Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607641

Identifier: 86607641

GI number: 86607641

Start: 153600

End: 154037

Strand: Direct

Name: 86607641

Synonym: CYB_0139

Alternate gene names: NA

Gene position: 153600-154037 (Clockwise)

Preceding gene: 86607640

Following gene: 86607642

Centisome position: 5.04

GC content: 60.27

Gene sequence:

>438_bases
ATGCCCATCTATACCCAGTCAATTCCGATTGCGGCCAGCGTGGCCCAGGTGGATCGCTGCCTCACCGACCTGGAGTTGAT
GAAGCGCTGGCTCAACCCGCTGTTGGGCTGTGAGGCGGTGGGATCCCCTCTGGCGGAATTGGGCAGCCGCTACCGCTTTT
TCCTTCGCTTGCCGTTTGTATCCCCCAGCTTGGATTGCGTGATTACAGAGCGGGCAGAAGGCTTGGTGCAGTGGCAGTTT
AAGGGATTTTTTGAAGGAACCGACCGCTGGGAATGCCATCCCCAGCCGGGGGGTACCCTTCTAGTCAATTGCTTCAACTT
CCGCATCCCCAGTCCCTGGGTGGCGGCAGGGTTTTACCTGTTGGCAGCAGGGCCGACCCAGCAGGATATGCGGGCCCAGC
TCCGACGGCTGAAGGCAGTGGCCGAGGCTTTGGGTTAG

Upstream 100 bases:

>100_bases
AATATCGCGATATCTTGATTTTGCTGAGCACCGTATCCCCCTCTGCCACGGCAGAAGACCTCTCTGCGGCCAAGCTCGCT
CCCCCAACTTCCCCCTGAGG

Downstream 100 bases:

>100_bases
GCTGGTGGCAAGTAGTAAAGAAACGTAAAAAACTGCAATGACCAGCAACAGCGGACTGTTTAACCGTCGCTTTGCCGACA
ACTTCATCCCCCAACCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFVSPSLDCVITERAEGLVQWQF
KGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYLLAAGPTQQDMRAQLRRLKAVAEALG

Sequences:

>Translated_145_residues
MPIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFVSPSLDCVITERAEGLVQWQF
KGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYLLAAGPTQQDMRAQLRRLKAVAEALG
>Mature_144_residues
PIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFVSPSLDCVITERAEGLVQWQFK
GFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYLLAAGPTQQDMRAQLRRLKAVAEALG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16217; Mature: 16086

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHEEEEEEECCC
SPSLDCVITERAEGLVQWQFKGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYL
CCCCCEEEECCCCCEEEEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCHHHHCEEE
LAAGPTQQDMRAQLRRLKAVAEALG
EECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHEEEEEEECCC
SPSLDCVITERAEGLVQWQFKGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYL
CCCCCEEEECCCCCEEEEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCHHHHCEEE
LAAGPTQQDMRAQLRRLKAVAEALG
EECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA