| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607912
Identifier: 86607912
GI number: 86607912
Start: 424516
End: 424845
Strand: Reverse
Name: 86607912
Synonym: CYB_0415
Alternate gene names: NA
Gene position: 424845-424516 (Counterclockwise)
Preceding gene: 86607913
Following gene: 86607911
Centisome position: 13.94
GC content: 61.21
Gene sequence:
>330_bases TTGAGACTCGCCCCCTGCTTCCCAACCGGTGAGCTTATGTCCCCCCTTGTTTCTCCCCCACCGAAAACGGCTGAAGTGCT GCAGGTGCCCCGTTGCGATCGCTGGCGGATTCTCTACCGTCTGCAGGAGCTGGATTTGACCTGTGGCTGTACCCCGACCG GCCAACTGTGGGTGATGATTCGCACCCCCACCGAAGCCCTCCTCGTCCACAGTGTGCTCCGCCTTTTCACCCTCAACCGC TCTGGCTGGCTGAATTGGTTGGATCGCTGCTGGTCTCTCCAGACCTGGGATCCCCCTGAGAGATCTGCAGGAGGGGATGA CCACCCCTGA
Upstream 100 bases:
>100_bases AGTCCTGATCGCCCGCTGCCAAGCCTGAGCCCCTGCAGCCGCTTGCTATAAGCGGGGGATATAAGCGGGGGAACAGAACC CCAACGGTTCTGCCCCTCTG
Downstream 100 bases:
>100_bases ACCTCTGCCGTTTGCCTTCTTGCTTCTCCTGTTCACCTCGTTTTGGTAGCGCCAATGACCACTCCATCCCCCTCAACTCG CTCCTTCCAACAAGTCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MRLAPCFPTGELMSPLVSPPPKTAEVLQVPRCDRWRILYRLQELDLTCGCTPTGQLWVMIRTPTEALLVHSVLRLFTLNR SGWLNWLDRCWSLQTWDPPERSAGGDDHP
Sequences:
>Translated_109_residues MRLAPCFPTGELMSPLVSPPPKTAEVLQVPRCDRWRILYRLQELDLTCGCTPTGQLWVMIRTPTEALLVHSVLRLFTLNR SGWLNWLDRCWSLQTWDPPERSAGGDDHP >Mature_109_residues MRLAPCFPTGELMSPLVSPPPKTAEVLQVPRCDRWRILYRLQELDLTCGCTPTGQLWVMIRTPTEALLVHSVLRLFTLNR SGWLNWLDRCWSLQTWDPPERSAGGDDHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12513; Mature: 12513
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAPCFPTGELMSPLVSPPPKTAEVLQVPRCDRWRILYRLQELDLTCGCTPTGQLWVMI CCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEEE RTPTEALLVHSVLRLFTLNRSGWLNWLDRCWSLQTWDPPERSAGGDDHP ECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLAPCFPTGELMSPLVSPPPKTAEVLQVPRCDRWRILYRLQELDLTCGCTPTGQLWVMI CCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEEE RTPTEALLVHSVLRLFTLNRSGWLNWLDRCWSLQTWDPPERSAGGDDHP ECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA