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The map label for this gene is nusG [H]

Identifier: 86608696

GI number: 86608696

Start: 1264105

End: 1264770

Strand: Direct

Name: nusG [H]

Synonym: CYB_1220

Alternate gene names: 86608696

Gene position: 1264105-1264770 (Clockwise)

Preceding gene: 86608695

Following gene: 86608697

Centisome position: 41.49

GC content: 59.01

Gene sequence:

>666_bases
ATGAGGCCAGAGCAGCAGCGAAAACGTCGTGGGGGCCGTGTGGAGCACTTTGAGCCTGCAGACGCGATCCCGGAACCGGA
CGAGGGGGAAGGTCAAGAGCGTCGTAACCTGCGCTGGTACGCCGTGCAGGTGGCTTCCGGCTGCGAGAACAAAGTGAAGA
GCACCCTGATGCAACGGGCGGCTGCTTTGGATGTGGCGGATCAAATTGTCGAGGTGGTGATCCCGAAGCGGACGGGCTTC
AAGCTGGATCGATCCGGCAAGCGCCAGGAGCAAGAGGAGAAGATTTTTCCCGGCTATGTCCTGGTGCGCATGGACATGAA
CGACGACACTTGGATGGTGGTGAAAACAACCCCCAATGTGATCAACTTTGTCGGCACCGAAGAAAAGCGGGCCTACGGTC
GCGGTCGGGGGCATGTTACACCGCGTCCCCTCAGCCAAAGCGAAGTCCAGCGCATCTTCAGCAGCGTCGAGGTGGAGGAA
GTGCCCCTCAAAATCGACATGGCCCCTGGGGATCGCATCGAGGTGCTGTCCGGCCCCTTCCAAGGTTTCTACGGCGAGGT
GGTGGAAGTCAGCCCAGAACGGGGCAAGCTCAAGGCGTTGATCTCGATTTTCGGGCGCGATACCCCGGTAGAATTAGAGT
TTGGTCAAGTGCGAAAAGAGGTGTAA

Upstream 100 bases:

>100_bases
AAGTGTTTGCTTGGGTAGCCACTCAGCTGTTCTTGTGATGTTCTGTCCTGAGGGGCAAGAGAGTCATGTTCAAGGATGGC
TACAGGGAGGATGTGAGGTG

Downstream 100 bases:

>100_bases
CTGCGTTTCATGGCTAAGAAGTTGGTGGCCGTGGTCAAGTTGGCCATTCAGGCGGGCAAGGCCACCCCCGCTCCCCCCAT
TGGCCCAGCCTTGGGTCAAC

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRPEQQRKRRGGRVEHFEPADAIPEPDEGEGQERRNLRWYAVQVASGCENKVKSTLMQRAAALDVADQIVEVVIPKRTGF
KLDRSGKRQEQEEKIFPGYVLVRMDMNDDTWMVVKTTPNVINFVGTEEKRAYGRGRGHVTPRPLSQSEVQRIFSSVEVEE
VPLKIDMAPGDRIEVLSGPFQGFYGEVVEVSPERGKLKALISIFGRDTPVELEFGQVRKEV

Sequences:

>Translated_221_residues
MRPEQQRKRRGGRVEHFEPADAIPEPDEGEGQERRNLRWYAVQVASGCENKVKSTLMQRAAALDVADQIVEVVIPKRTGF
KLDRSGKRQEQEEKIFPGYVLVRMDMNDDTWMVVKTTPNVINFVGTEEKRAYGRGRGHVTPRPLSQSEVQRIFSSVEVEE
VPLKIDMAPGDRIEVLSGPFQGFYGEVVEVSPERGKLKALISIFGRDTPVELEFGQVRKEV
>Mature_221_residues
MRPEQQRKRRGGRVEHFEPADAIPEPDEGEGQERRNLRWYAVQVASGCENKVKSTLMQRAAALDVADQIVEVVIPKRTGF
KLDRSGKRQEQEEKIFPGYVLVRMDMNDDTWMVVKTTPNVINFVGTEEKRAYGRGRGHVTPRPLSQSEVQRIFSSVEVEE
VPLKIDMAPGDRIEVLSGPFQGFYGEVVEVSPERGKLKALISIFGRDTPVELEFGQVRKEV

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=184, Percent_Identity=40.2173913043478, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 25096; Mature: 25096

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPEQQRKRRGGRVEHFEPADAIPEPDEGEGQERRNLRWYAVQVASGCENKVKSTLMQRA
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEHHCCHHHHHHHHHHHH
AALDVADQIVEVVIPKRTGFKLDRSGKRQEQEEKIFPGYVLVRMDMNDDTWMVVKTTPNV
HHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCE
INFVGTEEKRAYGRGRGHVTPRPLSQSEVQRIFSSVEVEEVPLKIDMAPGDRIEVLSGPF
EEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCEEEECCCCCEEEEECCCC
QGFYGEVVEVSPERGKLKALISIFGRDTPVELEFGQVRKEV
CCCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEHHHHHHCC
>Mature Secondary Structure
MRPEQQRKRRGGRVEHFEPADAIPEPDEGEGQERRNLRWYAVQVASGCENKVKSTLMQRA
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEHHCCHHHHHHHHHHHH
AALDVADQIVEVVIPKRTGFKLDRSGKRQEQEEKIFPGYVLVRMDMNDDTWMVVKTTPNV
HHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCE
INFVGTEEKRAYGRGRGHVTPRPLSQSEVQRIFSSVEVEEVPLKIDMAPGDRIEVLSGPF
EEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCEEEECCCCCEEEEECCCC
QGFYGEVVEVSPERGKLKALISIFGRDTPVELEFGQVRKEV
CCCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7685084; 8905231; 7505271 [H]