| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608227
Identifier: 86608227
GI number: 86608227
Start: 767236
End: 767994
Strand: Reverse
Name: 86608227
Synonym: CYB_0743
Alternate gene names: NA
Gene position: 767994-767236 (Counterclockwise)
Preceding gene: 86608228
Following gene: 86608226
Centisome position: 25.21
GC content: 58.37
Gene sequence:
>759_bases ATGAACTCTATGGAACAGATCATCCGACGTAGCCAAGTGGTGGGCCTGCTGGCCCTCGATGGCAGCACTGCTACCGCATT GGGTACCGTAGAAGAAATCTGGGTTGACCCAACAGGGCGGGTATGCTACTTCACCAGCCAGCAGGGGTACACCCCCCTGG AGCAGATTTCTCTCATCGGGCCAGACGCGCTGCTGACCTACTCTACCGTTTTTGCTACCCCCCTAACCCCCATCAGCTCT CTTTACCGTCGCACAGTGCGCATTGGGAATCGAGAGGTCGGCTGGATTGAGGATTTTCTCTTTGACTGGGAGACTGGAGC GATTGCCGCTTATATTCTGGGTGGCAGCATTGCCGAGCCTTGGGGGGGGCGGGCTGTTCTCCTGCCTGAGGACGTGGAAG CCATTGATGTGGACGCGGTGGTGGTTAAGGAGGATGCTCCGCAACGGCTGAAATCGGAAGCGGAAGGCTTAAAGAACTTT TGGAGCGAAAAATCTCGGCAGGTGAAACAGCTTATCCAGCGCATGGGGGATCGCCTCAAGGCGTTGGTTGGCCCACAGGA TCCGCCGGAGGTGGTGCGCGTTAAGGTGAAGCAGGTGCGGGACGAGCTGGCCAAAGGGGGCAAGTTCGATCTCTCCCTAC TGGACGAGGCGGCAGAGTTTCTGCAACACAAGTGGGAAACCTGGCAACATCGCCTCAGCCGCGCCGCTCAGCGCATGCAG GCTGCCCTTCAGGCTGCTTGGGAGAAGCTGACCGAATAG
Upstream 100 bases:
>100_bases CTTGGACATGGCTCAGGAAATTGCCCGGCTCAGGGGGCAACTGCGCCACTACCGCGGATTTTGAGGCTGCCCAGCTAACC CATCAAGGAGATAAACTTCG
Downstream 100 bases:
>100_bases CAAAGAATGACTCTGCAACCTCTGGCCTGCGGTCGCCTCAGATGCTGCACATTTGCTTCCCAACTGCTTCCCAACTCCCC TCTTCCTCTGGGAAAGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNSMEQIIRRSQVVGLLALDGSTATALGTVEEIWVDPTGRVCYFTSQQGYTPLEQISLIGPDALLTYSTVFATPLTPISS LYRRTVRIGNREVGWIEDFLFDWETGAIAAYILGGSIAEPWGGRAVLLPEDVEAIDVDAVVVKEDAPQRLKSEAEGLKNF WSEKSRQVKQLIQRMGDRLKALVGPQDPPEVVRVKVKQVRDELAKGGKFDLSLLDEAAEFLQHKWETWQHRLSRAAQRMQ AALQAAWEKLTE
Sequences:
>Translated_252_residues MNSMEQIIRRSQVVGLLALDGSTATALGTVEEIWVDPTGRVCYFTSQQGYTPLEQISLIGPDALLTYSTVFATPLTPISS LYRRTVRIGNREVGWIEDFLFDWETGAIAAYILGGSIAEPWGGRAVLLPEDVEAIDVDAVVVKEDAPQRLKSEAEGLKNF WSEKSRQVKQLIQRMGDRLKALVGPQDPPEVVRVKVKQVRDELAKGGKFDLSLLDEAAEFLQHKWETWQHRLSRAAQRMQ AALQAAWEKLTE >Mature_252_residues MNSMEQIIRRSQVVGLLALDGSTATALGTVEEIWVDPTGRVCYFTSQQGYTPLEQISLIGPDALLTYSTVFATPLTPISS LYRRTVRIGNREVGWIEDFLFDWETGAIAAYILGGSIAEPWGGRAVLLPEDVEAIDVDAVVVKEDAPQRLKSEAEGLKNF WSEKSRQVKQLIQRMGDRLKALVGPQDPPEVVRVKVKQVRDELAKGGKFDLSLLDEAAEFLQHKWETWQHRLSRAAQRMQ AALQAAWEKLTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28209; Mature: 28209
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSMEQIIRRSQVVGLLALDGSTATALGTVEEIWVDPTGRVCYFTSQQGYTPLEQISLIG CCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHCC PDALLTYSTVFATPLTPISSLYRRTVRIGNREVGWIEDFLFDWETGAIAAYILGGSIAEP CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCC WGGRAVLLPEDVEAIDVDAVVVKEDAPQRLKSEAEGLKNFWSEKSRQVKQLIQRMGDRLK CCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVGPQDPPEVVRVKVKQVRDELAKGGKFDLSLLDEAAEFLQHKWETWQHRLSRAAQRMQ HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALQAAWEKLTE HHHHHHHHHHCC >Mature Secondary Structure MNSMEQIIRRSQVVGLLALDGSTATALGTVEEIWVDPTGRVCYFTSQQGYTPLEQISLIG CCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHCC PDALLTYSTVFATPLTPISSLYRRTVRIGNREVGWIEDFLFDWETGAIAAYILGGSIAEP CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCC WGGRAVLLPEDVEAIDVDAVVVKEDAPQRLKSEAEGLKNFWSEKSRQVKQLIQRMGDRLK CCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVGPQDPPEVVRVKVKQVRDELAKGGKFDLSLLDEAAEFLQHKWETWQHRLSRAAQRMQ HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALQAAWEKLTE HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA