Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607944

Identifier: 86607944

GI number: 86607944

Start: 456261

End: 456707

Strand: Direct

Name: 86607944

Synonym: CYB_0449

Alternate gene names: NA

Gene position: 456261-456707 (Clockwise)

Preceding gene: 86607938

Following gene: 86607946

Centisome position: 14.98

GC content: 57.05

Gene sequence:

>447_bases
ATGATCAACTACGCCGATTTGACAGACGAGCAGCGCCAGCTCTACCTCAAAGCCCTGATCGCGGTGGCCCGAGTGGATGG
CCAGTTGGACGAAGAAGAAACCTCTTTTTTTATGCAAATTGCAGAAGGGGTAGGCATCGAAGCGCCACTGGCCCAGACCT
ATCTGGCGGATGAAACAGGTGCGCCTTTGGATATCAGCGGGATCCCGCCCATGCGCAACGCGGCGGGGGCCTTGATCCTG
CGGGATCTGGCGGCGATGGCGGTGGTGAACAGCCAGTTGGTGGAAAAGGAAGAGGAGCTTATTTTCCAGATCGGCAAAGC
CATGCAGTTCAGCGCTGAGGAGATCAACGAGTTTATCGACTGGGCCTTCATGGGACTGCAGTGGCAACTGAAAAGCGCAT
CCCTGCTGGAGCGCTATGCCCAGCCCTCCCCCCAACCTTCTGAATGA

Upstream 100 bases:

>100_bases
TAGGCGATCTTCCCCTCGACTGGAAAATGTCGGATCCCGGTTTGGAGGGCAATCTTCATGGCAGAGTTAAAGAGAAAACC
CACACTCAGCGACGACCCCC

Downstream 100 bases:

>100_bases
CCTGGGGTACTAGATAGCATCACAACGGCCAGCCCCCGCTGCAGATATTGACAGCCCAGTTTGGCGTTCCCCTGAGCCAA
GCAAGGGGAGACTTTCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MINYADLTDEQRQLYLKALIAVARVDGQLDEEETSFFMQIAEGVGIEAPLAQTYLADETGAPLDISGIPPMRNAAGALIL
RDLAAMAVVNSQLVEKEEELIFQIGKAMQFSAEEINEFIDWAFMGLQWQLKSASLLERYAQPSPQPSE

Sequences:

>Translated_148_residues
MINYADLTDEQRQLYLKALIAVARVDGQLDEEETSFFMQIAEGVGIEAPLAQTYLADETGAPLDISGIPPMRNAAGALIL
RDLAAMAVVNSQLVEKEEELIFQIGKAMQFSAEEINEFIDWAFMGLQWQLKSASLLERYAQPSPQPSE
>Mature_148_residues
MINYADLTDEQRQLYLKALIAVARVDGQLDEEETSFFMQIAEGVGIEAPLAQTYLADETGAPLDISGIPPMRNAAGALIL
RDLAAMAVVNSQLVEKEEELIFQIGKAMQFSAEEINEFIDWAFMGLQWQLKSASLLERYAQPSPQPSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16410; Mature: 16410

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYADLTDEQRQLYLKALIAVARVDGQLDEEETSFFMQIAEGVGIEAPLAQTYLADETG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
APLDISGIPPMRNAAGALILRDLAAMAVVNSQLVEKEEELIFQIGKAMQFSAEEINEFID
CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WAFMGLQWQLKSASLLERYAQPSPQPSE
HHHHHHHHCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MINYADLTDEQRQLYLKALIAVARVDGQLDEEETSFFMQIAEGVGIEAPLAQTYLADETG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
APLDISGIPPMRNAAGALILRDLAAMAVVNSQLVEKEEELIFQIGKAMQFSAEEINEFID
CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WAFMGLQWQLKSASLLERYAQPSPQPSE
HHHHHHHHCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA