Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607873

Identifier: 86607873

GI number: 86607873

Start: 390961

End: 393057

Strand: Direct

Name: 86607873

Synonym: CYB_0376

Alternate gene names: NA

Gene position: 390961-393057 (Clockwise)

Preceding gene: 86607872

Following gene: 86607874

Centisome position: 12.83

GC content: 60.99

Gene sequence:

>2097_bases
GTGCTTACTTCCCTTTACTACCGCGAGATCCCTTGCCCCGATAGTGCTCAAGTGCTGCGCTGGCTACAGGAGTGTATCCC
CCTGCCCCAAGGCAGCCAGAAGGTTCTTACCCCCACGGGCCTGCGCCTACAGGGATCCGGCGCTGAGCTGGCCCTTTTCT
TGTGGTCGGGGCTGAACACTACCTATCTCAAGGTGTTCCAGTGGTCGGAACAGCCCTTCCCCCGCCAAGCTCGCTGGCTG
GGAGAGCTGGAACAGGCCATCCAAAGCCAATTTCCCCACCGCTACCCGCAGTTGCCCCAGATCGACCTGAACCGGGGATC
CATCTTCGATCAGCTTGAGCCTTTCTACCCGCAAACGGTGAAGTATTTTCGGCGGATCCCCAATGGAGAATTTGACCTGC
AGCGGGTGTACTGGTGGGAAAAGCGCTGGCGGGAAGAAGTGCAACATTGCCACGCAGCCCACCGCCCTGCTCAGCCGGTC
TTGTTTCGCCAGCCTGGCCCTGAGCCGGCCCCGGTGGAGTGGGATCTGGCCATCGTGGGAGGAGCGCTGGGAGCCATCTA
TGGAGCGGCCATGGCTCGCTTGGGCTACCGCGTGGCCTTGGTGGAGCGACTCCCTTTTGGCCGCATGAACCGCGAGTGGA
ACATCTCCCGGCGGGAGCTGCAAACCCTGGTGGATTTGGGCCTTTTGAGCGCCGAGCAGATGGAGAGCTTGATCCTGCGG
GAATACACGGATGGGTTCAACAAGTTTTTTGACGGCAATAGCCCGGTTCGCGCTCCCGTTTTGCACACGCCGACGGTACT
CAATCTGGCCATTGACGCGGAAAAGCTATTGCAGCTCTGTGGCCAAATTCTCACTTCCTGCGGGGGAGCTATCTACGAGC
GCACCGAGTTTCAGCGGGCCTATGTTGGCGAACAAGGCGTCACGCTGGTTTTGAAGGATTTGCCCACCGGCGAGGAGTTT
CGGCTGGGATCCCGCCTTGTGGTGGATGCTATGGGAACAGTCTCTCCCATTGCCCAGCAGCTTTACCGCCATCGGGCTTT
TGATAGCGTCTGCCCCACGGTGGGGGCTACCATTGCGGGGGGGTTTGAGCCAGGGGTATGGGATCCCCAGTTTGGGGACA
TTCTGGCCAGCCACGGGGACATCAGCCGCGGTCGGCAACTCATTTGGGAGCTGTTCCCCGGCCCAGGCGAAGATCTTACC
TTTTATCTGTTCCACTACCACCAGGTGCATCCGGAAAACCCCGGATCCCTGCTGGAACTGTACGAAGATTTTTTCACCAT
TCTGCCGGAATACCGCCGCTGCGACCCGGAGCGCCTGCAGTGGAAAAAAGCGACCTTCGGCTATATCCCCGGACGATTTG
GCCAGCCCCGGCACCCTGTTCGCGGCAGCGGGGCGGAGTCTTCGGAACCCTTTGACCGGATACTGCTCATAGGGGATGCG
GCGGCTATGCAATCGCCCCTTAGCTTTACCGGCTTTGGATCCCTGGTGCGCAACTGCCCCCGCCTGTGCGATCTGCTGGA
TACGGCGCTGCGCCACGACCTGCTCAGGGCTGCAGACTTAGCCCAGATCCGGGCCTACCAGGGCAACTCCGCCGTCACCT
GGCTCTTCTCGCGGGGGATGATGGTGCCCACCGGCAAGGTGCTGCCCCCCGAGCGCATCAATGCCACTCTCAACAGCTTT
TTCGGCATTCTCGCCACCGAGCCGCCGGAGGTGGTGGACGATTTCATCAAAGACCGGGCTGGCTGGCTGGCCTTTAACCG
CATGGCCATCAAAGCTGCCCTGCAAAACCCACGGCTGCTGCTGTGGATCTGGGAGGCCGTAGGGGCCAAAGGCTTTGCCC
AGTGGCTACCCACCTACCTCAGCTATACCGGCCTGGCCTTGACCTCTGCTTTGCTCAGGGGCTGGCTTCCAAATCTGCTG
CGTCGCCTGCAGCCCTGGCTAGAAGCGCGTTACCCCCGCCTGTGGCTGCGCTGCCTGCAGTGGAGCTACACCCTCACCTA
TGGGGTAGGGCAGCCGCGCATCCAGTTTCAACTCCCCCCCACTCAAGAAAAGACCCAAGACGCAATACCGACTTGGGTAG
GATCCCTGCAGCAGTGA

Upstream 100 bases:

>100_bases
GGGGAAACCTGGGTAGGGGGTGATCCCTGGGATCGGCAAAGGGAGGGATCCCCTCATGTCACAATGGGTAAAGATTTGCT
CGGTTTCTTATCTCGGCGCC

Downstream 100 bases:

>100_bases
CATACTCCCGCACTCACGCTGATGCACAGAGGGCGGGGCTCCCCGGCGGTCTAGCTAAATGCACCGGACACCAAGGCAAT
AGCGCTGTCGCCGTGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MLTSLYYREIPCPDSAQVLRWLQECIPLPQGSQKVLTPTGLRLQGSGAELALFLWSGLNTTYLKVFQWSEQPFPRQARWL
GELEQAIQSQFPHRYPQLPQIDLNRGSIFDQLEPFYPQTVKYFRRIPNGEFDLQRVYWWEKRWREEVQHCHAAHRPAQPV
LFRQPGPEPAPVEWDLAIVGGALGAIYGAAMARLGYRVALVERLPFGRMNREWNISRRELQTLVDLGLLSAEQMESLILR
EYTDGFNKFFDGNSPVRAPVLHTPTVLNLAIDAEKLLQLCGQILTSCGGAIYERTEFQRAYVGEQGVTLVLKDLPTGEEF
RLGSRLVVDAMGTVSPIAQQLYRHRAFDSVCPTVGATIAGGFEPGVWDPQFGDILASHGDISRGRQLIWELFPGPGEDLT
FYLFHYHQVHPENPGSLLELYEDFFTILPEYRRCDPERLQWKKATFGYIPGRFGQPRHPVRGSGAESSEPFDRILLIGDA
AAMQSPLSFTGFGSLVRNCPRLCDLLDTALRHDLLRAADLAQIRAYQGNSAVTWLFSRGMMVPTGKVLPPERINATLNSF
FGILATEPPEVVDDFIKDRAGWLAFNRMAIKAALQNPRLLLWIWEAVGAKGFAQWLPTYLSYTGLALTSALLRGWLPNLL
RRLQPWLEARYPRLWLRCLQWSYTLTYGVGQPRIQFQLPPTQEKTQDAIPTWVGSLQQ

Sequences:

>Translated_698_residues
MLTSLYYREIPCPDSAQVLRWLQECIPLPQGSQKVLTPTGLRLQGSGAELALFLWSGLNTTYLKVFQWSEQPFPRQARWL
GELEQAIQSQFPHRYPQLPQIDLNRGSIFDQLEPFYPQTVKYFRRIPNGEFDLQRVYWWEKRWREEVQHCHAAHRPAQPV
LFRQPGPEPAPVEWDLAIVGGALGAIYGAAMARLGYRVALVERLPFGRMNREWNISRRELQTLVDLGLLSAEQMESLILR
EYTDGFNKFFDGNSPVRAPVLHTPTVLNLAIDAEKLLQLCGQILTSCGGAIYERTEFQRAYVGEQGVTLVLKDLPTGEEF
RLGSRLVVDAMGTVSPIAQQLYRHRAFDSVCPTVGATIAGGFEPGVWDPQFGDILASHGDISRGRQLIWELFPGPGEDLT
FYLFHYHQVHPENPGSLLELYEDFFTILPEYRRCDPERLQWKKATFGYIPGRFGQPRHPVRGSGAESSEPFDRILLIGDA
AAMQSPLSFTGFGSLVRNCPRLCDLLDTALRHDLLRAADLAQIRAYQGNSAVTWLFSRGMMVPTGKVLPPERINATLNSF
FGILATEPPEVVDDFIKDRAGWLAFNRMAIKAALQNPRLLLWIWEAVGAKGFAQWLPTYLSYTGLALTSALLRGWLPNLL
RRLQPWLEARYPRLWLRCLQWSYTLTYGVGQPRIQFQLPPTQEKTQDAIPTWVGSLQQ
>Mature_698_residues
MLTSLYYREIPCPDSAQVLRWLQECIPLPQGSQKVLTPTGLRLQGSGAELALFLWSGLNTTYLKVFQWSEQPFPRQARWL
GELEQAIQSQFPHRYPQLPQIDLNRGSIFDQLEPFYPQTVKYFRRIPNGEFDLQRVYWWEKRWREEVQHCHAAHRPAQPV
LFRQPGPEPAPVEWDLAIVGGALGAIYGAAMARLGYRVALVERLPFGRMNREWNISRRELQTLVDLGLLSAEQMESLILR
EYTDGFNKFFDGNSPVRAPVLHTPTVLNLAIDAEKLLQLCGQILTSCGGAIYERTEFQRAYVGEQGVTLVLKDLPTGEEF
RLGSRLVVDAMGTVSPIAQQLYRHRAFDSVCPTVGATIAGGFEPGVWDPQFGDILASHGDISRGRQLIWELFPGPGEDLT
FYLFHYHQVHPENPGSLLELYEDFFTILPEYRRCDPERLQWKKATFGYIPGRFGQPRHPVRGSGAESSEPFDRILLIGDA
AAMQSPLSFTGFGSLVRNCPRLCDLLDTALRHDLLRAADLAQIRAYQGNSAVTWLFSRGMMVPTGKVLPPERINATLNSF
FGILATEPPEVVDDFIKDRAGWLAFNRMAIKAALQNPRLLLWIWEAVGAKGFAQWLPTYLSYTGLALTSALLRGWLPNLL
RRLQPWLEARYPRLWLRCLQWSYTLTYGVGQPRIQFQLPPTQEKTQDAIPTWVGSLQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79367; Mature: 79367

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLYYREIPCPDSAQVLRWLQECIPLPQGSQKVLTPTGLRLQGSGAELALFLWSGLNT
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCH
TYLKVFQWSEQPFPRQARWLGELEQAIQSQFPHRYPQLPQIDLNRGSIFDQLEPFYPQTV
HEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCHHHH
KYFRRIPNGEFDLQRVYWWEKRWREEVQHCHAAHRPAQPVLFRQPGPEPAPVEWDLAIVG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEHHHHH
GALGAIYGAAMARLGYRVALVERLPFGRMNREWNISRRELQTLVDLGLLSAEQMESLILR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
EYTDGFNKFFDGNSPVRAPVLHTPTVLNLAIDAEKLLQLCGQILTSCGGAIYERTEFQRA
HHHHHHHHHCCCCCCCCCCEECCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YVGEQGVTLVLKDLPTGEEFRLGSRLVVDAMGTVSPIAQQLYRHRAFDSVCPTVGATIAG
HCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFEPGVWDPQFGDILASHGDISRGRQLIWELFPGPGEDLTFYLFHYHQVHPENPGSLLEL
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHH
YEDFFTILPEYRRCDPERLQWKKATFGYIPGRFGQPRHPVRGSGAESSEPFDRILLIGDA
HHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECH
AAMQSPLSFTGFGSLVRNCPRLCDLLDTALRHDLLRAADLAQIRAYQGNSAVTWLFSRGM
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCE
MVPTGKVLPPERINATLNSFFGILATEPPEVVDDFIKDRAGWLAFNRMAIKAALQNPRLL
ECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LWIWEAVGAKGFAQWLPTYLSYTGLALTSALLRGWLPNLLRRLQPWLEARYPRLWLRCLQ
EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WSYTLTYGVGQPRIQFQLPPTQEKTQDAIPTWVGSLQQ
HHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTSLYYREIPCPDSAQVLRWLQECIPLPQGSQKVLTPTGLRLQGSGAELALFLWSGLNT
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCEEEEEEECCCCH
TYLKVFQWSEQPFPRQARWLGELEQAIQSQFPHRYPQLPQIDLNRGSIFDQLEPFYPQTV
HEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCHHHH
KYFRRIPNGEFDLQRVYWWEKRWREEVQHCHAAHRPAQPVLFRQPGPEPAPVEWDLAIVG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEHHHHH
GALGAIYGAAMARLGYRVALVERLPFGRMNREWNISRRELQTLVDLGLLSAEQMESLILR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
EYTDGFNKFFDGNSPVRAPVLHTPTVLNLAIDAEKLLQLCGQILTSCGGAIYERTEFQRA
HHHHHHHHHCCCCCCCCCCEECCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YVGEQGVTLVLKDLPTGEEFRLGSRLVVDAMGTVSPIAQQLYRHRAFDSVCPTVGATIAG
HCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFEPGVWDPQFGDILASHGDISRGRQLIWELFPGPGEDLTFYLFHYHQVHPENPGSLLEL
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHH
YEDFFTILPEYRRCDPERLQWKKATFGYIPGRFGQPRHPVRGSGAESSEPFDRILLIGDA
HHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECH
AAMQSPLSFTGFGSLVRNCPRLCDLLDTALRHDLLRAADLAQIRAYQGNSAVTWLFSRGM
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCE
MVPTGKVLPPERINATLNSFFGILATEPPEVVDDFIKDRAGWLAFNRMAIKAALQNPRLL
ECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LWIWEAVGAKGFAQWLPTYLSYTGLALTSALLRGWLPNLLRRLQPWLEARYPRLWLRCLQ
EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WSYTLTYGVGQPRIQFQLPPTQEKTQDAIPTWVGSLQQ
HHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA