| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607641
Identifier: 86607641
GI number: 86607641
Start: 153600
End: 154037
Strand: Direct
Name: 86607641
Synonym: CYB_0139
Alternate gene names: NA
Gene position: 153600-154037 (Clockwise)
Preceding gene: 86607640
Following gene: 86607642
Centisome position: 5.04
GC content: 60.27
Gene sequence:
>438_bases ATGCCCATCTATACCCAGTCAATTCCGATTGCGGCCAGCGTGGCCCAGGTGGATCGCTGCCTCACCGACCTGGAGTTGAT GAAGCGCTGGCTCAACCCGCTGTTGGGCTGTGAGGCGGTGGGATCCCCTCTGGCGGAATTGGGCAGCCGCTACCGCTTTT TCCTTCGCTTGCCGTTTGTATCCCCCAGCTTGGATTGCGTGATTACAGAGCGGGCAGAAGGCTTGGTGCAGTGGCAGTTT AAGGGATTTTTTGAAGGAACCGACCGCTGGGAATGCCATCCCCAGCCGGGGGGTACCCTTCTAGTCAATTGCTTCAACTT CCGCATCCCCAGTCCCTGGGTGGCGGCAGGGTTTTACCTGTTGGCAGCAGGGCCGACCCAGCAGGATATGCGGGCCCAGC TCCGACGGCTGAAGGCAGTGGCCGAGGCTTTGGGTTAG
Upstream 100 bases:
>100_bases AATATCGCGATATCTTGATTTTGCTGAGCACCGTATCCCCCTCTGCCACGGCAGAAGACCTCTCTGCGGCCAAGCTCGCT CCCCCAACTTCCCCCTGAGG
Downstream 100 bases:
>100_bases GCTGGTGGCAAGTAGTAAAGAAACGTAAAAAACTGCAATGACCAGCAACAGCGGACTGTTTAACCGTCGCTTTGCCGACA ACTTCATCCCCCAACCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFVSPSLDCVITERAEGLVQWQF KGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYLLAAGPTQQDMRAQLRRLKAVAEALG
Sequences:
>Translated_145_residues MPIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFVSPSLDCVITERAEGLVQWQF KGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYLLAAGPTQQDMRAQLRRLKAVAEALG >Mature_144_residues PIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFVSPSLDCVITERAEGLVQWQFK GFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYLLAAGPTQQDMRAQLRRLKAVAEALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16217; Mature: 16086
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHEEEEEEECCC SPSLDCVITERAEGLVQWQFKGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYL CCCCCEEEECCCCCEEEEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCHHHHCEEE LAAGPTQQDMRAQLRRLKAVAEALG EECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PIYTQSIPIAASVAQVDRCLTDLELMKRWLNPLLGCEAVGSPLAELGSRYRFFLRLPFV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHEEEEEEECCC SPSLDCVITERAEGLVQWQFKGFFEGTDRWECHPQPGGTLLVNCFNFRIPSPWVAAGFYL CCCCCEEEECCCCCEEEEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCHHHHCEEE LAAGPTQQDMRAQLRRLKAVAEALG EECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA