAGTCGGGGCGCTACGTGCCTTCACCCGATGGCTATCGGCCTCTGGACGGA
GGGGAGCTTTTCGGGCCTTTGGGGGTGATGATCTGCTTGGAGAGCGTCTTGCCTGCGCCCAGCCGAACTTTAACCCGTCG
CGGCGCCGAGTCTTTGATCGTGATTTCGGATGATAGCTGGTTTGGTAATAGCCACTGGCCGATGTTGCATGGCCAGCTCT
CGGTTTTCCGGGCTGTGGAAAATCGGCGGGGCGTGGTGTTTGTCAATAACACAGGCGGCAATCTGGTGGTGGATCCCTCA
GGTCGGCTCCAGCAGGTTGGCCCCATCTTTCAGCGGGGGGTGATTACGGGAGAAGTGAAGCGGCGTTCTGAGACAACTTT
CTACAATCGCGCGGGGGATTGGCTGGCGTGGCTGACGTTGGGGCTATCTTTGGGGCTATGGCGCTGGGGATCCCGAGCAA
GGCAAGGATGA

Upstream 100 bases:

>100_bases
GCTGCAAAACGCTACTCTGGAGAAGAGCTGTTGGCAAGGGCGTGTTCAATCCTAGGGCATTACGTGGGGTTTCCCGAATA
GGCTGAACTTTATTGAGGTG

Downstream 100 bases:

>100_bases
GTTAGAATCGATAGGCCCACCGGTGGGTCTGCGGATTCTCCTATCCAGTCCTCACTTCAAAGCCCTGCTGATGTAGCTCA
GTTGGTAGAGCAGCTCACTC

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGLCEQRQGWARWRLAYGLWFWV
CLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLLSLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWG
SLLFDWPLGIQVADVTGIWGVTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY
GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQLVVWPEGALRARLLNTGLEP
YVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNTALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDG
GELFGPLGVMICLESVLPAPSRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS
GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG

Sequences:

>Translated_536_residues
MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGLCEQRQGWARWRLAYGLWFWV
CLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLLSLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWG
SLLFDWPLGIQVADVTGIWGVTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY
GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQLVVWPEGALRARLLNTGLEP
YVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNTALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDG
GELFGPLGVMICLESVLPAPSRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS
GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG
>Mature_536_residues
MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGLCEQRQGWARWRLAYGLWFWV
CLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLLSLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWG
SLLFDWPLGIQVADVTGIWGVTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY
GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQLVVWPEGALRARLLNTGLEP
YVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNTALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDG
GELFGPLGVMICLESVLPAPSRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS
GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=285, Percent_Identity=24.9122807017544, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 59892; Mature: 59892

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGL
CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHH
CEQRQGWARWRLAYGLWFWVCLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLL
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWGSLLFDWPLGIQVADVTGIWG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEEEECCCHHHH
VTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQ
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCE
LVVWPEGALRARLLNTGLEPYVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNT
EEEECCHHHHHHHHHCCCCCEEECCHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHH
ALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDGGELFGPLGVMICLESVLPAP
HEEEECCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
SRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS
CHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCC
GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG
CCHHHHHHHHHCCCEEHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MKPELKSSTQQQDLPQKRNPGEGSRWLMGLAILLLCLGSPNRWLHWFPGALLGLALLFGL
CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHH
CEQRQGWARWRLAYGLWFWVCLYAFWVDPFSVEVLSAWEILGGVVVAPLIPLFFTTATLL
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLELSRPLPAWARPLGLATVWTGLDGLLGLLWWPIPFHWGSLLFDWPLGIQVADVTGIWG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEEEECCCHHHH
VTFFAVFVNGVLWQMARQISSRWQAAGGSLRNVLGEMLRNRDFWGTLACGLGLTGLVLAY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GSARLAYFDALAVENRDPDFRVAAVQQVAWLEADRSWNYRLERYRELHQLSAQGVAAGAQ
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCE
LVVWPEGALRARLLNTGLEPYVIEPMQAILPPEGALITGATEPDPRTAHLPEPEQRFFNT
EEEECCHHHHHHHHHCCCCCEEECCHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHH
ALLFDARGNLLDGFGKQWIFPYFESGRYVPSPDGYRPLDGGELFGPLGVMICLESVLPAP
HEEEECCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
SRTLTRRGAESLIVISDDSWFGNSHWPMLHGQLSVFRAVENRRGVVFVNNTGGNLVVDPS
CHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCC
GRLQQVGPIFQRGVITGEVKRRSETTFYNRAGDWLAWLTLGLSLGLWRWGSRARQG
CCHHHHHHHHHCCCEEHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA