Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608601

Identifier: 86608601

GI number: 86608601

Start: 1160015

End: 1160992

Strand: Direct

Name: 86608601

Synonym: CYB_1123

Alternate gene names: NA

Gene position: 1160015-1160992 (Clockwise)

Preceding gene: 86608600

Following gene: 86608606

Centisome position: 38.07

GC content: 60.43

Gene sequence:

>978_bases
TTGCCTGCAAGGGCTCAGCAAATTACGGATCCCAGCCCAGCTCAAGCGGCCACCAATGTTGAACCTACCTCCCCAATCTC
GGCTTCTTTTCGCAGCCAAGATGGAGTCAGCGTGCGTCCGGAAACGGTGAGGGTTTTCCTGGATGGCCAAGACGTCACTT
CCCAGTCGGTGATTACCCGCGATTTCTTCACCTATCGCCCTGCCCAACCTCTGCCGCCGGGGCGTCGGGAAGTCTTGCTG
GAGTTCACCAATACCCAGGGGGTGACCCGCCGCGTGACTTGGAGCTTCACCGTGGGTAGCCCTGTCCGCGCTTCCATCGA
CTTAGTGGATCACAATGCCGGCAGTCGCCCTTTGGCAGCGGGAGAAATCCTGTTGGTCACCGTCAAAGGTACCCCTTCCA
GCCGGGTAACGGTTTACCTCATCCAGGATGGACGGCAAGTGCAAACCTTGCCGGCTCAGGAAGTTTCCAGCGGCACCTAT
GTAGTGAACGCCCTAATCGAGGCGAAAGATACCACCCGGGAAGGGATCGTCGTCGCCCGCCTGGAAAATGGCGGCCAAGT
GCGCTTCATGACCGCCGAACAACCGGCCCGCCTGATCGAAGGGGCCACCGGGGGCATCCAGCGGCTGACCACCCAAGAGG
TTTCCGCTACAGTCAGCGCCCCCAGCCCCCTCTTGCCTCAAATCACCAACCTGCAGGATGGGGATCGGGTTTCCGGTTCT
TCGTTTACGCTGCAGGGCACTACAGCTCCCAATGCTTCGGTGCGGGTGAATGTAACGGCTTCGACCTCTCTGGGGGGCAT
CATCAGCGCCCAACAGACCGTGACCAACCAAACGGTGCAGGCAGATGCCCAGGGCCGTTTCACCATCACCGTTCGGCCTC
CCATTCCGGCCTCTGGCACGGTGTATCAGGTGAATCTCACGGCCACTTCCGGCAACCAAACCAGCCCAACGGTAACCCTG
CGCCTTACCCAGCAGTAG

Upstream 100 bases:

>100_bases
GTAGTCTATCTTTTTCTTGGATGGTCTCATGAGCGATAACTTGTATTCCTGGTTTCCCCGGGCCTTGGTGATTGGCGCTG
CGGTTGTGGGGTTGTCGAGC

Downstream 100 bases:

>100_bases
GGGTTCAAGGGATCCCAGCCCATCCCGATAGACTTCCCCCCACCCATCAAGGGATCTGGGCAGCCTTCCATGTCCAGCAG
TTCAGACTTCCCTCTCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MPARAQQITDPSPAQAATNVEPTSPISASFRSQDGVSVRPETVRVFLDGQDVTSQSVITRDFFTYRPAQPLPPGRREVLL
EFTNTQGVTRRVTWSFTVGSPVRASIDLVDHNAGSRPLAAGEILLVTVKGTPSSRVTVYLIQDGRQVQTLPAQEVSSGTY
VVNALIEAKDTTREGIVVARLENGGQVRFMTAEQPARLIEGATGGIQRLTTQEVSATVSAPSPLLPQITNLQDGDRVSGS
SFTLQGTTAPNASVRVNVTASTSLGGIISAQQTVTNQTVQADAQGRFTITVRPPIPASGTVYQVNLTATSGNQTSPTVTL
RLTQQ

Sequences:

>Translated_325_residues
MPARAQQITDPSPAQAATNVEPTSPISASFRSQDGVSVRPETVRVFLDGQDVTSQSVITRDFFTYRPAQPLPPGRREVLL
EFTNTQGVTRRVTWSFTVGSPVRASIDLVDHNAGSRPLAAGEILLVTVKGTPSSRVTVYLIQDGRQVQTLPAQEVSSGTY
VVNALIEAKDTTREGIVVARLENGGQVRFMTAEQPARLIEGATGGIQRLTTQEVSATVSAPSPLLPQITNLQDGDRVSGS
SFTLQGTTAPNASVRVNVTASTSLGGIISAQQTVTNQTVQADAQGRFTITVRPPIPASGTVYQVNLTATSGNQTSPTVTL
RLTQQ
>Mature_324_residues
PARAQQITDPSPAQAATNVEPTSPISASFRSQDGVSVRPETVRVFLDGQDVTSQSVITRDFFTYRPAQPLPPGRREVLLE
FTNTQGVTRRVTWSFTVGSPVRASIDLVDHNAGSRPLAAGEILLVTVKGTPSSRVTVYLIQDGRQVQTLPAQEVSSGTYV
VNALIEAKDTTREGIVVARLENGGQVRFMTAEQPARLIEGATGGIQRLTTQEVSATVSAPSPLLPQITNLQDGDRVSGSS
FTLQGTTAPNASVRVNVTASTSLGGIISAQQTVTNQTVQADAQGRFTITVRPPIPASGTVYQVNLTATSGNQTSPTVTLR
LTQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34480; Mature: 34349

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARAQQITDPSPAQAATNVEPTSPISASFRSQDGVSVRPETVRVFLDGQDVTSQSVITR
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCEEEE
DFFTYRPAQPLPPGRREVLLEFTNTQGVTRRVTWSFTVGSPVRASIDLVDHNAGSRPLAA
HHEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCEEC
GEILLVTVKGTPSSRVTVYLIQDGRQVQTLPAQEVSSGTYVVNALIEAKDTTREGIVVAR
CCEEEEEEECCCCCCEEEEEEECCCEEEECCHHHCCCCEEEEEEEEECCCCCCCCEEEEE
LENGGQVRFMTAEQPARLIEGATGGIQRLTTQEVSATVSAPSPLLPQITNLQDGDRVSGS
ECCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCHHCCCCCCCCCCCC
SFTLQGTTAPNASVRVNVTASTSLGGIISAQQTVTNQTVQADAQGRFTITVRPPIPASGT
EEEEEECCCCCCEEEEEEEECCCCCCEEECCHHHCCCEEEECCCCEEEEEECCCCCCCCE
VYQVNLTATSGNQTSPTVTLRLTQQ
EEEEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure 
PARAQQITDPSPAQAATNVEPTSPISASFRSQDGVSVRPETVRVFLDGQDVTSQSVITR
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCEEEE
DFFTYRPAQPLPPGRREVLLEFTNTQGVTRRVTWSFTVGSPVRASIDLVDHNAGSRPLAA
HHEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCEEC
GEILLVTVKGTPSSRVTVYLIQDGRQVQTLPAQEVSSGTYVVNALIEAKDTTREGIVVAR
CCEEEEEEECCCCCCEEEEEEECCCEEEECCHHHCCCCEEEEEEEEECCCCCCCCEEEEE
LENGGQVRFMTAEQPARLIEGATGGIQRLTTQEVSATVSAPSPLLPQITNLQDGDRVSGS
ECCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCHHCCCCCCCCCCCC
SFTLQGTTAPNASVRVNVTASTSLGGIISAQQTVTNQTVQADAQGRFTITVRPPIPASGT
EEEEEECCCCCCEEEEEEEECCCCCCEEECCHHHCCCEEEECCCCEEEEEECCCCCCCCE
VYQVNLTATSGNQTSPTVTLRLTQQ
EEEEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA