Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607541

Identifier: 86607541

GI number: 86607541

Start: 49091

End: 49687

Strand: Direct

Name: 86607541

Synonym: CYB_0039

Alternate gene names: NA

Gene position: 49091-49687 (Clockwise)

Preceding gene: 86607540

Following gene: 86607542

Centisome position: 1.61

GC content: 52.26

Gene sequence:

>597_bases
TTGGAGAGGGAAGTTGATGGCCGCTGCTCCGGTTCAGGTAGTTCCAACCGATCTCCCAATGGAGGAGCGGGTCTTGCCCT
GCCCAAAACCCTTGCCGACTGTCTGGCCAACCCAGTTGCTCCAACCAAATGGGTAGATGGCTACATTGTGGAGAAAGTGG
GGCAAACCTTAGGGCATGCAAAGATCCAAACCCGACTTCTCTTCCGTTGGCTCGGTTATGTTGAATGTCTGCCATTGGGG
GGTATGGTTTTGGTGAAGGCTCCCTGCCAAACGACAGGCAAAGTCAGAAGACCTGATGTTGCCTACCTGTCTCCAGATTT
AATCCAGCAATTTGGAGAGGATATTGCCACTTTGCCGCAGAGCTATCCCCTCACCGGAGAGATCCTCTCCCCAACCGACT
CTGGAGAGGACATTTTCTTGAAAGCCCAGGAGTATCTCAGCTCCGGTGCGCTGGAAGTCTGGCTGGTTTTTCCCAAAAGC
AAATTTATTTTTATCCAGACTCAGGATCGCCACCTTTGGCTAACCGAACAAGAGACTGCCAAAAGCCAGGTTGTATTGCC
CGGATTTGAGATCCAAGTGGCCGATCTCCTCGGCTGA

Upstream 100 bases:

>100_bases
TTATGGAAATGCCTGAGTTCTACGAATTGCGTAACCGCGCCCTTGACTTCCTCTATCGCCGCTTTGCCCATGGAGGGGAT
TGAGCTAGGGTTCAAAATAC

Downstream 100 bases:

>100_bases
GAGATCCTTAACCTGATGGCCTATCGGGATCCAAAATGCAAGACACTTATCCATCCTGACAGGGATCCCCACTCATGGTG
ACCGCGATGGAGCCGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEREVDGRCSGSGSSNRSPNGGAGLALPKTLADCLANPVAPTKWVDGYIVEKVGQTLGHAKIQTRLLFRWLGYVECLPLG
GMVLVKAPCQTTGKVRRPDVAYLSPDLIQQFGEDIATLPQSYPLTGEILSPTDSGEDIFLKAQEYLSSGALEVWLVFPKS
KFIFIQTQDRHLWLTEQETAKSQVVLPGFEIQVADLLG

Sequences:

>Translated_198_residues
MEREVDGRCSGSGSSNRSPNGGAGLALPKTLADCLANPVAPTKWVDGYIVEKVGQTLGHAKIQTRLLFRWLGYVECLPLG
GMVLVKAPCQTTGKVRRPDVAYLSPDLIQQFGEDIATLPQSYPLTGEILSPTDSGEDIFLKAQEYLSSGALEVWLVFPKS
KFIFIQTQDRHLWLTEQETAKSQVVLPGFEIQVADLLG
>Mature_198_residues
MEREVDGRCSGSGSSNRSPNGGAGLALPKTLADCLANPVAPTKWVDGYIVEKVGQTLGHAKIQTRLLFRWLGYVECLPLG
GMVLVKAPCQTTGKVRRPDVAYLSPDLIQQFGEDIATLPQSYPLTGEILSPTDSGEDIFLKAQEYLSSGALEVWLVFPKS
KFIFIQTQDRHLWLTEQETAKSQVVLPGFEIQVADLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21620; Mature: 21620

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREVDGRCSGSGSSNRSPNGGAGLALPKTLADCLANPVAPTKWVDGYIVEKVGQTLGHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHH
KIQTRLLFRWLGYVECLPLGGMVLVKAPCQTTGKVRRPDVAYLSPDLIQQFGEDIATLPQ
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC
SYPLTGEILSPTDSGEDIFLKAQEYLSSGALEVWLVFPKSKFIFIQTQDRHLWLTEQETA
CCCCCCCEECCCCCCCEEEEEEHHHHCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCC
KSQVVLPGFEIQVADLLG
CCEEECCCCEEEEHHHCC
>Mature Secondary Structure
MEREVDGRCSGSGSSNRSPNGGAGLALPKTLADCLANPVAPTKWVDGYIVEKVGQTLGHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHH
KIQTRLLFRWLGYVECLPLGGMVLVKAPCQTTGKVRRPDVAYLSPDLIQQFGEDIATLPQ
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC
SYPLTGEILSPTDSGEDIFLKAQEYLSSGALEVWLVFPKSKFIFIQTQDRHLWLTEQETA
CCCCCCCEECCCCCCCEEEEEEHHHHCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCC
KSQVVLPGFEIQVADLLG
CCEEECCCCEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA