| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is tar [C]
Identifier: 86606796
GI number: 86606796
Start: 2169520
End: 2170581
Strand: Reverse
Name: tar [C]
Synonym: CYA_2156
Alternate gene names: 86606796
Gene position: 2170581-2169520 (Counterclockwise)
Preceding gene: 86606798
Following gene: 86606795
Centisome position: 74.01
GC content: 60.83
Gene sequence:
>1062_bases TTGGGTAACCTGGGGGCGCTGGAGCAAAAAGCCGTGGCCGCCCAGGAACGGGAGCGGTCGGAAGCGCTGCAAAGAGAGCT GCTGCAGCTTATCAGCGAGGTCACAGAAGCCTCGCGGGGGGATCTCACGGTGCGGGCGCAGCTAACAGCCCGACAAGTTG GCATCATGGCGGACTTTTTCAACGTCATTATCGAGAGCTTGCGCGACATCGTGATTCAAGTGCAGCAGGCCGCCGGTCAA GTCAACCAATCGATTGGTCGTGACGAGGCAGCCATTCGCGAGTTGGCCGAAGCCGCTCTCCGACAGGCCACCCAAATCGA AGAGACCTTGCGCTCTGTCGAGCAAATGACGCTCTCAATCGAGGAGGTAGCCGATAAAGCCCAACAGGCCGCCACCGTTG CCGAATCTGCCGCCGCCACGGCCATCAACAGCAGCTTGACTATGGATCGCACAGTGCAAAACATCCTGCAACTGCGGGAA ACGGTGGCCGAAACGGCCAAGAAGGTGAAGCGGCTGGGGGAATCTTCCCAGCAGATTTCCAAGGTGGTGTCCTTGATCAA CCAGATTGCGCTGAAAACCAACCTCTTGGCGGTGAACGCCAGTATCGAGGCAGCCCGTGCCGGCGAAGAAGGGCGAGGTT TTGCGGTGGTCGCCGAGGAAGTCGGGGCACTGGCGGCCCAGTCGGCAGAAGCCACCCGCGAGATCGAGCGCATTGTGGAA GGGATCCAACGGGAAACCGGCGAGGTGGTACAGGCGATGGAAACCAGCACCGGCCAGGTGGTGGAGGGAACCCGCTTGGT GGAAGCAGCCAAGCAGAGCCTGGGACAAATTGTGGAAGTCTCGCGGCAGGTGAACCAGCTCTTTCAGGCCATTGCCCGCT CCACCGATGCCCAGGCAGATGCATCTCAAACGGTGCGCCAGTTGATGCAGCAAATCGCCAACATTGCCGCCCAGACGGCG GCAGCCTCGCAGCAGGTGGCCAACTCTCTCCAGGCTACGGTGGCGGTTGCCCGTCAGTTGCAGACTTCTGTGTCCACCTT CAAGGTGGGGGAGGCGGTTTAG
Upstream 100 bases:
>100_bases CCGGCACTGACCCTACGGGTACAGTGCGGGGCTCCTGCGATTTCTAGCTGACGAAGAACAGAAAACCTTGGCAGAGCTGG CCAACCGCCTGGGTCAAGCT
Downstream 100 bases:
>100_bases CATAGGGCCGAATCCCACTTCCCTCGACCCACGCGAGTGGCAGGTTAGGCTGCAGTTTTTGGACGAAGCCCAGGCTTACC TCGACACCCTGGAGGCAGGG
Product: methyl-accepting chemotaxis protein, truncation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MGNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFFNVIIESLRDIVIQVQQAAGQ VNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRE TVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTA AASQQVANSLQATVAVARQLQTSVSTFKVGEAV
Sequences:
>Translated_353_residues MGNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFFNVIIESLRDIVIQVQQAAGQ VNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRE TVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTA AASQQVANSLQATVAVARQLQTSVSTFKVGEAV >Mature_352_residues GNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFFNVIIESLRDIVIQVQQAAGQV NQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRET VAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEG IQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAA ASQQVANSLQATVAVARQLQTSVSTFKVGEAV
Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=278, Percent_Identity=32.3741007194245, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI2367378, Length=198, Percent_Identity=38.3838383838384, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1788194, Length=297, Percent_Identity=32.6599326599327, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1787690, Length=283, Percent_Identity=31.4487632508834, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=31.3868613138686, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 37699; Mature: 37568
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH NVIIESLRDIVIQVQQAAGQVNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSI HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKKVKRLGESSQQIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE HHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQAD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASQTVRQLMQQIANIAAQTAAASQQVANSLQATVAVARQLQTSVSTFKVGEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNLGALEQKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTARQVGIMADFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH NVIIESLRDIVIQVQQAAGQVNQSIGRDEAAIRELAEAALRQATQIEETLRSVEQMTLSI HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKKVKRLGESSQQIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVE HHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GIQRETGEVVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQAD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASQTVRQLMQQIANIAAQTAAASQQVANSLQATVAVARQLQTSVSTFKVGEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]