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The map label for this gene is chlD [H]

Identifier: 86608199

GI number: 86608199

Start: 730250

End: 732268

Strand: Reverse

Name: chlD [H]

Synonym: CYB_0714

Alternate gene names: 86608199

Gene position: 732268-730250 (Counterclockwise)

Preceding gene: 86608200

Following gene: 86608198

Centisome position: 24.03

GC content: 65.33

Gene sequence:

>2019_bases
ATGGGATCCGCAACTCTATCCGCTCCTTGTACCTTTCCCCTCACCGCTGTAGTGGGGCAACAGGCGGCCAAGCTGGCTCT
GCTGCTGGCAGCAGTGGATCCCAGCCTAAGGGGTGTGGTGCTGGTGGGGCCTCGCGGCACCGCCAAGTCGGTTTTGGCCA
GAGGGATCCACGCCTTGCTACCGCCCATCGAGGTGATTGCGGGATCCTATTGCAACGACGATCCAGCGCAGCCGGATACC
TGGTCCGACTGGGCCAAGGCTCGCTACCCAGCCGGAGAGGTGCCGCCCACCCAAGTGATATCGCCCCCCTTTGTCCAGGT
TCCCCTGGGCGTCACCGAAGATCGGCTGCTGGGATCCGTCGATGTGGAGGCCTCCATCAGGCAGGGGGAAACGGTCTTCC
AGCCAGGGCTCTTGGCTGCTGCCCACCGGGGCGTGCTCTATATGGATGACATCAACCTCTTGGACGACGCCATCGTCAAC
TTGTTGCTGACGGTGGTGGGGGATGGGGTCAACCGCCTGGAACGAGAGGGGCTGAGTCTGCAACACCCCTGCCGGCCTCT
CTTGGTGGCCACCTACAACCCCGAAGAGGGATCCCTGCGCCCCCACCTGCTGGATCGCCTGGCACTGGTGGTGCCGGTGG
GGCAGGAGCTGAGCCTAGAAGAGCGAGGGGAAATTGTCCAACGGGCAACGCAATTTGTCGATGCTCCCGAGCCCTTCCTG
GCCGAGCACCAGGCGGAACTGGAGGAAATCCGCACCCGCATCCTCCTGGCGCGGGAGTGGCTGCCCCAGGTCAAGCCGCA
GCGGGAACAGCTCCTCTACCTGGTGCAGGAGGCCATCCGCGGCAACGTCCAAGGGCACCGGGGAGAACAATTTGCCCTGC
GAGCCGCCTGTGCCCTGGCAGCTCTGGAAGGACGGGATCGCCTGTTGGCCGAGGATCTGCAGCAGGCTGTGCAACTGGTG
CTGCTGCCCCGCGCCCAATACGACCCCGACCAGCCCCCCCCTCCCCCCCCGCCACCATCCCAACAGTCGGATCCCCCGCC
GCCGGATCCCGACAAGGATGGGGAAGATAGAGAGGAAACGGATCCCCAGCCGGAAAACCTGAGTCTGCCGGAAGAGTTTT
TCTTCGAGCCGGAGCGCATTGCCCTCGACCCGCGCCTGCTGGCCTTCGCCCAGTCCCTCAACCAGCAGGGAAAAACGGGA
TCCCGCAGCCTGGTGTTCAGCGCCGACCGAGGCCGCTACGTCAAGCCCATCCTGCCCCAGGGATCCAACCCCCGCGTTGC
CGTCGATGCCACCTTGCGAGCTGCTGCCCCCTATCAGAAAAGCCGCCGCCAGCGGCAACCGGGACGTAGCGTGATTGTGG
AGCCGAGCGATATCCGCGCCAAAAAGCTGGTTCGCAAGGCCGGAGCCCTGGTGATCTTTGTGGTGGACGCCTCCGGCTCC
ATGGCCCTCAACCGCATGCAAGCGGCCAAAGGTGCCGCCCTGCGCCTGCTCACCGAGGCTTACCAAAACCGTGACAAGGT
GGCCCTCATCGCCTTTCGTGGGGAAACTGCCGAAGTGTTGCTCCCCCCCACCCGCTCCATTGAGCTGGCCCGCCGCCGTT
TGGAATCTCTGCCCTGCGGCGGGGGATCCCCTCTTGCCCATGCCCTCACCCAAGCCGTGCGGATGGGAGTCAATGCCCGT
GCTGCCGGCGACGTGGGCCAGGTGATGCTGGTGGCTCTCACCGATGGCCGGGCCAACATTCCCCTCAGCCGCTCCTTGGG
ACGGAGCGACAGCAAAAGCCAGTTGGGAGCGGCTCCCATCGACCTCAAGCAAGAGCTGCGGGAGATCGCCCTGCGCATCC
GCGCCCTGGGGTTGAAGCTGCTCTTGATCGACTCCCAAAGCCGCTTTGTAACCACCGGCTTCAGCGCCGAGCTGGCGGAA
TTGGCGGGCGGACGGTACTTTCATCTGCCCCGTGCCACCGACCAGGGGATCGCAGCCGTGGCCCGCTCGGCTATGCAGGA
GGGACGCACCTACCCCTGA

Upstream 100 bases:

>100_bases
GCGGTGCGGAGCACTCAAGCGATAGACTGGGGTGTACAGCTCCCGCTCCGCTGCGAATCTGCTCGATTGAACCGTTGCTC
GCCAAGCCTACCCGCCAACC

Downstream 100 bases:

>100_bases
GAGAACAGCCTCTCCGTTGGCAAAGGTTGTAACTTTTCTTAATGGTTGGTTATGATCCCTGTAGGCGCTCTTTACCTTTT
CCCATGGCTACAGGACTCCT

Product: magnesium chelatase, ATPase subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MGSATLSAPCTFPLTAVVGQQAAKLALLLAAVDPSLRGVVLVGPRGTAKSVLARGIHALLPPIEVIAGSYCNDDPAQPDT
WSDWAKARYPAGEVPPTQVISPPFVQVPLGVTEDRLLGSVDVEASIRQGETVFQPGLLAAAHRGVLYMDDINLLDDAIVN
LLLTVVGDGVNRLEREGLSLQHPCRPLLVATYNPEEGSLRPHLLDRLALVVPVGQELSLEERGEIVQRATQFVDAPEPFL
AEHQAELEEIRTRILLAREWLPQVKPQREQLLYLVQEAIRGNVQGHRGEQFALRAACALAALEGRDRLLAEDLQQAVQLV
LLPRAQYDPDQPPPPPPPPSQQSDPPPPDPDKDGEDREETDPQPENLSLPEEFFFEPERIALDPRLLAFAQSLNQQGKTG
SRSLVFSADRGRYVKPILPQGSNPRVAVDATLRAAAPYQKSRRQRQPGRSVIVEPSDIRAKKLVRKAGALVIFVVDASGS
MALNRMQAAKGAALRLLTEAYQNRDKVALIAFRGETAEVLLPPTRSIELARRRLESLPCGGGSPLAHALTQAVRMGVNAR
AAGDVGQVMLVALTDGRANIPLSRSLGRSDSKSQLGAAPIDLKQELREIALRIRALGLKLLLIDSQSRFVTTGFSAELAE
LAGGRYFHLPRATDQGIAAVARSAMQEGRTYP

Sequences:

>Translated_672_residues
MGSATLSAPCTFPLTAVVGQQAAKLALLLAAVDPSLRGVVLVGPRGTAKSVLARGIHALLPPIEVIAGSYCNDDPAQPDT
WSDWAKARYPAGEVPPTQVISPPFVQVPLGVTEDRLLGSVDVEASIRQGETVFQPGLLAAAHRGVLYMDDINLLDDAIVN
LLLTVVGDGVNRLEREGLSLQHPCRPLLVATYNPEEGSLRPHLLDRLALVVPVGQELSLEERGEIVQRATQFVDAPEPFL
AEHQAELEEIRTRILLAREWLPQVKPQREQLLYLVQEAIRGNVQGHRGEQFALRAACALAALEGRDRLLAEDLQQAVQLV
LLPRAQYDPDQPPPPPPPPSQQSDPPPPDPDKDGEDREETDPQPENLSLPEEFFFEPERIALDPRLLAFAQSLNQQGKTG
SRSLVFSADRGRYVKPILPQGSNPRVAVDATLRAAAPYQKSRRQRQPGRSVIVEPSDIRAKKLVRKAGALVIFVVDASGS
MALNRMQAAKGAALRLLTEAYQNRDKVALIAFRGETAEVLLPPTRSIELARRRLESLPCGGGSPLAHALTQAVRMGVNAR
AAGDVGQVMLVALTDGRANIPLSRSLGRSDSKSQLGAAPIDLKQELREIALRIRALGLKLLLIDSQSRFVTTGFSAELAE
LAGGRYFHLPRATDQGIAAVARSAMQEGRTYP
>Mature_671_residues
GSATLSAPCTFPLTAVVGQQAAKLALLLAAVDPSLRGVVLVGPRGTAKSVLARGIHALLPPIEVIAGSYCNDDPAQPDTW
SDWAKARYPAGEVPPTQVISPPFVQVPLGVTEDRLLGSVDVEASIRQGETVFQPGLLAAAHRGVLYMDDINLLDDAIVNL
LLTVVGDGVNRLEREGLSLQHPCRPLLVATYNPEEGSLRPHLLDRLALVVPVGQELSLEERGEIVQRATQFVDAPEPFLA
EHQAELEEIRTRILLAREWLPQVKPQREQLLYLVQEAIRGNVQGHRGEQFALRAACALAALEGRDRLLAEDLQQAVQLVL
LPRAQYDPDQPPPPPPPPSQQSDPPPPDPDKDGEDREETDPQPENLSLPEEFFFEPERIALDPRLLAFAQSLNQQGKTGS
RSLVFSADRGRYVKPILPQGSNPRVAVDATLRAAAPYQKSRRQRQPGRSVIVEPSDIRAKKLVRKAGALVIFVVDASGSM
ALNRMQAAKGAALRLLTEAYQNRDKVALIAFRGETAEVLLPPTRSIELARRRLESLPCGGGSPLAHALTQAVRMGVNARA
AGDVGQVMLVALTDGRANIPLSRSLGRSDSKSQLGAAPIDLKQELREIALRIRALGLKLLLIDSQSRFVTTGFSAELAEL
AGGRYFHLPRATDQGIAAVARSAMQEGRTYP

Specific function: Involved in chlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011776
- InterPro:   IPR000523
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 72817; Mature: 72686

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSATLSAPCTFPLTAVVGQQAAKLALLLAAVDPSLRGVVLVGPRGTAKSVLARGIHALL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHC
PPIEVIAGSYCNDDPAQPDTWSDWAKARYPAGEVPPTQVISPPFVQVPLGVTEDRLLGSV
CCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCCC
DVEASIRQGETVFQPGLLAAAHRGVLYMDDINLLDDAIVNLLLTVVGDGVNRLEREGLSL
CCHHHHHCCCCHHCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
QHPCRPLLVATYNPEEGSLRPHLLDRLALVVPVGQELSLEERGEIVQRATQFVDAPEPFL
CCCCCCEEEEEECCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCHHH
AEHQAELEEIRTRILLAREWLPQVKPQREQLLYLVQEAIRGNVQGHRGEQFALRAACALA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALEGRDRLLAEDLQQAVQLVLLPRAQYDPDQPPPPPPPPSQQSDPPPPDPDKDGEDREET
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPQPENLSLPEEFFFEPERIALDPRLLAFAQSLNQQGKTGSRSLVFSADRGRYVKPILPQ
CCCCCCCCCCHHHCCCCHHEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCCC
GSNPRVAVDATLRAAAPYQKSRRQRQPGRSVIVEPSDIRAKKLVRKAGALVIFVVDASGS
CCCCCEEEEEHHHHCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEEEEEEECCCC
MALNRMQAAKGAALRLLTEAYQNRDKVALIAFRGETAEVLLPPTRSIELARRRLESLPCG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCC
GGSPLAHALTQAVRMGVNARAAGDVGQVMLVALTDGRANIPLSRSLGRSDSKSQLGAAPI
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHCCCCCC
DLKQELREIALRIRALGLKLLLIDSQSRFVTTGFSAELAELAGGRYFHLPRATDQGIAAV
HHHHHHHHHHHHHHHHCEEEEEEECCCCEEEECCCHHHHHHCCCCEEECCCCCCHHHHHH
ARSAMQEGRTYP
HHHHHHCCCCCC
>Mature Secondary Structure 
GSATLSAPCTFPLTAVVGQQAAKLALLLAAVDPSLRGVVLVGPRGTAKSVLARGIHALL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHC
PPIEVIAGSYCNDDPAQPDTWSDWAKARYPAGEVPPTQVISPPFVQVPLGVTEDRLLGSV
CCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCCC
DVEASIRQGETVFQPGLLAAAHRGVLYMDDINLLDDAIVNLLLTVVGDGVNRLEREGLSL
CCHHHHHCCCCHHCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
QHPCRPLLVATYNPEEGSLRPHLLDRLALVVPVGQELSLEERGEIVQRATQFVDAPEPFL
CCCCCCEEEEEECCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCHHH
AEHQAELEEIRTRILLAREWLPQVKPQREQLLYLVQEAIRGNVQGHRGEQFALRAACALA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALEGRDRLLAEDLQQAVQLVLLPRAQYDPDQPPPPPPPPSQQSDPPPPDPDKDGEDREET
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPQPENLSLPEEFFFEPERIALDPRLLAFAQSLNQQGKTGSRSLVFSADRGRYVKPILPQ
CCCCCCCCCCHHHCCCCHHEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCCC
GSNPRVAVDATLRAAAPYQKSRRQRQPGRSVIVEPSDIRAKKLVRKAGALVIFVVDASGS
CCCCCEEEEEHHHHCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEEEEEEECCCC
MALNRMQAAKGAALRLLTEAYQNRDKVALIAFRGETAEVLLPPTRSIELARRRLESLPCG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCC
GGSPLAHALTQAVRMGVNARAAGDVGQVMLVALTDGRANIPLSRSLGRSDSKSQLGAAPI
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHCCCCCC
DLKQELREIALRIRALGLKLLLIDSQSRFVTTGFSAELAELAGGRYFHLPRATDQGIAAV
HHHHHHHHHHHHHHHHCEEEEEEECCCCEEEECCCHHHHHHCCCCEEECCCCCCHHHHHH
ARSAMQEGRTYP
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8663186; 8905231 [H]