| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608576
Identifier: 86608576
GI number: 86608576
Start: 1132452
End: 1133432
Strand: Direct
Name: 86608576
Synonym: CYB_1098
Alternate gene names: NA
Gene position: 1132452-1133432 (Clockwise)
Preceding gene: 86608571
Following gene: 86608577
Centisome position: 37.17
GC content: 61.77
Gene sequence:
>981_bases GTGCCCTACCAACAGCGGGCAGCAGAAGCCGAGCTCTGGGCCAAGGAGCAAGGGATCCCGCCGGCAGAGGCGGATCGGGT GCGGGTGGGCTTGCTGCTCATTGATGTGCAGAACACCTTTTGCATTCCCGGCTTTGAGTTGTTTGTGGCCGGTTCCGGCG GATTGGGAGCGGTGGAAGACAATCGACGGCTTTGTCAGTTCATCTACCGCAATTTGGCTTGCCTCACCCAGATCATTGCC ACTCTCGACACCCACACGGCCATGCAGATCTTCCACCCCGTCTTTTGGGTGGACGCGCAGGGAGCCCATCCTGAGCCGGC CACGGCCATTTCGGCAGCCGATATCCGCTGCGGACGCTGGCGGGTTAACCCCGCCATGGCTGCCAACCTCACCCAGGGGG ATCTGACGCGGTTGCAGGTCTACGCTCTGCACTACGCCGAGCAGTTGGAGCAGGGGGGAAAATATCCCCTCATCGTCTGG CCCTACCACTCCATGCTGGGGGGGATTGGCCATGCCCTGGTGCCAGCGGTGGAGGAGGCGATTTTCTTTCACGGCATGGC CCGCTGCAGCCAGCCCAGCCTGCAGCTCAAGGGAGCCAATCCCTTGACGGAAAATTATTCCGTGCTTAGCCCGGAGGTTT TGACTGGGCCGGAAGGGGATCCCATCGACGAGAAAAATGAGCTCCTCATCCACCACCTGCTGCAGTTTGACGCCCTGATC GTGGCTGGCCAAGCCAAAAGCCACTGCGTGGCCTGGACGGTGAGCGACCTGCTGCAAGAGATCCAGGCCACGGATCCCAG CTTGGCCAAGAAAGTCTACCTTCTGGAGGACTGCACCTCGGCGGTGGTGATCCCCGGCGTTGTGGATTTCAGCGAACAGG CGGAGGCCGCTTTCGCCCGCTTTGCGGAAGCAGGAATGCACCGAGTGCGCTCCACGGATCCCATCTGGGAGTGGCCTGAG TTTCCCCGGGATCCCAGCTGA
Upstream 100 bases:
>100_bases GAAGAACGCCATGAATACCACTCTACAGGAGCTAACTGTTAAGGCTCCAGCGGGCCTTCCCCCCCACTTTGATCCGGAGC GGGTGGGAGAGATTTGGCGC
Downstream 100 bases:
>100_bases CCTCCAACATCCGGTATGATGCAGCAGGATCCTCTGCTGGAGCAGCCCTGTGTACGGTCGCGGTAGCGGTGCGGAGCACT CTCGCGGTAGCGGTGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPYQQRAAEAELWAKEQGIPPAEADRVRVGLLLIDVQNTFCIPGFELFVAGSGGLGAVEDNRRLCQFIYRNLACLTQIIA TLDTHTAMQIFHPVFWVDAQGAHPEPATAISAADIRCGRWRVNPAMAANLTQGDLTRLQVYALHYAEQLEQGGKYPLIVW PYHSMLGGIGHALVPAVEEAIFFHGMARCSQPSLQLKGANPLTENYSVLSPEVLTGPEGDPIDEKNELLIHHLLQFDALI VAGQAKSHCVAWTVSDLLQEIQATDPSLAKKVYLLEDCTSAVVIPGVVDFSEQAEAAFARFAEAGMHRVRSTDPIWEWPE FPRDPS
Sequences:
>Translated_326_residues MPYQQRAAEAELWAKEQGIPPAEADRVRVGLLLIDVQNTFCIPGFELFVAGSGGLGAVEDNRRLCQFIYRNLACLTQIIA TLDTHTAMQIFHPVFWVDAQGAHPEPATAISAADIRCGRWRVNPAMAANLTQGDLTRLQVYALHYAEQLEQGGKYPLIVW PYHSMLGGIGHALVPAVEEAIFFHGMARCSQPSLQLKGANPLTENYSVLSPEVLTGPEGDPIDEKNELLIHHLLQFDALI VAGQAKSHCVAWTVSDLLQEIQATDPSLAKKVYLLEDCTSAVVIPGVVDFSEQAEAAFARFAEAGMHRVRSTDPIWEWPE FPRDPS >Mature_325_residues PYQQRAAEAELWAKEQGIPPAEADRVRVGLLLIDVQNTFCIPGFELFVAGSGGLGAVEDNRRLCQFIYRNLACLTQIIAT LDTHTAMQIFHPVFWVDAQGAHPEPATAISAADIRCGRWRVNPAMAANLTQGDLTRLQVYALHYAEQLEQGGKYPLIVWP YHSMLGGIGHALVPAVEEAIFFHGMARCSQPSLQLKGANPLTENYSVLSPEVLTGPEGDPIDEKNELLIHHLLQFDALIV AGQAKSHCVAWTVSDLLQEIQATDPSLAKKVYLLEDCTSAVVIPGVVDFSEQAEAAFARFAEAGMHRVRSTDPIWEWPEF PRDPS
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35877; Mature: 35746
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYQQRAAEAELWAKEQGIPPAEADRVRVGLLLIDVQNTFCIPGFELFVAGSGGLGAVED CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEECCCEEEEEECCCCCCCCCC NRRLCQFIYRNLACLTQIIATLDTHTAMQIFHPVFWVDAQGAHPEPATAISAADIRCGRW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHEECCCCCCCCE RVNPAMAANLTQGDLTRLQVYALHYAEQLEQGGKYPLIVWPYHSMLGGIGHALVPAVEEA ECCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHH IFFHGMARCSQPSLQLKGANPLTENYSVLSPEVLTGPEGDPIDEKNELLIHHLLQFDALI HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHEE VAGQAKSHCVAWTVSDLLQEIQATDPSLAKKVYLLEDCTSAVVIPGVVDFSEQAEAAFAR EECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH FAEAGMHRVRSTDPIWEWPEFPRDPS HHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PYQQRAAEAELWAKEQGIPPAEADRVRVGLLLIDVQNTFCIPGFELFVAGSGGLGAVED CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEECCCEEEEEECCCCCCCCCC NRRLCQFIYRNLACLTQIIATLDTHTAMQIFHPVFWVDAQGAHPEPATAISAADIRCGRW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHEECCCCCCCCE RVNPAMAANLTQGDLTRLQVYALHYAEQLEQGGKYPLIVWPYHSMLGGIGHALVPAVEEA ECCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHH IFFHGMARCSQPSLQLKGANPLTENYSVLSPEVLTGPEGDPIDEKNELLIHHLLQFDALI HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHEE VAGQAKSHCVAWTVSDLLQEIQATDPSLAKKVYLLEDCTSAVVIPGVVDFSEQAEAAFAR EECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH FAEAGMHRVRSTDPIWEWPEFPRDPS HHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA