| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is fba [H]
Identifier: 86607854
GI number: 86607854
Start: 372178
End: 373257
Strand: Reverse
Name: fba [H]
Synonym: CYB_0357
Alternate gene names: 86607854
Gene position: 373257-372178 (Counterclockwise)
Preceding gene: 86607856
Following gene: 86607851
Centisome position: 12.25
GC content: 59.26
Gene sequence:
>1080_bases ATGGCTCTCGTTGCAATGCGGACGCTACTGGATCATGCCGCCGAACATGGCTACGGCATTCCTGCCTTCAACGTCAACAA CATGGAGCAGATCCAAGCAATCATGCAGGCAGCCCATGAAACCAACAGCCCCGTTATCCTGCAAGCCTCTCGAGGGGCAC GCAAGTATGCGGGCGAGAACTTTCTGCGGCACCTGATCCTGGCGGCAGTGGAGACCTACCCCCACATCCCCGTCGCCATG CACCAAGACCACGGCAATAGCCCGGCTACCTGCTATTCCGCCATCCGCAACGGCTTCACCAGCGTCATGATGGATGGATC CCTCAAGGAAGATGCCAAAACCCCGGCCAGCTACGAGTACAACGTGGCCGTTACCTCCGAGGTGGTGAAAGTGGCTCATG CAATCGGGGTGAGTGTGGAAGGGGAACTGGGCTGCCTGGGATCCCTGGAGACGGGCCGTGGGGAAGCGGAAGATGGCCAC GGCGCGGAAGAGGCGCTCAGCCATGACCAACTCCTCACCGACCCCGACCAAGCGGTGGACTTTGTGGAGCGAACTCAGGT GGATGCGCTGGCCGTAGCCATTGGTACCAGCCATGGCGCCTACAAGTTCTCCCGGAAGCCCACTGGTGACATCCTCGACA TGGAGCGCATTGCTGAGATCCACCGCCGCCTGCCCAACACGCACCTGGTGATGCACGGTTCCTCCTCGGTGCCCAAGGAG CTGATCGACATCATCAACGAATACGGCGGCTCCATTCCCGAGACTTACGGTGTGCCGCTGGAAGAAATTCAGCGGGGCAT CCAAAATGGAGTGCGCAAAGTAAACATCGACACCGACAACCGCCTGGCCATCACAGCTGCCGTGCGCCGCGCTCTGGCCG AGAATCCGAAAGAGTTTGACCCCCGCCACTTCCTCAAGCCTTCCATCAAGGAAATGCAAAAAGTCTGTGCTGAGCGCTAC ATTGCCTTCGGCTGTGCTGGCCATGGCACCAAAGTTCCGGTGGTTACCTTGGATGAGATGGCAGCCAAGTATGCTTCTGG AGCTTTGGCGGCTCAGGTGAAGAAGACCGTTGCGGTCTAG
Upstream 100 bases:
>100_bases CAGATCCCCGGCGGCTTATCCGCCAAAACGTAAAAAGTATCTTAAGATCAACGGTAAGCAAATCTCATACCCACTAGGTC AGCACCTCAGGAGGTAACCG
Downstream 100 bases:
>100_bases TCCCCACATCCTGCAAGAACTCTAGAATGCTTGCCGGGGCGCTTCCAGGGTTTTCCTTGGAGATCAGCTAGGTCACTGGA CTCAGATTGGACAAATAAGG
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MALVAMRTLLDHAAEHGYGIPAFNVNNMEQIQAIMQAAHETNSPVILQASRGARKYAGENFLRHLILAAVETYPHIPVAM HQDHGNSPATCYSAIRNGFTSVMMDGSLKEDAKTPASYEYNVAVTSEVVKVAHAIGVSVEGELGCLGSLETGRGEAEDGH GAEEALSHDQLLTDPDQAVDFVERTQVDALAVAIGTSHGAYKFSRKPTGDILDMERIAEIHRRLPNTHLVMHGSSSVPKE LIDIINEYGGSIPETYGVPLEEIQRGIQNGVRKVNIDTDNRLAITAAVRRALAENPKEFDPRHFLKPSIKEMQKVCAERY IAFGCAGHGTKVPVVTLDEMAAKYASGALAAQVKKTVAV
Sequences:
>Translated_359_residues MALVAMRTLLDHAAEHGYGIPAFNVNNMEQIQAIMQAAHETNSPVILQASRGARKYAGENFLRHLILAAVETYPHIPVAM HQDHGNSPATCYSAIRNGFTSVMMDGSLKEDAKTPASYEYNVAVTSEVVKVAHAIGVSVEGELGCLGSLETGRGEAEDGH GAEEALSHDQLLTDPDQAVDFVERTQVDALAVAIGTSHGAYKFSRKPTGDILDMERIAEIHRRLPNTHLVMHGSSSVPKE LIDIINEYGGSIPETYGVPLEEIQRGIQNGVRKVNIDTDNRLAITAAVRRALAENPKEFDPRHFLKPSIKEMQKVCAERY IAFGCAGHGTKVPVVTLDEMAAKYASGALAAQVKKTVAV >Mature_358_residues ALVAMRTLLDHAAEHGYGIPAFNVNNMEQIQAIMQAAHETNSPVILQASRGARKYAGENFLRHLILAAVETYPHIPVAMH QDHGNSPATCYSAIRNGFTSVMMDGSLKEDAKTPASYEYNVAVTSEVVKVAHAIGVSVEGELGCLGSLETGRGEAEDGHG AEEALSHDQLLTDPDQAVDFVERTQVDALAVAIGTSHGAYKFSRKPTGDILDMERIAEIHRRLPNTHLVMHGSSSVPKEL IDIINEYGGSIPETYGVPLEEIQRGIQNGVRKVNIDTDNRLAITAAVRRALAENPKEFDPRHFLKPSIKEMQKVCAERYI AFGCAGHGTKVPVVTLDEMAAKYASGALAAQVKKTVAV
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=329, Percent_Identity=35.5623100303951, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI87082041, Length=327, Percent_Identity=33.3333333333333, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI1788072, Length=329, Percent_Identity=31.0030395136778, Blast_Score=115, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6322790, Length=357, Percent_Identity=27.7310924369748, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38827; Mature: 38696
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVAMRTLLDHAAEHGYGIPAFNVNNMEQIQAIMQAAHETNSPVILQASRGARKYAGEN CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH FLRHLILAAVETYPHIPVAMHQDHGNSPATCYSAIRNGFTSVMMDGSLKEDAKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCHHHCCCCCCEEE NVAVTSEVVKVAHAIGVSVEGELGCLGSLETGRGEAEDGHGAEEALSHDQLLTDPDQAVD EEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHH FVERTQVDALAVAIGTSHGAYKFSRKPTGDILDMERIAEIHRRLPNTHLVMHGSSSVPKE HHHHHHHHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LIDIINEYGGSIPETYGVPLEEIQRGIQNGVRKVNIDTDNRLAITAAVRRALAENPKEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC PRHFLKPSIKEMQKVCAERYIAFGCAGHGTKVPVVTLDEMAAKYASGALAAQVKKTVAV CHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure ALVAMRTLLDHAAEHGYGIPAFNVNNMEQIQAIMQAAHETNSPVILQASRGARKYAGEN HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH FLRHLILAAVETYPHIPVAMHQDHGNSPATCYSAIRNGFTSVMMDGSLKEDAKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCHHHCCCCCCEEE NVAVTSEVVKVAHAIGVSVEGELGCLGSLETGRGEAEDGHGAEEALSHDQLLTDPDQAVD EEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHH FVERTQVDALAVAIGTSHGAYKFSRKPTGDILDMERIAEIHRRLPNTHLVMHGSSSVPKE HHHHHHHHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LIDIINEYGGSIPETYGVPLEEIQRGIQNGVRKVNIDTDNRLAITAAVRRALAENPKEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC PRHFLKPSIKEMQKVCAERYIAFGCAGHGTKVPVVTLDEMAAKYASGALAAQVKKTVAV CHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9298645 [H]