| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is proB [H]
Identifier: 86608012
GI number: 86608012
Start: 534374
End: 535513
Strand: Direct
Name: proB [H]
Synonym: CYB_0519
Alternate gene names: 86608012
Gene position: 534374-535513 (Clockwise)
Preceding gene: 86608009
Following gene: 86608014
Centisome position: 17.54
GC content: 62.37
Gene sequence:
>1140_bases ATGGCAACAACAGACGTGACGGCGATGGCAACAACAGACGTGACGGTGGTGGTGAAGATCGGCACCTCCAGCCTGACAGA TACTCAGACCGGCTTGTTGCGTCTTTCGGTGTTGGGGCCGCTGGTGGAGGTGCTGACCCACCTGCGCAGGCAGGGGTATG CGGTGATCTTGGTCTCCTCTGGGGCGGTGGGGGTGGGCTGTGCTCGCCTTGGCTGGCGGCAACGACCGACGGCTATTGCC GAGAAGCAGGCGGTGGCTGCGGTGGGACAGGGGCGGTTGATCCGCCTTTACGATGACCTCTTCTCGGCTCTGAACCAGCC AATTGCCCAAGTGCTGCTCACCCGCGGCGATCTGGTGGAGCGCAGCCGCTACGTGAACGCCAATCGCACTTTTGCCCAAC TGCTGCAGATGGGGGTTATTCCCATCGTCAATGAAAACGACACGGTGGCAGTGGAGGAGCTGAAATTCGGCGATAACGAC TCGCTTTCGGCGTTAGTGGCCAGCATGGTGCAGGCCAAGTGGCTTATCCTGCTCACCGATGTGGACAAGCTCTATTCGGC TGACCCCAACCGAGATCCCTCTGCCCAGCCCATTGAGCGGGTGTTGCCCGGGATCCCGCTACAGGTGAAGGCCGAAGCCC AGGGGAAAAGCGGCTGGGGCACCGGCGGCATGGCCACCAAACTGACCGCTGCTCAAATTGCTACAGCTGCAGGGGTAACG GTGGTGATCACCAATGGCAAACGGCCTGAGCAGATCCCGGCAATTCTGGCCGGCGAGGCCATCGGCACCCGCTTTGATCC GGCTCCTCAGCCCGCCAGCGCCCGCAAGCGATGGATTGCCTACGGCCTCATCCCCGAGGGATCTTTGACTTTGGATGAGG GGGCGGTACGAGCGGTGTGCGAGCAAGGGCGCTCGCTGTTGCCGGCAGGGATCACAGCCATTTCTGGGGAGTTTGAGGCG GGGGCTGCCGTGCGCCTGTGCGATCCCAGCGGCCAGGAGGTGGCGCGGGGCCTGGTGAACTACAGCGCCGAGGAGCTGCG GCAGATTAAGGGCAAAAAAACCGCCGAGATTCCCCGCATCCTGGGCTACGAAGGGGTTGATACTGCCGTCCACCGGGATA ACTTGGCCTTGCTCAATTGA
Upstream 100 bases:
>100_bases CGGGGCTTGCCGCGCCTTTTGGTCAATACAGCTGCGTCTTGACTCCGCTATGGTGGCGCTATGGTGAATAGAGGGGTGGG AGGATGGGTTGAGAGCGGCG
Downstream 100 bases:
>100_bases GGCCATGGGTGAGGCCATGGGGGCGAGTCCAGGCGCGGTGCTCTGCACCACTAGCACGAATGGCTACAACGGCGGGATCC CAACGCCTATTCTTCCAACT
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MATTDVTAMATTDVTVVVKIGTSSLTDTQTGLLRLSVLGPLVEVLTHLRRQGYAVILVSSGAVGVGCARLGWRQRPTAIA EKQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDLVERSRYVNANRTFAQLLQMGVIPIVNENDTVAVEELKFGDND SLSALVASMVQAKWLILLTDVDKLYSADPNRDPSAQPIERVLPGIPLQVKAEAQGKSGWGTGGMATKLTAAQIATAAGVT VVITNGKRPEQIPAILAGEAIGTRFDPAPQPASARKRWIAYGLIPEGSLTLDEGAVRAVCEQGRSLLPAGITAISGEFEA GAAVRLCDPSGQEVARGLVNYSAEELRQIKGKKTAEIPRILGYEGVDTAVHRDNLALLN
Sequences:
>Translated_379_residues MATTDVTAMATTDVTVVVKIGTSSLTDTQTGLLRLSVLGPLVEVLTHLRRQGYAVILVSSGAVGVGCARLGWRQRPTAIA EKQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDLVERSRYVNANRTFAQLLQMGVIPIVNENDTVAVEELKFGDND SLSALVASMVQAKWLILLTDVDKLYSADPNRDPSAQPIERVLPGIPLQVKAEAQGKSGWGTGGMATKLTAAQIATAAGVT VVITNGKRPEQIPAILAGEAIGTRFDPAPQPASARKRWIAYGLIPEGSLTLDEGAVRAVCEQGRSLLPAGITAISGEFEA GAAVRLCDPSGQEVARGLVNYSAEELRQIKGKKTAEIPRILGYEGVDTAVHRDNLALLN >Mature_378_residues ATTDVTAMATTDVTVVVKIGTSSLTDTQTGLLRLSVLGPLVEVLTHLRRQGYAVILVSSGAVGVGCARLGWRQRPTAIAE KQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDLVERSRYVNANRTFAQLLQMGVIPIVNENDTVAVEELKFGDNDS LSALVASMVQAKWLILLTDVDKLYSADPNRDPSAQPIERVLPGIPLQVKAEAQGKSGWGTGGMATKLTAAQIATAAGVTV VITNGKRPEQIPAILAGEAIGTRFDPAPQPASARKRWIAYGLIPEGSLTLDEGAVRAVCEQGRSLLPAGITAISGEFEAG AAVRLCDPSGQEVARGLVNYSAEELRQIKGKKTAEIPRILGYEGVDTAVHRDNLALLN
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=284, Percent_Identity=33.0985915492958, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI62912457, Length=282, Percent_Identity=32.9787234042553, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI1786437, Length=362, Percent_Identity=44.1988950276243, Blast_Score=293, Evalue=9e-81, Organism=Caenorhabditis elegans, GI17569967, Length=267, Percent_Identity=37.0786516853933, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17569969, Length=270, Percent_Identity=37.037037037037, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320506, Length=424, Percent_Identity=38.2075471698113, Blast_Score=271, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6321822, Length=426, Percent_Identity=36.150234741784, Blast_Score=250, Evalue=2e-67, Organism=Drosophila melanogaster, GI21357643, Length=290, Percent_Identity=33.7931034482759, Blast_Score=134, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 40148; Mature: 40016
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTDVTAMATTDVTVVVKIGTSSLTDTQTGLLRLSVLGPLVEVLTHLRRQGYAVILVSS CCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC GAVGVGCARLGWRQRPTAIAEKQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDLVE CCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHH RSRYVNANRTFAQLLQMGVIPIVNENDTVAVEELKFGDNDSLSALVASMVQAKWLILLTD HHHHCCCCHHHHHHHHHCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEEEEC VDKLYSADPNRDPSAQPIERVLPGIPLQVKAEAQGKSGWGTGGMATKLTAAQIATAAGVT HHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEE VVITNGKRPEQIPAILAGEAIGTRFDPAPQPASARKRWIAYGLIPEGSLTLDEGAVRAVC EEEECCCCCHHCCHHHCCCHHCCCCCCCCCCHHHHHCEEEEEECCCCCEEECHHHHHHHH EQGRSLLPAGITAISGEFEAGAAVRLCDPSGQEVARGLVNYSAEELRQIKGKKTAEIPRI HCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCHH LGYEGVDTAVHRDNLALLN HCCCCCCHHHCCCCEEECC >Mature Secondary Structure ATTDVTAMATTDVTVVVKIGTSSLTDTQTGLLRLSVLGPLVEVLTHLRRQGYAVILVSS CCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC GAVGVGCARLGWRQRPTAIAEKQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDLVE CCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHH RSRYVNANRTFAQLLQMGVIPIVNENDTVAVEELKFGDNDSLSALVASMVQAKWLILLTD HHHHCCCCHHHHHHHHHCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEEEEC VDKLYSADPNRDPSAQPIERVLPGIPLQVKAEAQGKSGWGTGGMATKLTAAQIATAAGVT HHHHHCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEE VVITNGKRPEQIPAILAGEAIGTRFDPAPQPASARKRWIAYGLIPEGSLTLDEGAVRAVC EEEECCCCCHHCCHHHCCCHHCCCCCCCCCCHHHHHCEEEEEECCCCCEEECHHHHHHHH EQGRSLLPAGITAISGEFEAGAAVRLCDPSGQEVARGLVNYSAEELRQIKGKKTAEIPRI HCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCHH LGYEGVDTAVHRDNLALLN HCCCCCCHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA