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The map label for this gene is 86608869

Identifier: 86608869

GI number: 86608869

Start: 1468228

End: 1468863

Strand: Direct

Name: 86608869

Synonym: CYB_1400

Alternate gene names: NA

Gene position: 1468228-1468863 (Clockwise)

Preceding gene: 86608864

Following gene: 86608875

Centisome position: 48.19

GC content: 57.7

Gene sequence:

>636_bases
ATGGCCCGTCTGTCTCAAGAGCTAGCCCGGTTTTCCCGCCTTCCCGAGAGCCCAGAGCAACCCGAACCCTCCCCGGAAGG
GTTGATCCGCATCGAAGACATTCTAAAACTGGCGGGCGAGCGCAGTTTTGGCTTGTTTTTGGCGGTGCTCTCTTTCCCTT
CTGCTTTGCCTCTGCCGGCTCCCGGCTATTCCACTCCCTTTGGCGTGGTCATCCTGTTGCTGGCCGCACAAATGCTGGCA
GGGCGAACCACTCCTTGGCTGCCGAAATGGGTGTTGCAGACCTCTATTGAACGGAAGCATTTTCAAAAGTGGGTGCAGGC
TGGGATCCCATGGTTGCAGCGCATTGAAAAAATTGCCCGCCCCCGTTGGAAGCAGCTTTGCACCACACGGCTCGGCCAAG
TCTGGCTGGGCACCTGGATCGGCTTGATGGGGATTTCCATGATCATCCCCGTTCCAGGCACCAACACCCTGCCGGCAATG
GGGGTTTTCGTCACCGCCTTTGGCCTCCTGGAAGAAGACGGGATCCTGTGCAGCTTGGGATCCCTGATCTGTGTAGCAGG
AGGACTGCTGACCACTTCCATTTTGATCGGCCTGTGGTTGGGGGGAACAACCCTTTTGGATTGGCTGGGAAGATAG

Upstream 100 bases:

>100_bases
AGATATCCAACACAACTTGAATTTGCAGTAGGCTATCGTTGGCCCTCCAGGTAGTGCCCACCCGTTGCCAAACTTTGCCC
GCTCCAGCCCTGCCCCCTCT

Downstream 100 bases:

>100_bases
CTATGCCAGCACCGCTTTTATCGGGATGCTGGGGTCAGCGCCAGATCCTGAGTGAGGCGCAGCTCGATCACCTGATTGGG
ATCCAGCACCACCACCTGTG

Product: ExoD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MARLSQELARFSRLPESPEQPEPSPEGLIRIEDILKLAGERSFGLFLAVLSFPSALPLPAPGYSTPFGVVILLLAAQMLA
GRTTPWLPKWVLQTSIERKHFQKWVQAGIPWLQRIEKIARPRWKQLCTTRLGQVWLGTWIGLMGISMIIPVPGTNTLPAM
GVFVTAFGLLEEDGILCSLGSLICVAGGLLTTSILIGLWLGGTTLLDWLGR

Sequences:

>Translated_211_residues
MARLSQELARFSRLPESPEQPEPSPEGLIRIEDILKLAGERSFGLFLAVLSFPSALPLPAPGYSTPFGVVILLLAAQMLA
GRTTPWLPKWVLQTSIERKHFQKWVQAGIPWLQRIEKIARPRWKQLCTTRLGQVWLGTWIGLMGISMIIPVPGTNTLPAM
GVFVTAFGLLEEDGILCSLGSLICVAGGLLTTSILIGLWLGGTTLLDWLGR
>Mature_210_residues
ARLSQELARFSRLPESPEQPEPSPEGLIRIEDILKLAGERSFGLFLAVLSFPSALPLPAPGYSTPFGVVILLLAAQMLAG
RTTPWLPKWVLQTSIERKHFQKWVQAGIPWLQRIEKIARPRWKQLCTTRLGQVWLGTWIGLMGISMIIPVPGTNTLPAMG
VFVTAFGLLEEDGILCSLGSLICVAGGLLTTSILIGLWLGGTTLLDWLGR

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 23138; Mature: 23007

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSQELARFSRLPESPEQPEPSPEGLIRIEDILKLAGERSFGLFLAVLSFPSALPLPA
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
PGYSTPFGVVILLLAAQMLAGRTTPWLPKWVLQTSIERKHFQKWVQAGIPWLQRIEKIAR
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
PRWKQLCTTRLGQVWLGTWIGLMGISMIIPVPGTNTLPAMGVFVTAFGLLEEDGILCSLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
SLICVAGGLLTTSILIGLWLGGTTLLDWLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARLSQELARFSRLPESPEQPEPSPEGLIRIEDILKLAGERSFGLFLAVLSFPSALPLPA
CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
PGYSTPFGVVILLLAAQMLAGRTTPWLPKWVLQTSIERKHFQKWVQAGIPWLQRIEKIAR
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
PRWKQLCTTRLGQVWLGTWIGLMGISMIIPVPGTNTLPAMGVFVTAFGLLEEDGILCSLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
SLICVAGGLLTTSILIGLWLGGTTLLDWLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]