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The map label for this gene is ycfF [C]

Identifier: 86607875

GI number: 86607875

Start: 394086

End: 394427

Strand: Direct

Name: ycfF [C]

Synonym: CYB_0378

Alternate gene names: 86607875

Gene position: 394086-394427 (Clockwise)

Preceding gene: 86607874

Following gene: 86607876

Centisome position: 12.93

GC content: 57.02

Gene sequence:

>342_bases
ATGAGCGACACAGTTTTCGGCAAGATCATCCGCAGGGAGATCCCTGCACAAATCGTTTACGAAGACGATAGAGCCCTGGC
CTTCAAAGATATTGCCCCCCAAGCCCCTGTCCACATTTTGGTGGTGCCCAAAGAGCCCATCCCCGGCATTTCCCAGGCCA
AGCCCGAACATGAGGCATTGCTGGGACATCTCCTGCTGACCGCTCAGCGGGTGGCTGCCGAGGCAGGTTTAAATAAAGGC
TACCGATTGGTGATCAACGAAGGAGAAGACGGCGGGCAAACCGTCTTTCATCTCCACATTCACGTTCTGGGCGGTCGGGG
GATGGGCTGGCCCCCAGGTTGA

Upstream 100 bases:

>100_bases
GCTGCTGAAGCAGTAGATGCCGAGCGCCACTCTCGCCACCTGGGTAGGAGAAGGCGCGGTTAGCAGGTAGGCTAGGGGCA
GAACTGGTTTGTGAGCACCC

Downstream 100 bases:

>100_bases
GCGATGGTTTTTCCCACCCATTGGAGCCTCTGCAGGTACAATCCTGTCATTACGGAGGTAAACAGCGGGCGGGGTCTGGG
ATCGATGGAGTGGCACGTAA

Product: histidine triad family protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSDTVFGKIIRREIPAQIVYEDDRALAFKDIAPQAPVHILVVPKEPIPGISQAKPEHEALLGHLLLTAQRVAAEAGLNKG
YRLVINEGEDGGQTVFHLHIHVLGGRGMGWPPG

Sequences:

>Translated_113_residues
MSDTVFGKIIRREIPAQIVYEDDRALAFKDIAPQAPVHILVVPKEPIPGISQAKPEHEALLGHLLLTAQRVAAEAGLNKG
YRLVINEGEDGGQTVFHLHIHVLGGRGMGWPPG
>Mature_112_residues
SDTVFGKIIRREIPAQIVYEDDRALAFKDIAPQAPVHILVVPKEPIPGISQAKPEHEALLGHLLLTAQRVAAEAGLNKGY
RLVINEGEDGGQTVFHLHIHVLGGRGMGWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=111, Percent_Identity=64.8648648648649, Blast_Score=164, Evalue=1e-41,
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=60.9090909090909, Blast_Score=148, Evalue=1e-36,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=50, Blast_Score=107, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17506713, Length=112, Percent_Identity=58.0357142857143, Blast_Score=150, Evalue=1e-37,
Organism=Drosophila melanogaster, GI28574010, Length=111, Percent_Identity=56.7567567567568, Blast_Score=145, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24581222, Length=111, Percent_Identity=56.7567567567568, Blast_Score=144, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12256; Mature: 12125

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTVFGKIIRREIPAQIVYEDDRALAFKDIAPQAPVHILVVPKEPIPGISQAKPEHEAL
CCCHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
LGHLLLTAQRVAAEAGLNKGYRLVINEGEDGGQTVFHLHIHVLGGRGMGWPPG
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SDTVFGKIIRREIPAQIVYEDDRALAFKDIAPQAPVHILVVPKEPIPGISQAKPEHEAL
CCHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
LGHLLLTAQRVAAEAGLNKGYRLVINEGEDGGQTVFHLHIHVLGGRGMGWPPG
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108129; 1472710 [H]