| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yfeW [H]
Identifier: 86607829
GI number: 86607829
Start: 347947
End: 349098
Strand: Reverse
Name: yfeW [H]
Synonym: CYB_0331
Alternate gene names: 86607829
Gene position: 349098-347947 (Counterclockwise)
Preceding gene: 86607832
Following gene: 86607828
Centisome position: 11.46
GC content: 62.76
Gene sequence:
>1152_bases ATGGGTTGGGATCCAGCCTTGCTGGAGGGGCTGCTCAACTCCGCCATTCCCCACCTTTTCCCCGCTGCCCAGGTGGTCAT CCGCCACAAGGGAAGGTGTATCTACTCAAGGGCGGCAGGCCATCTCGACCCTGAGACCCGGCGCCAACCGACAACCTCGG CCACCCGTTTTGACCTGGCCTCGCTGACCAAGCTGTACACCGCCACCGCCTGCATGGCCCTGGTGGAAGCCGGAGCGTTG CTGCTGGATCAACCGGTCAGTCTCCTGTTGCCGGAGTTTCAGGGATCCCGCCCCATTGCCCCCTATGAAGATCCTCTGCA GCCGGGGAAATGGATTGCTGTGGAACCGGAATCCTTAGGCCAGCTTGTTGCAACAGAACAGGTGACGGTGCGACAGTTGC TGGCCCACACCGCCGGTTTGCCCGCCTGGCGGCCCCTGTTTCGACAGCCCGATGCCGAATCGGCCCGGCACATGGCCCTG CACACCTTTTTGGCCTACAGGCCGGGATCCCGCAGAGTCTACAGCGATCTTGGATTGATCCTGCTGGGGCTGGCTTTGGA ACGTCTGAGCGGAACCCCTCTGGATCAGATCTTGCATGCCCGGATCTTGCGGCCTCTGGGCCTGAGCCAAACTCAGTTTT ATCCAGGGGATCCCTTTGACCCATCCTCTGTCTCTGGCTCTTGTGCCCCCACCGAGCTGTGTCCTTGGCGAAAGCGCCGC CTGCAGGGGCAGGTTCACGACGAAAATGCCGCCCGCCTGGGCGGGATCGCCGGCCATGCCGGACTGTTTGCCACGGCAGA GGAAGTAGCCGCTTTCGGAGAGAGTTTTTTGACGGGATCCCTGTTGCAGCCGCAGACGGTGAGGGAAATGACCCGCGAGC AGTTGCCTCAGCAAGGGGATGCCCACCGCTGTCACGAGCGCCGGGGTTTGGGGTTTGCCTTGCGCTCTCCGGATCCCTTG GCCAGCAGCTCCCCGTTCAGCCCCAGCGCCTTCGGCCACACCGGCTTCACCGGAACCTCTCTGTGGATCGATCCAGAGCG GGAGCTGGTGGTGACGCTGCTCACCAACGCCGTCTACCACAGTCGGCAGGAGAACGGGTTCCAGGCTTTCCGGGTTGCCT TCCATCAGGCCATCCTAGAGGGGCTTTCTTGA
Upstream 100 bases:
>100_bases TGCCGTGGTGGCATCCTAGCTGGGGAAGCGGTAGGCTTTTGTAAACACCGTTACAAGTTGTTTGTTGGACTGGGGATCCC CAAGCCAGGAGGAGAAGCAG
Downstream 100 bases:
>100_bases TCATTGAGTCCCTGACCGTTCCCGCTAGGGTGCCGTAGGCATAACCGAGGCTGAGGTGGACGAGACCTTTTACCGACAGT TGGCAGACATGCTCTCCCGC
Product: carboxylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MGWDPALLEGLLNSAIPHLFPAAQVVIRHKGRCIYSRAAGHLDPETRRQPTTSATRFDLASLTKLYTATACMALVEAGAL LLDQPVSLLLPEFQGSRPIAPYEDPLQPGKWIAVEPESLGQLVATEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMAL HTFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILRPLGLSQTQFYPGDPFDPSSVSGSCAPTELCPWRKRR LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPL ASSSPFSPSAFGHTGFTGTSLWIDPERELVVTLLTNAVYHSRQENGFQAFRVAFHQAILEGLS
Sequences:
>Translated_383_residues MGWDPALLEGLLNSAIPHLFPAAQVVIRHKGRCIYSRAAGHLDPETRRQPTTSATRFDLASLTKLYTATACMALVEAGAL LLDQPVSLLLPEFQGSRPIAPYEDPLQPGKWIAVEPESLGQLVATEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMAL HTFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILRPLGLSQTQFYPGDPFDPSSVSGSCAPTELCPWRKRR LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPL ASSSPFSPSAFGHTGFTGTSLWIDPERELVVTLLTNAVYHSRQENGFQAFRVAFHQAILEGLS >Mature_382_residues GWDPALLEGLLNSAIPHLFPAAQVVIRHKGRCIYSRAAGHLDPETRRQPTTSATRFDLASLTKLYTATACMALVEAGALL LDQPVSLLLPEFQGSRPIAPYEDPLQPGKWIAVEPESLGQLVATEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMALH TFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILRPLGLSQTQFYPGDPFDPSSVSGSCAPTELCPWRKRRL QGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPLA SSSPFSPSAFGHTGFTGTSLWIDPERELVVTLLTNAVYHSRQENGFQAFRVAFHQAILEGLS
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0214 family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=372, Percent_Identity=30.3763440860215, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR022849 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41864; Mature: 41733
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWDPALLEGLLNSAIPHLFPAAQVVIRHKGRCIYSRAAGHLDPETRRQPTTSATRFDLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCCCCCHHHHHHH SLTKLYTATACMALVEAGALLLDQPVSLLLPEFQGSRPIAPYEDPLQPGKWIAVEPESLG HHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECHHHHH QLVATEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMALHTFLAYRPGSRRVYSDLGLI HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LLGLALERLSGTPLDQILHARILRPLGLSQTQFYPGDPFDPSSVSGSCAPTELCPWRKRR HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGD CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC AHRCHERRGLGFALRSPDPLASSSPFSPSAFGHTGFTGTSLWIDPERELVVTLLTNAVYH HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH SRQENGFQAFRVAFHQAILEGLS HHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GWDPALLEGLLNSAIPHLFPAAQVVIRHKGRCIYSRAAGHLDPETRRQPTTSATRFDLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCCCCCHHHHHHH SLTKLYTATACMALVEAGALLLDQPVSLLLPEFQGSRPIAPYEDPLQPGKWIAVEPESLG HHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECHHHHH QLVATEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMALHTFLAYRPGSRRVYSDLGLI HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LLGLALERLSGTPLDQILHARILRPLGLSQTQFYPGDPFDPSSVSGSCAPTELCPWRKRR HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGD CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC AHRCHERRGLGFALRSPDPLASSSPFSPSAFGHTGFTGTSLWIDPERELVVTLLTNAVYH HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH SRQENGFQAFRVAFHQAILEGLS HHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA