| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608857
Identifier: 86608857
GI number: 86608857
Start: 1458975
End: 1460996
Strand: Direct
Name: 86608857
Synonym: CYB_1388
Alternate gene names: NA
Gene position: 1458975-1460996 (Clockwise)
Preceding gene: 86608855
Following gene: 86608858
Centisome position: 47.89
GC content: 57.62
Gene sequence:
>2022_bases ATGCAAATTCAACTGAGCTGGGAAGATCCCATCACCGAAGAACAGCAGGAGCTGATTTTTCCATTGCCTCTTGCCTTGGG CAGGGAGCTGGCCCAATTGCCACAGGAATGGCAAGGTCGAGAAGTGGCGCGGGCTGTGTTTGCCAGCCAGGAGATCTCCC GTTATCACGCCCTCGTCTATCTCGGTGAGGATGGCCAGGTCATCTATGAAGATCGCAGTGCCAACGGCAGCCGCATCAAT GGGGAAAAAATCCGTCAGGCACGCCGGGTGCTCCAGGGGGGAGAAGTGGTGGAGCTTGGCCCCTACAGCATCACCGTGGG TTTGGTGTCCCCCAGGGATCCCAATGCCACCCTTCTGACCGCCACCCCTACTCTTTTGCTGGAGCCGCGCACCGAACTGA TTCGCCCGGCCACCCAACCCGACACCGCATTTGAGGTTCCCCCGGCTTCCACGGTGGTTTTTGCCCCAGAGCAGCTTCCC GAGGTGCGGCCTGGCTCGGATTTTCCGCCGCCGGATTTGTTTCGAGCTGAGCAAATTGCCCTGAGCGCCCTCAAAGCCAC CGGACTACCTGTGGAAGAGACCCTCTATTTGGCCTTGGGCGGCGGTATCGGCAGCTTTGTCTGGGTGGATACCCTGCGCA TCTACGGGGTCAGACCGGAACACATCCGCGTCATCAGCATTGCCCGCAAACCCTACGAACGGTATGAACGGCTTTTGACC AACTGCCAGATCCCCCGCTGGAAGCGAATTCGCTCTGGCTCCGATTCTTGTCCAGACAACATTTGGGGCTGGCCTGGCTA TGCTCTGCGGGATGCTTGGCGTTCCTTTTTCTCCGGCCGATTGTTGGAAGCATTCGGCTTTTTGTGGCAGGTATTTAGTG AGCCCTTGTTGGCAGATACCTATACGCCGCGGGCGGGGGATGTATTTGCCTCAATGGATCGGGAGGCAGCCCGAATTGGT TGGGAGCAAATGTTGTGTTACGGCCATATTCGCGCCATTCGCAAAACGGAGGATGGGCGATATGTGGTGGCCTATTCGGC AACGCGGCCCGGCCATACGGATCACCGTTTTATGGTGGCCAAGTATCTCCATTTGGCAACTGGATATCCGGCCATCAAGT TGCTCAACGACCTGCAGGAGTTTCGCGAAAAAACAGGAGATTTGAGATCGGTGGTACACGGCTATGAGCCTCATGATCAC GTTTATGAGCAGTTGGAGAAACAAGGTGGCACCGTCCTAATTCGGGGATTTGGGATCGTCGCCTCTCAGGTGATGGAACG CCTTTACGAAGCCCGCAAAGTCAACCCCCGCATCTCGGTGGTGCATCTGAGCCGTGCGCCCAAAAGCGGTAATCGCTTCG GACGAGCCAAACGGGCAGTGGATAACCATTGGGAGTTTCAGCCCTTCAACTGGCCCAAGGGCACTTGGGGAGGAGTTCTG CGTGCCAAATTGGAAGCGGCGACCCCCCTGGAACGGCGCGAACTGCTGGAAGCTTGGGGCGGCACCACGACAGCAAGTCG GCGGAAATGGCGGCGGATCGTGCGGCAAGGGTTGCGAGAGGGCTGGTACTCGATTGTGTTTGGCAAGGTGGAGCTGGTGG TTCCCGGCGACAAGGGTAAGCCGGTGACCTACATTCGAGGTACCCACAACAACACACAATTAAAGGTGGAGGCCGATTTC GTTATCGACTGTACGGGTTTGGTTTCGGATCCCATGACCAATCCTCTCCTCAACGATCTAATTACCCACTACAACCTGCC CCTCAATCCTCACGGGCGCTTGCATGTCTCCAACGACTTTGAGCTGGTGGAGATGCGCAACCGGGATGGGCGAATGTACG CCGCTGGGATCATCACCTTGGGCGGGCCCTATGCGCCGGTGGATACGTTTTTGGGTTTACAGTACTGTGCCCATCGCTCG GTGGAACACCTGGCTCGACTGCGGGCACCGGGGGTCAAAGGTCTAGAAGGGATCCGATCCCTGTGGCAATGGTGCAAGTG GGCCCTAAACATCAGCCCCTAG
Upstream 100 bases:
>100_bases GGCAAACCAAAAGTGACCTGTGAGGTCGCGCTGTTCTGTGTTTTCTCAATGGCCTCTTCATGATCTTTGTACATGATCTT TGTAAAGGTGAGCAGAAGCT
Downstream 100 bases:
>100_bases CTTGCCGACATTGGGCAACGCTTCTGGATTTTGTGAGATGTTTTTGGTTATCAACGCTGTCCCACACGTAAAACATTGGC GGCACACCATGGCCATTCCC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; FHA Domain Protein
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MQIQLSWEDPITEEQQELIFPLPLALGRELAQLPQEWQGREVARAVFASQEISRYHALVYLGEDGQVIYEDRSANGSRIN GEKIRQARRVLQGGEVVELGPYSITVGLVSPRDPNATLLTATPTLLLEPRTELIRPATQPDTAFEVPPASTVVFAPEQLP EVRPGSDFPPPDLFRAEQIALSALKATGLPVEETLYLALGGGIGSFVWVDTLRIYGVRPEHIRVISIARKPYERYERLLT NCQIPRWKRIRSGSDSCPDNIWGWPGYALRDAWRSFFSGRLLEAFGFLWQVFSEPLLADTYTPRAGDVFASMDREAARIG WEQMLCYGHIRAIRKTEDGRYVVAYSATRPGHTDHRFMVAKYLHLATGYPAIKLLNDLQEFREKTGDLRSVVHGYEPHDH VYEQLEKQGGTVLIRGFGIVASQVMERLYEARKVNPRISVVHLSRAPKSGNRFGRAKRAVDNHWEFQPFNWPKGTWGGVL RAKLEAATPLERRELLEAWGGTTTASRRKWRRIVRQGLREGWYSIVFGKVELVVPGDKGKPVTYIRGTHNNTQLKVEADF VIDCTGLVSDPMTNPLLNDLITHYNLPLNPHGRLHVSNDFELVEMRNRDGRMYAAGIITLGGPYAPVDTFLGLQYCAHRS VEHLARLRAPGVKGLEGIRSLWQWCKWALNISP
Sequences:
>Translated_673_residues MQIQLSWEDPITEEQQELIFPLPLALGRELAQLPQEWQGREVARAVFASQEISRYHALVYLGEDGQVIYEDRSANGSRIN GEKIRQARRVLQGGEVVELGPYSITVGLVSPRDPNATLLTATPTLLLEPRTELIRPATQPDTAFEVPPASTVVFAPEQLP EVRPGSDFPPPDLFRAEQIALSALKATGLPVEETLYLALGGGIGSFVWVDTLRIYGVRPEHIRVISIARKPYERYERLLT NCQIPRWKRIRSGSDSCPDNIWGWPGYALRDAWRSFFSGRLLEAFGFLWQVFSEPLLADTYTPRAGDVFASMDREAARIG WEQMLCYGHIRAIRKTEDGRYVVAYSATRPGHTDHRFMVAKYLHLATGYPAIKLLNDLQEFREKTGDLRSVVHGYEPHDH VYEQLEKQGGTVLIRGFGIVASQVMERLYEARKVNPRISVVHLSRAPKSGNRFGRAKRAVDNHWEFQPFNWPKGTWGGVL RAKLEAATPLERRELLEAWGGTTTASRRKWRRIVRQGLREGWYSIVFGKVELVVPGDKGKPVTYIRGTHNNTQLKVEADF VIDCTGLVSDPMTNPLLNDLITHYNLPLNPHGRLHVSNDFELVEMRNRDGRMYAAGIITLGGPYAPVDTFLGLQYCAHRS VEHLARLRAPGVKGLEGIRSLWQWCKWALNISP >Mature_673_residues MQIQLSWEDPITEEQQELIFPLPLALGRELAQLPQEWQGREVARAVFASQEISRYHALVYLGEDGQVIYEDRSANGSRIN GEKIRQARRVLQGGEVVELGPYSITVGLVSPRDPNATLLTATPTLLLEPRTELIRPATQPDTAFEVPPASTVVFAPEQLP EVRPGSDFPPPDLFRAEQIALSALKATGLPVEETLYLALGGGIGSFVWVDTLRIYGVRPEHIRVISIARKPYERYERLLT NCQIPRWKRIRSGSDSCPDNIWGWPGYALRDAWRSFFSGRLLEAFGFLWQVFSEPLLADTYTPRAGDVFASMDREAARIG WEQMLCYGHIRAIRKTEDGRYVVAYSATRPGHTDHRFMVAKYLHLATGYPAIKLLNDLQEFREKTGDLRSVVHGYEPHDH VYEQLEKQGGTVLIRGFGIVASQVMERLYEARKVNPRISVVHLSRAPKSGNRFGRAKRAVDNHWEFQPFNWPKGTWGGVL RAKLEAATPLERRELLEAWGGTTTASRRKWRRIVRQGLREGWYSIVFGKVELVVPGDKGKPVTYIRGTHNNTQLKVEADF VIDCTGLVSDPMTNPLLNDLITHYNLPLNPHGRLHVSNDFELVEMRNRDGRMYAAGIITLGGPYAPVDTFLGLQYCAHRS VEHLARLRAPGVKGLEGIRSLWQWCKWALNISP
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76137; Mature: 76137
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIQLSWEDPITEEQQELIFPLPLALGRELAQLPQEWQGREVARAVFASQEISRYHALVY CEEEEECCCCCCCCHHHEEECCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCEEEEEE LGEDGQVIYEDRSANGSRINGEKIRQARRVLQGGEVVELGPYSITVGLVSPRDPNATLLT ECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCCCCEEEE ATPTLLLEPRTELIRPATQPDTAFEVPPASTVVFAPEQLPEVRPGSDFPPPDLFRAEQIA ECCEEEECCCHHHHCCCCCCCCCEECCCCCEEEECHHHCCCCCCCCCCCCCCHHHHHHHH LSALKATGLPVEETLYLALGGGIGSFVWVDTLRIYGVRPEHIRVISIARKPYERYERLLT HHHHHHCCCCHHHEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEHHCHHHHHHHHHH NCQIPRWKRIRSGSDSCPDNIWGWPGYALRDAWRSFFSGRLLEAFGFLWQVFSEPLLADT CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC YTPRAGDVFASMDREAARIGWEQMLCYGHIRAIRKTEDGRYVVAYSATRPGHTDHRFMVA CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH KYLHLATGYPAIKLLNDLQEFREKTGDLRSVVHGYEPHDHVYEQLEKQGGTVLIRGFGIV HHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHHH ASQVMERLYEARKVNPRISVVHLSRAPKSGNRFGRAKRAVDNHWEFQPFNWPKGTWGGVL HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH RAKLEAATPLERRELLEAWGGTTTASRRKWRRIVRQGLREGWYSIVFGKVELVVPGDKGK HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCC PVTYIRGTHNNTQLKVEADFVIDCTGLVSDPMTNPLLNDLITHYNLPLNPHGRLHVSNDF CEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCC ELVEMRNRDGRMYAAGIITLGGPYAPVDTFLGLQYCAHRSVEHLARLRAPGVKGLEGIRS EEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LWQWCKWALNISP HHHHHHHHCCCCC >Mature Secondary Structure MQIQLSWEDPITEEQQELIFPLPLALGRELAQLPQEWQGREVARAVFASQEISRYHALVY CEEEEECCCCCCCCHHHEEECCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCEEEEEE LGEDGQVIYEDRSANGSRINGEKIRQARRVLQGGEVVELGPYSITVGLVSPRDPNATLLT ECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCCCCEEEE ATPTLLLEPRTELIRPATQPDTAFEVPPASTVVFAPEQLPEVRPGSDFPPPDLFRAEQIA ECCEEEECCCHHHHCCCCCCCCCEECCCCCEEEECHHHCCCCCCCCCCCCCCHHHHHHHH LSALKATGLPVEETLYLALGGGIGSFVWVDTLRIYGVRPEHIRVISIARKPYERYERLLT HHHHHHCCCCHHHEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEHHCHHHHHHHHHH NCQIPRWKRIRSGSDSCPDNIWGWPGYALRDAWRSFFSGRLLEAFGFLWQVFSEPLLADT CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC YTPRAGDVFASMDREAARIGWEQMLCYGHIRAIRKTEDGRYVVAYSATRPGHTDHRFMVA CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH KYLHLATGYPAIKLLNDLQEFREKTGDLRSVVHGYEPHDHVYEQLEKQGGTVLIRGFGIV HHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHHH ASQVMERLYEARKVNPRISVVHLSRAPKSGNRFGRAKRAVDNHWEFQPFNWPKGTWGGVL HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH RAKLEAATPLERRELLEAWGGTTTASRRKWRRIVRQGLREGWYSIVFGKVELVVPGDKGK HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCC PVTYIRGTHNNTQLKVEADFVIDCTGLVSDPMTNPLLNDLITHYNLPLNPHGRLHVSNDF CEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCC ELVEMRNRDGRMYAAGIITLGGPYAPVDTFLGLQYCAHRSVEHLARLRAPGVKGLEGIRS EEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LWQWCKWALNISP HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA