Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86607998

Identifier: 86607998

GI number: 86607998

Start: 516636

End: 516815

Strand: Direct

Name: 86607998

Synonym: CYB_0504

Alternate gene names: NA

Gene position: 516636-516815 (Clockwise)

Preceding gene: 86607994

Following gene: 86607999

Centisome position: 16.96

GC content: 56.67

Gene sequence:

>180_bases
TTGCGAGGGATCCGGAAAAAAGTCGGCAAAAAGAGCTGTGGCGAGGGGGTTTTGGGGCTGGAAAGCCTTGTGGCGCAAGG
CATCGAGGGATCCGACGAAAGAATCGGCCTTTGCGGCTTTTGGCGGATCGCTCGCGGAGGCGTTGATACCGTTTGGGTGT
TGTCTTGGAAACAAGGGTGA

Upstream 100 bases:

>100_bases
CCAAAACTGGGCTAGAAGGTGTTTCCAATTTCTAGGGATCCCCCCGAAGGGGGAACCCACCCCTATTAAACCCAAGCAGG
GCAAGGAATGCAAGACCCAT

Downstream 100 bases:

>100_bases
GTACCCGAGCCTCAACCGGAGTTTGCGGGGCTTGGCGATTGCCCAAGGCGTGCCCCCTAGCCGCGGGTGTAGCCGGCTGG
GGGATGAAAGCAGATACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MRGIRKKVGKKSCGEGVLGLESLVAQGIEGSDERIGLCGFWRIARGGVDTVWVLSWKQG

Sequences:

>Translated_59_residues
MRGIRKKVGKKSCGEGVLGLESLVAQGIEGSDERIGLCGFWRIARGGVDTVWVLSWKQG
>Mature_59_residues
MRGIRKKVGKKSCGEGVLGLESLVAQGIEGSDERIGLCGFWRIARGGVDTVWVLSWKQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6376; Mature: 6376

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIRKKVGKKSCGEGVLGLESLVAQGIEGSDERIGLCGFWRIARGGVDTVWVLSWKQG
CCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEECHHHHHHHHCCCCCEEEEEEECCC
>Mature Secondary Structure
MRGIRKKVGKKSCGEGVLGLESLVAQGIEGSDERIGLCGFWRIARGGVDTVWVLSWKQG
CCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEECHHHHHHHHCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA