| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is nifZ [H]
Identifier: 86607923
GI number: 86607923
Start: 435460
End: 435723
Strand: Direct
Name: nifZ [H]
Synonym: CYB_0426
Alternate gene names: 86607923
Gene position: 435460-435723 (Clockwise)
Preceding gene: 86607922
Following gene: 86607924
Centisome position: 14.29
GC content: 56.82
Gene sequence:
>264_bases ATGAGCGACGAACTGGAGCTGGATCGCCCTCCCCAATTTGAGCTGGGCGACAAAGTCCGCATCCGTAAGGTCATCCGCAA CGATGGCACCTTCTTCGGCCAGCCGGTGGGGAAAATCTTGGCCGTTCCGGGCGACGAAGGTTACGTGATTTCCATTGGCA CCTTTCTACAACGGTTTTACGTCTATGCCGTCCACTGCTTGGCCAAAGGCTTGGTGGTGGGGTGCCGTGCCCAAGAGCTG GAACTTGTGGAGAAAGGGCTATGA
Upstream 100 bases:
>100_bases CCATTTTGGCAGCCGTGTCTCGACGGGCGCGCCAAGTAGGCCGCAGCCTAACCCGCCAAGAGCTTTGTCAGGTGCTGGCA GAAATCACAGGAGGTACCCC
Downstream 100 bases:
>100_bases AAGTCATCCTGCACGAAAGTGCCTACGGGCATTTGATGGTCTACGTTCCCAAAAAAGATCTGGAAGAATCGGTTGTGGCC ACCCGTTCAGAGGCCGGGGA
Product: NifZ protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSDELELDRPPQFELGDKVRIRKVIRNDGTFFGQPVGKILAVPGDEGYVISIGTFLQRFYVYAVHCLAKGLVVGCRAQEL ELVEKGL
Sequences:
>Translated_87_residues MSDELELDRPPQFELGDKVRIRKVIRNDGTFFGQPVGKILAVPGDEGYVISIGTFLQRFYVYAVHCLAKGLVVGCRAQEL ELVEKGL >Mature_86_residues SDELELDRPPQFELGDKVRIRKVIRNDGTFFGQPVGKILAVPGDEGYVISIGTFLQRFYVYAVHCLAKGLVVGCRAQELE LVEKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nifZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007415 [H]
Pfam domain/function: PF04319 NifZ [H]
EC number: NA
Molecular weight: Translated: 9710; Mature: 9579
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDELELDRPPQFELGDKVRIRKVIRNDGTFFGQPVGKILAVPGDEGYVISIGTFLQRFY CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHHHH VYAVHCLAKGLVVGCRAQELELVEKGL HHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure SDELELDRPPQFELGDKVRIRKVIRNDGTFFGQPVGKILAVPGDEGYVISIGTFLQRFY CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHHHH VYAVHCLAKGLVVGCRAQELELVEKGL HHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]