| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is gloB [H]
Identifier: 86607653
GI number: 86607653
Start: 166156
End: 166914
Strand: Direct
Name: gloB [H]
Synonym: CYB_0151
Alternate gene names: 86607653
Gene position: 166156-166914 (Clockwise)
Preceding gene: 86607652
Following gene: 86607661
Centisome position: 5.45
GC content: 62.06
Gene sequence:
>759_bases ATGCGCGTTCTCCAGTTGCCTGCCCTGCGCGATAACTACATCTACCTGCTCCACAATCCCGACACTGCAACAGCAGCCGT GGTGGATCCGGCAGTGGCTGAGCCCGTGTTGGAAAAGCTGGCCGAGCTGGGGGCGGAGTTGGTGGCCATTTTCAACACCC ACCACCACCACGACCACGTGGGGGGCAACCGACAGCTTTTGGAGCGCTATCCCCGTGCCAGAGTCTATGGCAGCCAGGTG GATCGGGGGCGGATCCCTGGCCAGACGGTGGAGCTCAAGGCAGGGGAAACAGTGGAGTTTGCGGGTCGGCTAGCAAAGGT GCTGTTTGTGCCCGGCCATACCCGCGGCCATATTGCCTACTACTTTTCCGAGAGTGGGGATCTCTTCTGTGGCGATACCC TGTTTGCCGGGGGATGCGGGCGGCTGTTTGAAGGCACGCCGGAGCAGATGGTGGGATCCCTGGATCAACTGCGGCAGTTG CCGGAAGCCACACGGGTGTGGTGTGCCCACGAATACACCTTGAACAATCTCAGGTTTGCCCTGACAGTGGATGGAGACAA CCCCGACCTGCAGGCGCGTTATCAGCAGGTGGCTGCCCTGCGCCAGACGGGATCCCCGACTGTCCCCAGCACCATTGGCG AGGAACGCCGCACCAATCCCTTCTTGCGTTGGGATCAGCCGGCTTTGCAGGCAGCCACCGGGCTCCAGGATCCGGTGCGG GTCTTCGCTCGCCTGCGCGGTATGAAGGATCAGTTCTGA
Upstream 100 bases:
>100_bases CGATACACCTACCCAGACGGCAACACGAAAACTTTATCTTTTCCCTATTCCCTCAGCCGGCAAGACGTAGAACAGGCCAT TTTTGAGAGTTAGCCGAGCC
Downstream 100 bases:
>100_bases AAATCGGGTTCTGACAAAAGCTCCTGGAGGTGGCCCAAAACCTGAGGGGATGGTGCTCCTCACCACTAGCACAAACGAAA CCCCCGAAGAGCTGCACCGT
Product: glyoxalase II family protein
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MRVLQLPALRDNYIYLLHNPDTATAAVVDPAVAEPVLEKLAELGAELVAIFNTHHHHDHVGGNRQLLERYPRARVYGSQV DRGRIPGQTVELKAGETVEFAGRLAKVLFVPGHTRGHIAYYFSESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLDQLRQL PEATRVWCAHEYTLNNLRFALTVDGDNPDLQARYQQVAALRQTGSPTVPSTIGEERRTNPFLRWDQPALQAATGLQDPVR VFARLRGMKDQF
Sequences:
>Translated_252_residues MRVLQLPALRDNYIYLLHNPDTATAAVVDPAVAEPVLEKLAELGAELVAIFNTHHHHDHVGGNRQLLERYPRARVYGSQV DRGRIPGQTVELKAGETVEFAGRLAKVLFVPGHTRGHIAYYFSESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLDQLRQL PEATRVWCAHEYTLNNLRFALTVDGDNPDLQARYQQVAALRQTGSPTVPSTIGEERRTNPFLRWDQPALQAATGLQDPVR VFARLRGMKDQF >Mature_252_residues MRVLQLPALRDNYIYLLHNPDTATAAVVDPAVAEPVLEKLAELGAELVAIFNTHHHHDHVGGNRQLLERYPRARVYGSQV DRGRIPGQTVELKAGETVEFAGRLAKVLFVPGHTRGHIAYYFSESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLDQLRQL PEATRVWCAHEYTLNNLRFALTVDGDNPDLQARYQQVAALRQTGSPTVPSTIGEERRTNPFLRWDQPALQAATGLQDPVR VFARLRGMKDQF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=258, Percent_Identity=39.922480620155, Blast_Score=191, Evalue=6e-49, Organism=Homo sapiens, GI94538322, Length=258, Percent_Identity=39.922480620155, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI14150041, Length=257, Percent_Identity=38.9105058365759, Blast_Score=168, Evalue=5e-42, Organism=Homo sapiens, GI116642887, Length=239, Percent_Identity=41.8410041841004, Blast_Score=161, Evalue=6e-40, Organism=Homo sapiens, GI21703352, Length=239, Percent_Identity=41.8410041841004, Blast_Score=161, Evalue=6e-40, Organism=Homo sapiens, GI46361987, Length=204, Percent_Identity=39.2156862745098, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI41327741, Length=169, Percent_Identity=29.585798816568, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786406, Length=256, Percent_Identity=44.921875, Blast_Score=190, Evalue=8e-50, Organism=Escherichia coli, GI1787158, Length=175, Percent_Identity=28, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17536925, Length=252, Percent_Identity=37.6984126984127, Blast_Score=169, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17538952, Length=165, Percent_Identity=29.0909090909091, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320478, Length=265, Percent_Identity=32.4528301886792, Blast_Score=117, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324614, Length=245, Percent_Identity=33.8775510204082, Blast_Score=99, Evalue=5e-22, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=44.2307692307692, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI21356335, Length=260, Percent_Identity=44.2307692307692, Blast_Score=206, Evalue=8e-54, Organism=Drosophila melanogaster, GI24667703, Length=260, Percent_Identity=44.2307692307692, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI221330176, Length=169, Percent_Identity=31.9526627218935, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28043; Mature: 28043
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLQLPALRDNYIYLLHNPDTATAAVVDPAVAEPVLEKLAELGAELVAIFNTHHHHDHV CCEEECCCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GGNRQLLERYPRARVYGSQVDRGRIPGQTVELKAGETVEFAGRLAKVLFVPGHTRGHIAY CCCHHHHHHCCCHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHEEEEECCCCCCCEEEE YFSESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLDQLRQLPEATRVWCAHEYTLNNLRFA EEECCCCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHCHHHHHHHHHEEEEECCEEEE LTVDGDNPDLQARYQQVAALRQTGSPTVPSTIGEERRTNPFLRWDQPALQAATGLQDPVR EEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCEECCCHHHHHHHCCCHHHH VFARLRGMKDQF HHHHHHCCCCCC >Mature Secondary Structure MRVLQLPALRDNYIYLLHNPDTATAAVVDPAVAEPVLEKLAELGAELVAIFNTHHHHDHV CCEEECCCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GGNRQLLERYPRARVYGSQVDRGRIPGQTVELKAGETVEFAGRLAKVLFVPGHTRGHIAY CCCHHHHHHCCCHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHEEEEECCCCCCCEEEE YFSESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLDQLRQLPEATRVWCAHEYTLNNLRFA EEECCCCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHCHHHHHHHHHEEEEECCEEEE LTVDGDNPDLQARYQQVAALRQTGSPTVPSTIGEERRTNPFLRWDQPALQAATGLQDPVR EEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCEECCCHHHHHHHCCCHHHH VFARLRGMKDQF HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA