Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is tar [C]

Identifier: 86606796

GI number: 86606796

Start: 2169520

End: 2170581

Strand: Reverse

Name: tar [C]

Synonym: CYA_2156

Alternate gene names: 86606796

Gene position: 2170581-2169520 (Counterclockwise)

Preceding gene: 86606798

Following gene: 86606795

Centisome position: 74.01

GC content: 60.83

Gene sequence:

>1062_bases
TTGGGTAACCTGGGGGCGCTGGAGCAAAAAGCCGTGGCCGCCCAGGAACGGGAGCGGTCGGAAGCGCTGCAAAGAGAGCT
GCTGCAGCTTATCAGCGAGGTCACAGAAGCCTCGCGGGGGGATCTCACGGTGCGGGCGCAGCTAACAGCCCGACAAGTTG
GCATCATGGCGGACTTTTTCAACGTCATTATCGAGAGCTTGCGCGACATCGTGATTCAAGTGCAGCAGGCCGCCGGTCAA
GTCAACCAATCGATTGGTCGTGACGAGGCAGCCATTCGCGAGTTGGCCGAAGCCGCTCTCCGACAGGCCACCCAAATCGA
AGAGACCTTGCGCTCTGTCGAGCAAATGACGCTCTCAATCGAGGAGGTAGCCGATAAAGCCCAACAGGCCGCCACCGTTG
CCGAATCTGCCGCCGCCACGGCCATCAACAGCAGCTTGACTATGGATCGCACAGTGCAAAACATCCTGCAACTGCGGGAA
ACGGTGGCCGAAACGGCCAAGAAGGTGAAGCGGCTGGGGGAATCTTCCCAGCAGATTTCCAAGGTGGTGTCCTTGATCAA
CCAGATTGCGCTGAAAACCAACCTCTTGGCGGTGAACGCCAGTATCGAGGCAGCCCGTGCCGGCGAAGAAGGGCGAGGTT
TTGCGGTGGTCGCCGAGGAAGTCGGGGCACTGGCGGCCCAGTCGGCAGAAGCCACCCGCGAGATCGAGCGCATTGTGGAA
GGGATCCAACGGGAAACCGGCGAGGTGGTACAGGCGATGGAAACCAGCACCGGCCAGGTGGTGGAGGGAACCCGCTTGGT
GGAAGCAGCCAAGCAGAGCCTGGGACAAATTGTGGAAGTCTCGCGGCAGGTGAACCAGCTCTTTCAGGCCATTGCCCGCT
CCACCGATGCCCAGGCAGATGCATCTCAAACGGTGCGCCAGTTGATGCAGCAAATCGCCAACATTGCCGCCCAGACGGCG
GCAGCCTCGCAGCAGGTGGCCAACTCTCTCCAGGCTACGGTGGCGGTTGCCCGTCAGTTGCAGACTTCTGTGTCCACCTT
CAAGGTGGGGGAGGCGGTTTAG

Upstream 100 bases:

>100_bases
CCGGCACTGACCCTACGGGTACAGTGCGGGGCTCCTGCGATTTCTAGCTGACGAAGAACAGAAAACCTTGGCAGAGCTGG
CCAACCGCCTGGGTCAAGCT

Downstream 100 bases:

>100_bases
CATAGGGCCGAATCCCACTTCCCTCGACCCACGCGAGTGGCAGGTTAGGCTGCAGTTTTTGGACGAAGCCCAGGCTTACC
TCGACACCCTGGAGGCAGGG

Product: methyl-accepting chemotaxis protein, truncation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MGNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFFNVIIESLRDIVIQVQQAAGQ
VNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRE
TVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE
GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTA
AASQQVANSLQATVAVARQLQTSVSTFKVGEAV

Sequences:

>Translated_353_residues
MGNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFFNVIIESLRDIVIQVQQAAGQ
VNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRE
TVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE
GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTA
AASQQVANSLQATVAVARQLQTSVSTFKVGEAV
>Mature_352_residues
GNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFFNVIIESLRDIVIQVQQAAGQV
NQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRET
VAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEG
IQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAA
ASQQVANSLQATVAVARQLQTSVSTFKVGEAV

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=278, Percent_Identity=32.3741007194245, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI2367378, Length=198, Percent_Identity=38.3838383838384, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1788194, Length=297, Percent_Identity=32.6599326599327, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1787690, Length=283, Percent_Identity=31.4487632508834, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=31.3868613138686, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003018
- InterPro:   IPR003660
- InterPro:   IPR016132 [H]

Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 37699; Mature: 37568

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
NVIIESLRDIVIQVQQAAGQVNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKKVKRLGESSQQIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE
HHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQAD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASQTVRQLMQQIANIAAQTAAASQQVANSLQATVAVARQLQTSVSTFKVGEAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
NVIIESLRDIVIQVQQAAGQVNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKKVKRLGESSQQIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE
HHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQAD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASQTVRQLMQQIANIAAQTAAASQQVANSLQATVAVARQLQTSVSTFKVGEAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]