Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607785

Identifier: 86607785

GI number: 86607785

Start: 299410

End: 300183

Strand: Direct

Name: 86607785

Synonym: CYB_0286

Alternate gene names: NA

Gene position: 299410-300183 (Clockwise)

Preceding gene: 86607782

Following gene: 86607786

Centisome position: 9.83

GC content: 56.2

Gene sequence:

>774_bases
ATGGATGCGTCGCGCGTGGTGGCCATTGCCCACAACGTTTTCCGGGAAACGATTCGGGATCGGATTCTCTACCTGGTGAT
GGTATTTGCGGTGGCCATGCTGGGAGCCACTGTTTTGATCCCGCAGGTGGCCAACCAGGCCCACAACAAAATCATTGCCG
ACCTGGGGTTGGCAGCCATTCACTTCTTCGGCCTGATCGTGGCCATTTTCGTGGGCACAGGGCTGGTGAATAAGGAGATT
GAAAGACGCACGGTGTATGTGCTGATCGCCAAACCCATGAGCCGGGCAGAGTTCATTGTCGGCAAGCATCTGGGCCTATC
GGCGCTGCTGTCGGTGCTGGTGCTGCTGATGACGGTTGTGTTTCTGCTGAGCTTGCTGCTGGTGCAGGCCCCGATCCCCC
TTTTGGCCATTCTCTGGGCAACAGTCTTCACTTTCTTAGAGCTGGTGCTGATTGTTGCCGCGGCCCTGCTGTTCGGGGTT
TTCACTTCCTCGATTCTGGCCACCCTCTACACCATTGCCCTGTTCCTGATGGGCCATGCCAGCCGCGCCCTGCTGCAACT
GAGCAAGCTGGTGAAAGATGCCGGATTTGGCAAACTGTTTGAGGTGATTTATTTGATCCTGCCGGATTTGGAGCGCCTCA
ATTTGAGAGATGCTGCGGTTTACGGCCAAGTTCCGCCCCCAGCAGAACTTCTCGGAGATGCACTGTACGGCTTGGTTTAC
ACCCTTTTGCTGCTGATTCTGGCAGTGTTGGTGTTCGCCCGGCGTGAGTTCTGA

Upstream 100 bases:

>100_bases
GGGCGTAGGTGAATCTGAATCTGGGCCTGGAACTGCATAGAATAAAGGCTGGATCTGTTACCAGTGTATCAGTCGGATCA
TCACAGCTTTGGGTTCAGTC

Downstream 100 bases:

>100_bases
CGTTACCTCTTCCCCCATGCGTTTTTTCCACTTCTATACGCCCGAACAGGTGCCTTCATCTGGGATCCCGGAGTGTGCGG
TGGCCATTGATGTGCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDASRVVAIAHNVFRETIRDRILYLVMVFAVAMLGATVLIPQVANQAHNKIIADLGLAAIHFFGLIVAIFVGTGLVNKEI
ERRTVYVLIAKPMSRAEFIVGKHLGLSALLSVLVLLMTVVFLLSLLLVQAPIPLLAILWATVFTFLELVLIVAAALLFGV
FTSSILATLYTIALFLMGHASRALLQLSKLVKDAGFGKLFEVIYLILPDLERLNLRDAAVYGQVPPPAELLGDALYGLVY
TLLLLILAVLVFARREF

Sequences:

>Translated_257_residues
MDASRVVAIAHNVFRETIRDRILYLVMVFAVAMLGATVLIPQVANQAHNKIIADLGLAAIHFFGLIVAIFVGTGLVNKEI
ERRTVYVLIAKPMSRAEFIVGKHLGLSALLSVLVLLMTVVFLLSLLLVQAPIPLLAILWATVFTFLELVLIVAAALLFGV
FTSSILATLYTIALFLMGHASRALLQLSKLVKDAGFGKLFEVIYLILPDLERLNLRDAAVYGQVPPPAELLGDALYGLVY
TLLLLILAVLVFARREF
>Mature_257_residues
MDASRVVAIAHNVFRETIRDRILYLVMVFAVAMLGATVLIPQVANQAHNKIIADLGLAAIHFFGLIVAIFVGTGLVNKEI
ERRTVYVLIAKPMSRAEFIVGKHLGLSALLSVLVLLMTVVFLLSLLLVQAPIPLLAILWATVFTFLELVLIVAAALLFGV
FTSSILATLYTIALFLMGHASRALLQLSKLVKDAGFGKLFEVIYLILPDLERLNLRDAAVYGQVPPPAELLGDALYGLVY
TLLLLILAVLVFARREF

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28106; Mature: 28106

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASRVVAIAHNVFRETIRDRILYLVMVFAVAMLGATVLIPQVANQAHNKIIADLGLAAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFFGLIVAIFVGTGLVNKEIERRTVYVLIAKPMSRAEFIVGKHLGLSALLSVLVLLMTVV
HHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FLLSLLLVQAPIPLLAILWATVFTFLELVLIVAAALLFGVFTSSILATLYTIALFLMGHA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRALLQLSKLVKDAGFGKLFEVIYLILPDLERLNLRDAAVYGQVPPPAELLGDALYGLVY
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHH
TLLLLILAVLVFARREF
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDASRVVAIAHNVFRETIRDRILYLVMVFAVAMLGATVLIPQVANQAHNKIIADLGLAAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFFGLIVAIFVGTGLVNKEIERRTVYVLIAKPMSRAEFIVGKHLGLSALLSVLVLLMTVV
HHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FLLSLLLVQAPIPLLAILWATVFTFLELVLIVAAALLFGVFTSSILATLYTIALFLMGHA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRALLQLSKLVKDAGFGKLFEVIYLILPDLERLNLRDAAVYGQVPPPAELLGDALYGLVY
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHH
TLLLLILAVLVFARREF
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA