Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607979

Identifier: 86607979

GI number: 86607979

Start: 498467

End: 499168

Strand: Reverse

Name: 86607979

Synonym: CYB_0485

Alternate gene names: NA

Gene position: 499168-498467 (Counterclockwise)

Preceding gene: 86607980

Following gene: 86607978

Centisome position: 16.38

GC content: 57.12

Gene sequence:

>702_bases
ATGACTGGATCGGTTGAAGGTTTTCCCGACGAACAACTGGTGGTTCCCCCGGCAGGTCCGCCGGTACTGCTGGGCGTGGA
GCTGACCCCCATTCGAATTGGTCTTTTAATCGGGATCACAGGGTTAGCCGCGGCGGGGTTTCTGGCCTTCACCCAACTTC
GCCCCTTGATCGAGGAGGTACAGGCTTTGGAAAGGGAGGTAGCCAACAAAACCACCCAGTTGCAGGACATAAAGAGCCAG
ATTGCCAGTTTGCAAGATGTGCCCAATCAGGTCGAGAGAGCTCGCGTGGAGCGGGAACAGATCAGTGCCCTGCTCTCCAC
CCCCGAGAATGCCGACACACAACTGCTGGATCTCAACCGGCTGGTGCAGGGGCAGCCCAACAGCGAGCTGCGCAGCTTTA
GCCCTTCTCCACTGACTCCAGCGTCTTCGGCCAATCCGGAAGTGCCTGGGATCATCGCTCCCGCCATCCAAGTGCAGACC
ACCCGTGTCGCTCTGCGTGGCCCCTATACGGAGCTGATCAATCTGATGGGAGATATAGAACGTCTGCGCACGCTGTTCCG
GGTGAGCAACATCAGCTTAAATCCTGTTCAAGACACAGGGGAACTGGACGCTGCTTTTGATTTGATTGCCTACATCTACA
ACAAAGACGTTCCGTTGGGCACTGCTCCTCCACCTGAAGGGCAAACGGCACCTGGTCAGTAG

Upstream 100 bases:

>100_bases
TGGGGGATCCTGACCCAGAATTTACCCGCGAGCTGGAGCAGCGGGGAGCGATAGGCTTGGTTGAAAAGATCCGCATTTTG
CGTCGAGTGGAGGCGAACTG

Downstream 100 bases:

>100_bases
CCCAGCCATGCCTTGACTCAGGGGGGGATCCTGCCAGTGCGGGATCCCCTTTGGTTTTCAGAAGACGGGAACAACCGCCG
GTTCAGCACGGATAGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTGSVEGFPDEQLVVPPAGPPVLLGVELTPIRIGLLIGITGLAAAGFLAFTQLRPLIEEVQALEREVANKTTQLQDIKSQ
IASLQDVPNQVERARVEREQISALLSTPENADTQLLDLNRLVQGQPNSELRSFSPSPLTPASSANPEVPGIIAPAIQVQT
TRVALRGPYTELINLMGDIERLRTLFRVSNISLNPVQDTGELDAAFDLIAYIYNKDVPLGTAPPPEGQTAPGQ

Sequences:

>Translated_233_residues
MTGSVEGFPDEQLVVPPAGPPVLLGVELTPIRIGLLIGITGLAAAGFLAFTQLRPLIEEVQALEREVANKTTQLQDIKSQ
IASLQDVPNQVERARVEREQISALLSTPENADTQLLDLNRLVQGQPNSELRSFSPSPLTPASSANPEVPGIIAPAIQVQT
TRVALRGPYTELINLMGDIERLRTLFRVSNISLNPVQDTGELDAAFDLIAYIYNKDVPLGTAPPPEGQTAPGQ
>Mature_232_residues
TGSVEGFPDEQLVVPPAGPPVLLGVELTPIRIGLLIGITGLAAAGFLAFTQLRPLIEEVQALEREVANKTTQLQDIKSQI
ASLQDVPNQVERARVEREQISALLSTPENADTQLLDLNRLVQGQPNSELRSFSPSPLTPASSANPEVPGIIAPAIQVQTT
RVALRGPYTELINLMGDIERLRTLFRVSNISLNPVQDTGELDAAFDLIAYIYNKDVPLGTAPPPEGQTAPGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25013; Mature: 24882

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSVEGFPDEQLVVPPAGPPVLLGVELTPIRIGLLIGITGLAAAGFLAFTQLRPLIEEV
CCCCCCCCCCCCEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALEREVANKTTQLQDIKSQIASLQDVPNQVERARVEREQISALLSTPENADTQLLDLNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVQGQPNSELRSFSPSPLTPASSANPEVPGIIAPAIQVQTTRVALRGPYTELINLMGDIE
HHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCHHHHHHHHHHHH
RLRTLFRVSNISLNPVQDTGELDAAFDLIAYIYNKDVPLGTAPPPEGQTAPGQ
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGSVEGFPDEQLVVPPAGPPVLLGVELTPIRIGLLIGITGLAAAGFLAFTQLRPLIEEV
CCCCCCCCCCCEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALEREVANKTTQLQDIKSQIASLQDVPNQVERARVEREQISALLSTPENADTQLLDLNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVQGQPNSELRSFSPSPLTPASSANPEVPGIIAPAIQVQTTRVALRGPYTELINLMGDIE
HHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCHHHHHHHHHHHH
RLRTLFRVSNISLNPVQDTGELDAAFDLIAYIYNKDVPLGTAPPPEGQTAPGQ
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA