Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608173

Identifier: 86608173

GI number: 86608173

Start: 702940

End: 704877

Strand: Reverse

Name: 86608173

Synonym: CYB_0687

Alternate gene names: NA

Gene position: 704877-702940 (Counterclockwise)

Preceding gene: 86608174

Following gene: 86608172

Centisome position: 23.14

GC content: 61.51

Gene sequence:

>1938_bases
GTGACGCAGAAGGCAAGACAGTGGGCTTTGTGGGTTGCCGGTTTGCTTTGGTGTTGCGGGCCGACGGCTGTCCACGCAGC
GGAAGTCATTTCTCTGCAAAGGCTGGGCTACGACCGCTCGGTGCTGCTGCAAGGAGCTAACCCGCGTCTAGATATCGGGA
TCCCTGCTCCCCTGAACGGTGTTGACCCTGAGGCCAGCTTTGTGCAGTTGCGCCTGGATCCCTCGCCGGTGCTCAAGCCC
ACGTCCACGGTGCGGGTGCTGATCAACGAGGAGCTAATGGGCCTTTTTCTGGTGCGGGACCTGCGGCAGGAGCCGGTGGT
GCGAGTGCCCATCCCCAGCTTGGCGCGGAGCGAGCGCTTCATCACCTTGTCGGTGCAGCCTTTCCTGAGCATCAGCGACG
ATATTTGCGCCGACTTGAATACCGGCAATTTGCTGCTGACGGTAGGGCGGGATAGTTTCTTTGAGCTGGCGCCCCTCGTT
CCTGATGCCACGGTGGCCGGTTTTCTGGGCCGGCTGTATCCTCAGGTTACTTTGGTAGTGCCGGCTGACCTCACTCCTGA
AGCGGCGGAAGCAGCTCTGTGGCTGTACAGCCTCCTTTCTCACCTGTTTCCGCAAACGCCCATCCTGTGGAGCAACCGTC
CGAAGCAGGGGGCACAGGTGATCTTAGAGCCGGCCAATTTCACCCCCCACTTGCAGCATCAAATTACCCCAGAGGGATCC
CGCCTGCGAGTGGCCGCCCGCCGGGAAGCTATTCTTGCTCTCTATGAAGAATGGAAGCGGGCGGGGCTGGTCAGCCGCGG
CATCCAGGTGACAAGGGTGGCGGATCTGGAGAGAGCGCTCAGGGCCAACCGCCTTAGCTTGCGGGAGTTGGGTATTGTGG
ATCCGCTGCTGCGGGGGTTTGGCAGCCAGTCTTTGGTCTTCAACTTCAACCTGTCCCAATTGGGGGGACGACCGCGGGAT
CTGGCGGCGCAACTGGATGTGATCATGAACCCGGTGGATGGCCGGGTGGGGGATCGTCTCACCGGCTACGTGTTCTTGAA
TGGCGTTCTGTTGCGCACCTACAACCTAACCGGGCGCACCCAGCTCAACGAAACTGTGACCCTGCCCACCCGCCTGCTGC
GCCGCTTTAATCAACTGGAGCTCCGCTTTGACTATGGCGCCAGCCCCGGTAATTGCCAGGGATCCCTGACCCCGCTGACT
TTGCAAGTGCGCTCGGATAGCTCTGGCTTTATCTGGAGCGGCTACCAAGCCCCCACTGGCGAGCTGCAGGAGATCCCGGC
GGTGCTTCGAGGATCCGGCCAAGTGTGGGTAGGGGATCCCCAACTGCTGCCGGCTGCCGCCTACCTGGTCGGTGCCCTCA
GCCGGCTGGCTGCCCGACCCCTGCTGCCCACCCTTGAGGTTTTGCCCAAAGAGGAAGCCAACCTGGAGACGGGGAACTTT
GCCTGGCAGGTGATCGTGGCTGGGCCAGATCAGGTGGAGCTTAATAGCCCCATCCGGCTGGGATCCCAGTTTGAAATCAT
CAATCCCCTCAACCGGCAGGTGGCCTTGGCCGCTCAGCCTCAAGAAAACCTCGGCCTTTTGCAGTACTTTCTCCTGAAAG
GTAAGCCGAACCTTTGGCTTTCCTGGTGGGGATCTGACCCGGCTTTGGCAGAGCGCCTCAGCCGCGGCCTTGCCGATCCG
CGCACCCGCCTGGCCAACCAGCTACAGGGAAACGTGCTCACCGCCTATGCCGCTGCCCCCGATCTCACCCAAGTACAGAG
CTGGGATCTCACGCCGGCAGGCTATCGAGTGCGCTACCCCGGTCGCTTCAGTTGGCAGCTTTTGTTGTGGCAATACCGCT
ATTGGTTAGTGCTGCTGCTGGCCCTTTTGCTGGCAGTAGGAGCCTGGAATACCTACCAACGCTTGGCCCGCCGCCCTGAG
TCGCCCACCCTTTCCTAG

Upstream 100 bases:

>100_bases
GAAAGCTTACAGATTTCTGCATGTTGGGCAAACTTGGGTCAGGTGGGCCAAGGGGCTTGCCTGCCTCAAACAAGTTGGGG
ATCAACAAGAGGGGGTCAAG

Downstream 100 bases:

>100_bases
GGGGGTTGGCAGAGGACTTCCGGTTAAACCAGACTTGAGCCAAGCAAGGACTCCGTCCCACTTGCGCGAATAGGGTTTCC
AGCCATGCTCCAGTCCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MTQKARQWALWVAGLLWCCGPTAVHAAEVISLQRLGYDRSVLLQGANPRLDIGIPAPLNGVDPEASFVQLRLDPSPVLKP
TSTVRVLINEELMGLFLVRDLRQEPVVRVPIPSLARSERFITLSVQPFLSISDDICADLNTGNLLLTVGRDSFFELAPLV
PDATVAGFLGRLYPQVTLVVPADLTPEAAEAALWLYSLLSHLFPQTPILWSNRPKQGAQVILEPANFTPHLQHQITPEGS
RLRVAARREAILALYEEWKRAGLVSRGIQVTRVADLERALRANRLSLRELGIVDPLLRGFGSQSLVFNFNLSQLGGRPRD
LAAQLDVIMNPVDGRVGDRLTGYVFLNGVLLRTYNLTGRTQLNETVTLPTRLLRRFNQLELRFDYGASPGNCQGSLTPLT
LQVRSDSSGFIWSGYQAPTGELQEIPAVLRGSGQVWVGDPQLLPAAAYLVGALSRLAARPLLPTLEVLPKEEANLETGNF
AWQVIVAGPDQVELNSPIRLGSQFEIINPLNRQVALAAQPQENLGLLQYFLLKGKPNLWLSWWGSDPALAERLSRGLADP
RTRLANQLQGNVLTAYAAAPDLTQVQSWDLTPAGYRVRYPGRFSWQLLLWQYRYWLVLLLALLLAVGAWNTYQRLARRPE
SPTLS

Sequences:

>Translated_645_residues
MTQKARQWALWVAGLLWCCGPTAVHAAEVISLQRLGYDRSVLLQGANPRLDIGIPAPLNGVDPEASFVQLRLDPSPVLKP
TSTVRVLINEELMGLFLVRDLRQEPVVRVPIPSLARSERFITLSVQPFLSISDDICADLNTGNLLLTVGRDSFFELAPLV
PDATVAGFLGRLYPQVTLVVPADLTPEAAEAALWLYSLLSHLFPQTPILWSNRPKQGAQVILEPANFTPHLQHQITPEGS
RLRVAARREAILALYEEWKRAGLVSRGIQVTRVADLERALRANRLSLRELGIVDPLLRGFGSQSLVFNFNLSQLGGRPRD
LAAQLDVIMNPVDGRVGDRLTGYVFLNGVLLRTYNLTGRTQLNETVTLPTRLLRRFNQLELRFDYGASPGNCQGSLTPLT
LQVRSDSSGFIWSGYQAPTGELQEIPAVLRGSGQVWVGDPQLLPAAAYLVGALSRLAARPLLPTLEVLPKEEANLETGNF
AWQVIVAGPDQVELNSPIRLGSQFEIINPLNRQVALAAQPQENLGLLQYFLLKGKPNLWLSWWGSDPALAERLSRGLADP
RTRLANQLQGNVLTAYAAAPDLTQVQSWDLTPAGYRVRYPGRFSWQLLLWQYRYWLVLLLALLLAVGAWNTYQRLARRPE
SPTLS
>Mature_644_residues
TQKARQWALWVAGLLWCCGPTAVHAAEVISLQRLGYDRSVLLQGANPRLDIGIPAPLNGVDPEASFVQLRLDPSPVLKPT
STVRVLINEELMGLFLVRDLRQEPVVRVPIPSLARSERFITLSVQPFLSISDDICADLNTGNLLLTVGRDSFFELAPLVP
DATVAGFLGRLYPQVTLVVPADLTPEAAEAALWLYSLLSHLFPQTPILWSNRPKQGAQVILEPANFTPHLQHQITPEGSR
LRVAARREAILALYEEWKRAGLVSRGIQVTRVADLERALRANRLSLRELGIVDPLLRGFGSQSLVFNFNLSQLGGRPRDL
AAQLDVIMNPVDGRVGDRLTGYVFLNGVLLRTYNLTGRTQLNETVTLPTRLLRRFNQLELRFDYGASPGNCQGSLTPLTL
QVRSDSSGFIWSGYQAPTGELQEIPAVLRGSGQVWVGDPQLLPAAAYLVGALSRLAARPLLPTLEVLPKEEANLETGNFA
WQVIVAGPDQVELNSPIRLGSQFEIINPLNRQVALAAQPQENLGLLQYFLLKGKPNLWLSWWGSDPALAERLSRGLADPR
TRLANQLQGNVLTAYAAAPDLTQVQSWDLTPAGYRVRYPGRFSWQLLLWQYRYWLVLLLALLLAVGAWNTYQRLARRPES
PTLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71486; Mature: 71355

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKARQWALWVAGLLWCCGPTAVHAAEVISLQRLGYDRSVLLQGANPRLDIGIPAPLNG
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCC
VDPEASFVQLRLDPSPVLKPTSTVRVLINEELMGLFLVRDLRQEPVVRVPIPSLARSERF
CCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCEEEECCCCHHCCCEE
ITLSVQPFLSISDDICADLNTGNLLLTVGRDSFFELAPLVPDATVAGFLGRLYPQVTLVV
EEEEECCCCCCCCHHHCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCEEEEEE
PADLTPEAAEAALWLYSLLSHLFPQTPILWSNRPKQGAQVILEPANFTPHLQHQITPEGS
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEECCCCC
RLRVAARREAILALYEEWKRAGLVSRGIQVTRVADLERALRANRLSLRELGIVDPLLRGF
EEEEHHHHHHHHHHHHHHHHCCHHHCCEEEEEHHHHHHHHHHCCCHHHHHCCHHHHHHCC
GSQSLVFNFNLSQLGGRPRDLAAQLDVIMNPVDGRVGDRLTGYVFLNGVLLRTYNLTGRT
CCCEEEEEECHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECEEEEEEEECCCCC
QLNETVTLPTRLLRRFNQLELRFDYGASPGNCQGSLTPLTLQVRSDSSGFIWSGYQAPTG
CCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCC
ELQEIPAVLRGSGQVWVGDPQLLPAAAYLVGALSRLAARPLLPTLEVLPKEEANLETGNF
HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCE
AWQVIVAGPDQVELNSPIRLGSQFEIINPLNRQVALAAQPQENLGLLQYFLLKGKPNLWL
EEEEEEECCCCEECCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEE
SWWGSDPALAERLSRGLADPRTRLANQLQGNVLTAYAAAPDLTQVQSWDLTPAGYRVRYP
EEECCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCHHCCCCCCCCCCEEEECC
GRFSWQLLLWQYRYWLVLLLALLLAVGAWNTYQRLARRPESPTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TQKARQWALWVAGLLWCCGPTAVHAAEVISLQRLGYDRSVLLQGANPRLDIGIPAPLNG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCC
VDPEASFVQLRLDPSPVLKPTSTVRVLINEELMGLFLVRDLRQEPVVRVPIPSLARSERF
CCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCEEEECCCCHHCCCEE
ITLSVQPFLSISDDICADLNTGNLLLTVGRDSFFELAPLVPDATVAGFLGRLYPQVTLVV
EEEEECCCCCCCCHHHCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCEEEEEE
PADLTPEAAEAALWLYSLLSHLFPQTPILWSNRPKQGAQVILEPANFTPHLQHQITPEGS
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEECCCCC
RLRVAARREAILALYEEWKRAGLVSRGIQVTRVADLERALRANRLSLRELGIVDPLLRGF
EEEEHHHHHHHHHHHHHHHHCCHHHCCEEEEEHHHHHHHHHHCCCHHHHHCCHHHHHHCC
GSQSLVFNFNLSQLGGRPRDLAAQLDVIMNPVDGRVGDRLTGYVFLNGVLLRTYNLTGRT
CCCEEEEEECHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECEEEEEEEECCCCC
QLNETVTLPTRLLRRFNQLELRFDYGASPGNCQGSLTPLTLQVRSDSSGFIWSGYQAPTG
CCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCC
ELQEIPAVLRGSGQVWVGDPQLLPAAAYLVGALSRLAARPLLPTLEVLPKEEANLETGNF
HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCE
AWQVIVAGPDQVELNSPIRLGSQFEIINPLNRQVALAAQPQENLGLLQYFLLKGKPNLWL
EEEEEEECCCCEECCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEE
SWWGSDPALAERLSRGLADPRTRLANQLQGNVLTAYAAAPDLTQVQSWDLTPAGYRVRYP
EEECCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCHHCCCCCCCCCCEEEECC
GRFSWQLLLWQYRYWLVLLLALLLAVGAWNTYQRLARRPESPTLS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA