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The map label for this gene is cbaA [H]

Identifier: 86608703

GI number: 86608703

Start: 1268972

End: 1269817

Strand: Reverse

Name: cbaA [H]

Synonym: CYB_1226

Alternate gene names: 86608703

Gene position: 1269817-1268972 (Counterclockwise)

Preceding gene: 86608705

Following gene: 86608701

Centisome position: 41.68

GC content: 55.67

Gene sequence:

>846_bases
ATGCTTGTTACCCAGCAACCTGTCCTGAGGCGGTTTTGGTACCCCGTGATCCCGATGTCGGCCCTGGAAACCGGCCCACA
AGCTTTCACGCTGCTGAAGACTCCTCTGGTGCTTTGGCTCAATGAGTCAGGGCAGCCTTGCGCCGTCTTGGATCGTTGCT
GCCATCGCTCGGCCCAACTTTCCAAAGGGGTTGTTTGCAATGGCCACATCCGCTGCCCCTATCACGGCTGGGAGTTTGAC
GGCTCCGGCACCTGTGTGAAGGTGCCCCAACTTACAGACAACTTCATCCCCCCTACCTACAAGGTGGAGGGGTTTCGCTG
CCAAGAGCGCTATGGCTATGTTTGGGTGGCATTGGCGGATCCCTTGACCGATATTCCCGAGATCCCAGAGGTGGCGGATT
CCCGGTTTCGCCAAATTCATCAGTTCTATGAGGTCTGGAAATGCGCCGGCCTGCGCCTGATGGAAAACTCCTTTGACAAT
GCCCATCTCCACTTCGTCCATCACCAGAGCTTTGGGGTGATCTCCGAGCCTGTACCCCCAGATCTGGACAGCCTTGAAGA
ACTGGAATATGGCCTTCGGGCCACCTCTGTTTTGCCGGTGTTCAACAGTGACTTGCAGAAGCAAAACTTGCGGATGTCAG
AGGATCGCACAGTGCGTATCCTGGAGGGCACCTGGTTTATGCCTTTTGGTCGCAAGCTCAAAATCACCTACCCCAACGGC
CTCATCCACATCATTTTCACAGCGGCTACCCCCATCGACGACCAAACCTCGCAGGTGGTGCAATTCTGTTTGCGCAACGA
TTCAGAAGCAGAGGTGAGTGGTAAACTACCCGACTCCGACCGCTAA

Upstream 100 bases:

>100_bases
TCAACGCCTATCTTTTTCACGGGGGGCGGTGCTTTGAGCCACCTAGGCTCACGAAAAGCCAGCTCATGATTCTCCGAACT
AGAGCTTGTGGAGCGGGTTT

Downstream 100 bases:

>100_bases
AGCGGTACGGAGCGGGCTTTCAGTAGCCCTGAGCCTGCTCTGCCCTACCAGAGAACAAAACAGGCCCGAACCTCTAGGCT
GGTTTACGACAGCCCCCAAG

Product: Rieske family iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLVTQQPVLRRFWYPVIPMSALETGPQAFTLLKTPLVLWLNESGQPCAVLDRCCHRSAQLSKGVVCNGHIRCPYHGWEFD
GSGTCVKVPQLTDNFIPPTYKVEGFRCQERYGYVWVALADPLTDIPEIPEVADSRFRQIHQFYEVWKCAGLRLMENSFDN
AHLHFVHHQSFGVISEPVPPDLDSLEELEYGLRATSVLPVFNSDLQKQNLRMSEDRTVRILEGTWFMPFGRKLKITYPNG
LIHIIFTAATPIDDQTSQVVQFCLRNDSEAEVSGKLPDSDR

Sequences:

>Translated_281_residues
MLVTQQPVLRRFWYPVIPMSALETGPQAFTLLKTPLVLWLNESGQPCAVLDRCCHRSAQLSKGVVCNGHIRCPYHGWEFD
GSGTCVKVPQLTDNFIPPTYKVEGFRCQERYGYVWVALADPLTDIPEIPEVADSRFRQIHQFYEVWKCAGLRLMENSFDN
AHLHFVHHQSFGVISEPVPPDLDSLEELEYGLRATSVLPVFNSDLQKQNLRMSEDRTVRILEGTWFMPFGRKLKITYPNG
LIHIIFTAATPIDDQTSQVVQFCLRNDSEAEVSGKLPDSDR
>Mature_281_residues
MLVTQQPVLRRFWYPVIPMSALETGPQAFTLLKTPLVLWLNESGQPCAVLDRCCHRSAQLSKGVVCNGHIRCPYHGWEFD
GSGTCVKVPQLTDNFIPPTYKVEGFRCQERYGYVWVALADPLTDIPEIPEVADSRFRQIHQFYEVWKCAGLRLMENSFDN
AHLHFVHHQSFGVISEPVPPDLDSLEELEYGLRATSVLPVFNSDLQKQNLRMSEDRTVRILEGTWFMPFGRKLKITYPNG
LIHIIFTAATPIDDQTSQVVQFCLRNDSEAEVSGKLPDSDR

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=259, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 32054; Mature: 32054

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTQQPVLRRFWYPVIPMSALETGPQAFTLLKTPLVLWLNESGQPCAVLDRCCHRSAQL
CCCCCCHHHHHHCCCCCCHHHHHCCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH
SKGVVCNGHIRCPYHGWEFDGSGTCVKVPQLTDNFIPPTYKVEGFRCQERYGYVWVALAD
CCCCEECCEEECCCCCEEECCCCCEEECCCCCCCCCCCCEEECCEEEECCCCEEEEEECC
PLTDIPEIPEVADSRFRQIHQFYEVWKCAGLRLMENSFDNAHLHFVHHQSFGVISEPVPP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCCCCCCCC
DLDSLEELEYGLRATSVLPVFNSDLQKQNLRMSEDRTVRILEGTWFMPFGRKLKITYPNG
CHHHHHHHHHHHHHEEEEHHHCCCHHHHCCCCCCCCEEEEEECEEECCCCCEEEEECCCC
LIHIIFTAATPIDDQTSQVVQFCLRNDSEAEVSGKLPDSDR
EEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MLVTQQPVLRRFWYPVIPMSALETGPQAFTLLKTPLVLWLNESGQPCAVLDRCCHRSAQL
CCCCCCHHHHHHCCCCCCHHHHHCCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH
SKGVVCNGHIRCPYHGWEFDGSGTCVKVPQLTDNFIPPTYKVEGFRCQERYGYVWVALAD
CCCCEECCEEECCCCCEEECCCCCEEECCCCCCCCCCCCEEECCEEEECCCCEEEEEECC
PLTDIPEIPEVADSRFRQIHQFYEVWKCAGLRLMENSFDNAHLHFVHHQSFGVISEPVPP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCCCCCCCC
DLDSLEELEYGLRATSVLPVFNSDLQKQNLRMSEDRTVRILEGTWFMPFGRKLKITYPNG
CHHHHHHHHHHHHHEEEEHHHCCCHHHHCCCCCCCCEEEEEECEEECCCCCEEEEECCCC
LIHIIFTAATPIDDQTSQVVQFCLRNDSEAEVSGKLPDSDR
EEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704279 [H]