| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608770
Identifier: 86608770
GI number: 86608770
Start: 1355062
End: 1357113
Strand: Reverse
Name: 86608770
Synonym: CYB_1295
Alternate gene names: NA
Gene position: 1357113-1355062 (Counterclockwise)
Preceding gene: 86608771
Following gene: 86608769
Centisome position: 44.54
GC content: 51.41
Gene sequence:
>2052_bases ATGAATCCTCGAGTTCTACTAGTTTGGATGACTCCACCTGATTATGTCCCACCTCTCACTCTTTCAGAGCGTCAAGTAAC TCTATGTCCGAAAGGAAAGGTTAGAAGACAGATATTCGATTTTTTTAGTGTTCCAAAAAGCTTAGTTGAGTGTCCTGACA AAGACTTTGACCTCTATGAATTTGTCCAGTATTCAGATCAAGTCGAAGACAAAGAATTTGACTTGGTGATTGTCTGGACA TCGAGTGTTGATCTGACTAGTCCTTTCAACACGAAAAAATTTGGCTGCCCAACTGTCTTGCTAGCCGGAGATACGCATCA TCATGTGCTCCCTATCACCCACCTTCTAACTTACTGGGCCACTGAAGCCTTTGATTATATTGCCACCGCCTATGACCGAC AGCACCTCCACTGGTTCGCAGCAGCAGGAGTTCAAAGGCTAGCTTGGCTGCCTTTCATTTCCGCTTGTCTCACCAGCTCC AGTTGGATAGAAAAGAAAGAAATTAGAGTTGCGTTTGTGGGTAACCTTAATTTTAACTCTTATCATTACAGACGTCTTAA GTTGATCATGTCCTTGAAAAAACTGGGTCTACCTCTACTTATAAAGACTCGAGTCCACAATCCTCAACTAATATTTGGTG GCTCGTTAATCTCTTTCAACTGCAGCCAAAATGGGGATCTGAACTTAAGGAACTTGGAAGTGATTTCTGCAGGGGGCTTT CTGCTCACTGACCAGCTCTCCTTCGCCTCAGGATTGGACGAACTTTTGGCGCCCGGCACCTACTGCGACACCTACAACTC CGAAGCCGAACTCCTGGAAAAAGTTCGCTACTACCTAGACCATCCCCAAGAAGCCATTCAAATTGCCCGCCGCGCTTACC ACACCTTTGATGAAAAGTGGCATCCCCGCCACCGCATTCAGAACCTGCTGGACTGGGTGTTTGGGGGAGAGCTGCCGGAG CCCTTTCGTTACTCGCCCCGCTCTGATGTGCGCTACTTTGTCAGCACGGCCAGCTCTGCCTGGATAGACACACGACTAGG AATCTACGAGCCCATTCAAGAGCTGCATCGCGTGCAGGAGCGACTGAGGGTATTTGTTGGCCGAGGCTGTCCTGGGGTGA TAGCCGCGGACTTGCTGGACTTGCCGCGGCTGGAGCTGTACGTGGAAGAGGGGTTTGGGGATCCCTGTGCCCTGCTGCAG CAGAAGGGAGTGCCCGAGCGAATTCACGAGGTGAGAGGAGAGCCAGCCAGTTGGCCCAGCTTTGATGCTGTGGTGTGCAC AGCTGAGGACTTGCAGCGGCTGGGGCGGTCTGTGAGGGCTAACTTTGCTTTTGTCTTGGCAGAGGACCACCAACTTCTTT TGGCCAATGCCAGTAAGTTAATGGAAGCAGTGTTGACTGGCTTTGACTTTGGCAAACTCAGGTTTTCGGTAAAGCTCTAC CCAGACACCGTTTTTTACGAGAGGACGTATCTTAACTTTCCTGTGTTTCTGTCTAGCCAGGTGCAGACGGTTATCGACAT CGGAGCTGGGGTAGGCCTTGGTAGCGTTTGTTTTCGGGGTTTCTGCCCTGAGGCGGCCATTCATTGTTTTGAGGTGGATC CCTTGGCCTTGCACCTGCTGCAGCAGAATGCTCTTGGCCTGGGCAACTGCTTTGTGCATCCAGTGGGGCTGGCGGGGCAG GATAGTTGCAGAACTTGTCGGCTCTGGCCGGAGGATCCTCAGGCCGAGTGGGGAGTGGAGCAGGTGCTCCCTTTCCGGGA AGCCAGGGCAGCCCTCAAGGAGTTGGGTTTGGAGCCCATCGATGTGCTCAGGGTGGCTACAGGTGGAGAGGAGGTGGAGG TGTTGACCAGCCTGCAAGAGCAGCTCAAAGACATCAAGGTGATTTACGTGGAGTTTACTTCTGAGCAAGACCGCAAGCAG ATTGACCAGATGTTGGACCCTACCCATCTCCTCTGGCAGGGAGAAATTGTAGCAGGCCAAAGAGGAGTCCTTTGCTATCT AAGCAGGGCTTGCTTTGTCGACAACAATTCAAGCCTTGGAGGAGAGACTTAA
Upstream 100 bases:
>100_bases GCAGGAGGAAGTTTCTCAGGGTAACTACGGGTGCTTATGTTATCTGAATAGATGCATATTCTACGAAAGCAGTGGTAATC TTTAGGAAGCTCTGAGACTG
Downstream 100 bases:
>100_bases GGTTATGAACTCAACCATTATCGTTACGGCTGCTGACAGCAAGTTTTTTGAATTGGTTCAGGGGACCATTCTCTCCATCC GAGAAAAACCTCAGGGGCAC
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Methyltransferase FkbM
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MNPRVLLVWMTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFISACLTSS SWIEKKEIRVAFVGNLNFNSYHYRRLKLIMSLKKLGLPLLIKTRVHNPQLIFGGSLISFNCSQNGDLNLRNLEVISAGGF LLTDQLSFASGLDELLAPGTYCDTYNSEAELLEKVRYYLDHPQEAIQIARRAYHTFDEKWHPRHRIQNLLDWVFGGELPE PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCALLQ QKGVPERIHEVRGEPASWPSFDAVVCTAEDLQRLGRSVRANFAFVLAEDHQLLLANASKLMEAVLTGFDFGKLRFSVKLY PDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAGQ DSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKQ IDQMLDPTHLLWQGEIVAGQRGVLCYLSRACFVDNNSSLGGET
Sequences:
>Translated_683_residues MNPRVLLVWMTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFISACLTSS SWIEKKEIRVAFVGNLNFNSYHYRRLKLIMSLKKLGLPLLIKTRVHNPQLIFGGSLISFNCSQNGDLNLRNLEVISAGGF LLTDQLSFASGLDELLAPGTYCDTYNSEAELLEKVRYYLDHPQEAIQIARRAYHTFDEKWHPRHRIQNLLDWVFGGELPE PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCALLQ QKGVPERIHEVRGEPASWPSFDAVVCTAEDLQRLGRSVRANFAFVLAEDHQLLLANASKLMEAVLTGFDFGKLRFSVKLY PDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAGQ DSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKQ IDQMLDPTHLLWQGEIVAGQRGVLCYLSRACFVDNNSSLGGET >Mature_683_residues MNPRVLLVWMTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFISACLTSS SWIEKKEIRVAFVGNLNFNSYHYRRLKLIMSLKKLGLPLLIKTRVHNPQLIFGGSLISFNCSQNGDLNLRNLEVISAGGF LLTDQLSFASGLDELLAPGTYCDTYNSEAELLEKVRYYLDHPQEAIQIARRAYHTFDEKWHPRHRIQNLLDWVFGGELPE PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCALLQ QKGVPERIHEVRGEPASWPSFDAVVCTAEDLQRLGRSVRANFAFVLAEDHQLLLANASKLMEAVLTGFDFGKLRFSVKLY PDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAGQ DSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKQ IDQMLDPTHLLWQGEIVAGQRGVLCYLSRACFVDNNSSLGGET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77342; Mature: 77342
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPRVLLVWMTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYE CCCCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHH FVQYSDQVEDKEFDLVIVWTSSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWA HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH TEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFISACLTSSSWIEKKEIRVAFVGNLNFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCC YHYRRLKLIMSLKKLGLPLLIKTRVHNPQLIFGGSLISFNCSQNGDLNLRNLEVISAGGF HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEEEECCCCCCCEEEEEEEEECCCE LLTDQLSFASGLDELLAPGTYCDTYNSEAELLEKVRYYLDHPQEAIQIARRAYHTFDEKW EEECCHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC HPRHRIQNLLDWVFGGELPEPFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQE CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH RLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCALLQQKGVPERIHEVRGEPASWPS HHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCCCCC FDAVVCTAEDLQRLGRSVRANFAFVLAEDHQLLLANASKLMEAVLTGFDFGKLRFSVKLY CCEEEECHHHHHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEC PDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLL CCEEEEEEEEECCCEEECHHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCHHHHHHH QQNALGLGNCFVHPVGLAGQDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPI HHCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHH DVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKQIDQMLDPTHLLWQGEIVAGQ HHEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEECEEEECC RGVLCYLSRACFVDNNSSLGGET CCCEEEEEHHEEECCCCCCCCCC >Mature Secondary Structure MNPRVLLVWMTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYE CCCCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHH FVQYSDQVEDKEFDLVIVWTSSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWA HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH TEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFISACLTSSSWIEKKEIRVAFVGNLNFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCC YHYRRLKLIMSLKKLGLPLLIKTRVHNPQLIFGGSLISFNCSQNGDLNLRNLEVISAGGF HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEEEECCCCCCCEEEEEEEEECCCE LLTDQLSFASGLDELLAPGTYCDTYNSEAELLEKVRYYLDHPQEAIQIARRAYHTFDEKW EEECCHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC HPRHRIQNLLDWVFGGELPEPFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQE CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH RLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCALLQQKGVPERIHEVRGEPASWPS HHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCCCCC FDAVVCTAEDLQRLGRSVRANFAFVLAEDHQLLLANASKLMEAVLTGFDFGKLRFSVKLY CCEEEECHHHHHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEC PDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLL CCEEEEEEEEECCCEEECHHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCHHHHHHH QQNALGLGNCFVHPVGLAGQDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPI HHCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHH DVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKQIDQMLDPTHLLWQGEIVAGQ HHEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEECEEEECC RGVLCYLSRACFVDNNSSLGGET CCCEEEEEHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA