| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yczJ [H]
Identifier: 86607935
GI number: 86607935
Start: 449105
End: 449419
Strand: Direct
Name: yczJ [H]
Synonym: CYB_0439
Alternate gene names: 86607935
Gene position: 449105-449419 (Clockwise)
Preceding gene: 86607934
Following gene: 86607937
Centisome position: 14.74
GC content: 56.19
Gene sequence:
>315_bases ATGACTGCTTCCTCCATCCTTGAGGTGGCTCAGTTTGAAATTACCCCCGGCTCTGAAGCCGCCTTTGAAGCCGCCATCGC TCAAGCTTTCATCTATTTGCAGCAGACCGACGGCTACCAAGGGCACCAACTGCAGCGCTGTCTGGAGCACCCTCAGCAAT ACCTACTGCTCGTTCAGTGGGGATCCCTAGAGGCCCATCTGGTCAACTTTCGCCAATCGGAAAACTTTGTCCGCTGGCGT GCCCTCATCGAACCCTACTTTGCTCGCCCACCCCAGGTGCTGCACTACCAGTTGCTGACCGGATCCCCTTTTTGA
Upstream 100 bases:
>100_bases CTGCCTCCACTGCACTGCGCCTGTTGAGCCAGGGGCGGATCCCCGCTCTGGACGCTGGAAGGGCACAAGCAAAACCGAAT GCGGCCTGCATACCTAACCC
Downstream 100 bases:
>100_bases TTTGAAATAGGGCACCTGTCCACTCTCCACCTAGGTTGACCCCAATGGGACAGGTTAAGATGTGATATTATTTGTTTCCG GCCTTCAGGCAGATGCACAG
Product: antibiotic biosynthesis monooxygenase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTASSILEVAQFEITPGSEAAFEAAIAQAFIYLQQTDGYQGHQLQRCLEHPQQYLLLVQWGSLEAHLVNFRQSENFVRWR ALIEPYFARPPQVLHYQLLTGSPF
Sequences:
>Translated_104_residues MTASSILEVAQFEITPGSEAAFEAAIAQAFIYLQQTDGYQGHQLQRCLEHPQQYLLLVQWGSLEAHLVNFRQSENFVRWR ALIEPYFARPPQVLHYQLLTGSPF >Mature_103_residues TASSILEVAQFEITPGSEAAFEAAIAQAFIYLQQTDGYQGHQLQRCLEHPQQYLLLVQWGSLEAHLVNFRQSENFVRWRA LIEPYFARPPQVLHYQLLTGSPF
Specific function: Unknown
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: NA
Molecular weight: Translated: 11952; Mature: 11820
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSILEVAQFEITPGSEAAFEAAIAQAFIYLQQTDGYQGHQLQRCLEHPQQYLLLVQW CCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCHHHEEEEEEC GSLEAHLVNFRQSENFVRWRALIEPYFARPPQVLHYQLLTGSPF CCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCHHEEEEEECCCCC >Mature Secondary Structure TASSILEVAQFEITPGSEAAFEAAIAQAFIYLQQTDGYQGHQLQRCLEHPQQYLLLVQW CHHHHHHHHHEECCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCHHHEEEEEEC GSLEAHLVNFRQSENFVRWRALIEPYFARPPQVLHYQLLTGSPF CCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCHHEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]