| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607766
Identifier: 86607766
GI number: 86607766
Start: 281683
End: 283410
Strand: Direct
Name: 86607766
Synonym: CYB_0267
Alternate gene names: NA
Gene position: 281683-283410 (Clockwise)
Preceding gene: 86607765
Following gene: 86607767
Centisome position: 9.25
GC content: 59.38
Gene sequence:
>1728_bases ATGAGGACTTTTCCTTCGCCGGAGGCGCTGCGTCGGCTGCCAGCGGGGGCTGCCGATGGGGCCATCATTCTGGGCACGTT GGTTCTCCTGGCCTTGGTGGCGCAGGTGGGGGTAGGGGCTTTTGAGCGGTTTCAGCCCCCGGCGGTGGTGCCCCGGATCG ACTTGGATCCGCGCAACCTGCCCTACTATGCGGCCCGCTCCACCTTGCGCATGTTCATTGCCTTGGCCTTTTCCACCCTT TTTACCTTGATCTATGGCTACATTGCTGCCAAAAGTCGCTGGGCCGAGCGCATTTTGATCCCTCTGTTGGATGTCTTGCA ATCGGTGCCGGTGTTGGGATTTCTCTCCATTACGGTTACCGGTTTCATTGCTCTGTTTCCTGGCAGCTTGCTGGGGCTGG AGGCGGCTTCTATCTTTGCCATCTTCACCAGCCAAGTCTGGAACATGACCTTTTCCTTCTACCAATCCCTGCGCACGCTG CCTCAAGAGTTGGTGGAAGCGGCTACCTTGTATCGCCTGTCGGGGTGGCAGCGCTTTACCCAGTTGGAAGTGCCGGCGGC AATGGTGGGCCTCATCTGGAACGCCATGATGAGCTTTGGCGGAGGGTGGTTCTTTGTGGCAGCCAGCGAAGCCATCAGCG TGCTCAACCAGGAATACACGCTGCCGGGCCTGGGATCCTATGTGGAAGCGGCCGTCCAGGCGGAGGATCTGCCCAAGCTG GGCTGGGCGCTCTTGACCATGGCTGGGGTCATCCTGCTGGTGGATCAGCTTTTCTGGCGACCTTTGGTGGCTTGGTCGGA TAAGTTTCGCCTGGAACAGAGCAGCGGGGCTGCTGCCCCCGAATCCTGGCTGTACGATCTGCTGACCACGGCGCGGATCC CGCGGCTGATCGGCAGTTGGCTGTCCCCCTTGGCAGAGTTGGTGGATCGGCTGTTGTCCTATCTGACTCGCCCGCACTGG GTGGATCCCCTCAGTCCTGAGGCCGAGCGACGCCGCGAGCGGCTGCTAACCCAGCTTTCCCGGGCAGCTATTGGCGGCAT TGGGATTTGGATTGTTTATTTTGTGGCTACCACTGTGGGCTTTGGAGAGGTGATGCTGACCTTCGGGCTAGGGATCCTCA CCCTGCTGCGGGTTAGCGTGTTGCTGGTGTTCGCCACGGTGATCTGGACTCCCATTGGGGTGGCCATTGGCTTTAATCCA AAACTGGCGAAACTGCTGCAGCCGGTGGTGCAATTCCTGGCAGCTTTCCCGGCCAATTTCCTCTTTCCTTTTGCCACGTT GTTTTTTATCCGCGCCCAGATCAGCATTGAGTGGGGCAGCATTTTGCTCATGTCGTTGGGGGCACAGTGGTACATCCTTT TCAACTCCATTGCCGGTGCCCAAAGCATCCCCACGGACTTGCGAGAAATGGCCGTGGATGTGGGCCTGCGGGGATGGCAG CGCTGGCGAAAGCTGATCATTCCAGGGATCTTTTCCGCCTGGGTCACCGGGGGAGTCACGGCCAGCGGCGGCGCTTGGAA CGCCAGCATTGTCTCGGAGATTGTGGCCTGGGGATCCACCACCCTGACGGCTACGGGGTTGGGCACCTACATTGCTGAGG CAACGGCGGTGGGAGACTGGCCCCGCATTACCTTGGGCATTGGCATGATGAGCTTGTTTGTGGTGGGCATTAACCGTCTG TTCTGGCGACGGCTGTATCAGTTGGCGGAAGAAAAGTATCACCTTTAG
Upstream 100 bases:
>100_bases AAGGAATCTCCCCCTGAGTTGCCAGAAGAGTAGCCGGCTGGATCCTGGCTAACCGCAAACGGTGTACACTGGGCGCGGAT GCCGGGCTTGGTCAGGGAAG
Downstream 100 bases:
>100_bases TCTTTTCAATTTCTGAGGCAATATGAGCTCTGCAGCTTCCCCCGTTTTGATCGAGGTCGAGAAAGTCTACAAGCGCTTTC CTTTGCCAGAGGGCAAGGGG
Product: taurine ABC transporter permease protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; Anion Transporter Permease Protein; Nitrate ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Transmembrane Permease Protein; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; Sugar ABC Transporter 1 Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MRTFPSPEALRRLPAGAADGAIILGTLVLLALVAQVGVGAFERFQPPAVVPRIDLDPRNLPYYAARSTLRMFIALAFSTL FTLIYGYIAAKSRWAERILIPLLDVLQSVPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTL PQELVEAATLYRLSGWQRFTQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKL GWALLTMAGVILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLLTTARIPRLIGSWLSPLAELVDRLLSYLTRPHW VDPLSPEAERRRERLLTQLSRAAIGGIGIWIVYFVATTVGFGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNP KLAKLLQPVVQFLAAFPANFLFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGWQ RWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAWGSTTLTATGLGTYIAEATAVGDWPRITLGIGMMSLFVVGINRL FWRRLYQLAEEKYHL
Sequences:
>Translated_575_residues MRTFPSPEALRRLPAGAADGAIILGTLVLLALVAQVGVGAFERFQPPAVVPRIDLDPRNLPYYAARSTLRMFIALAFSTL FTLIYGYIAAKSRWAERILIPLLDVLQSVPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTL PQELVEAATLYRLSGWQRFTQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKL GWALLTMAGVILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLLTTARIPRLIGSWLSPLAELVDRLLSYLTRPHW VDPLSPEAERRRERLLTQLSRAAIGGIGIWIVYFVATTVGFGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNP KLAKLLQPVVQFLAAFPANFLFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGWQ RWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAWGSTTLTATGLGTYIAEATAVGDWPRITLGIGMMSLFVVGINRL FWRRLYQLAEEKYHL >Mature_575_residues MRTFPSPEALRRLPAGAADGAIILGTLVLLALVAQVGVGAFERFQPPAVVPRIDLDPRNLPYYAARSTLRMFIALAFSTL FTLIYGYIAAKSRWAERILIPLLDVLQSVPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTL PQELVEAATLYRLSGWQRFTQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKL GWALLTMAGVILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLLTTARIPRLIGSWLSPLAELVDRLLSYLTRPHW VDPLSPEAERRRERLLTQLSRAAIGGIGIWIVYFVATTVGFGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNP KLAKLLQPVVQFLAAFPANFLFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGWQ RWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAWGSTTLTATGLGTYIAEATAVGDWPRITLGIGMMSLFVVGINRL FWRRLYQLAEEKYHL
Specific function: Unknown
COG id: COG4986
COG function: function code P; ABC-type anion transport system, duplicated permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63338; Mature: 63338
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFPSPEALRRLPAGAADGAIILGTLVLLALVAQVGVGAFERFQPPAVVPRIDLDPRNL CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC PYYAARSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDVLQSVPVLGFLSITVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAATLYRLSGWQRFT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKL HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH GWALLTMAGVILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLLTTARIPRLIGSW HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH LSPLAELVDRLLSYLTRPHWVDPLSPEAERRRERLLTQLSRAAIGGIGIWIVYFVATTVG HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNPKLAKLLQPVVQFLAAFPANF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCHHH LFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGWQ HHHHHHHHHHHHHHEECHHHHHHHHHCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHH RWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAWGSTTLTATGLGTYIAEATAVGDW HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCC PRITLGIGMMSLFVVGINRLFWRRLYQLAEEKYHL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTFPSPEALRRLPAGAADGAIILGTLVLLALVAQVGVGAFERFQPPAVVPRIDLDPRNL CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC PYYAARSTLRMFIALAFSTLFTLIYGYIAAKSRWAERILIPLLDVLQSVPVLGFLSITVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTLPQELVEAATLYRLSGWQRFT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISVLNQEYTLPGLGSYVEAAVQAEDLPKL HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH GWALLTMAGVILLVDQLFWRPLVAWSDKFRLEQSSGAAAPESWLYDLLTTARIPRLIGSW HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH LSPLAELVDRLLSYLTRPHWVDPLSPEAERRRERLLTQLSRAAIGGIGIWIVYFVATTVG HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGEVMLTFGLGILTLLRVSVLLVFATVIWTPIGVAIGFNPKLAKLLQPVVQFLAAFPANF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCHHH LFPFATLFFIRAQISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGWQ HHHHHHHHHHHHHHEECHHHHHHHHHCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHH RWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEIVAWGSTTLTATGLGTYIAEATAVGDW HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCC PRITLGIGMMSLFVVGINRLFWRRLYQLAEEKYHL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA